CX077919

Overview
NameCX077919
Unique NameCX077919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length777
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX077919 vs. ExPASy Swiss-Prot
Match: ATTY_DICDI (Tyrosine aminotransferase OS=Dictyostelium discoideum GN=tat PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.179e-11
Identity = 30/74 (40.54%), Postives = 46/74 (62.16%), Query Frame = 3 
Query:  156 IAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGV 377
            I + A++  + +IADE+Y  L FG   F PM      VP+L++G I+KR++VPGWRLGW+   D + I  +  +
Sbjct:  202 IIQVAREYCLPIIADEIYSDLTFGEHKFYPMASLTDKVPILSIGGIAKRFLVPGWRLGWVAIHDRDNIFSNGRI 275
[Close]
BLAST of CX077919 vs. ExPASy Swiss-Prot
Match: ATTY_BOVIN (Tyrosine aminotransferase OS=Bos taurus GN=TAT PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.642e-11
Identity = 26/68 (38.24%), Postives = 43/68 (63.24%), Query Frame = 3 
Query:  156 IAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI 359
            I   A +  + ++ADE+Y  + F ++ F P+    S VP+L+ G ++KRW+VPGWR+GW++  D   I
Sbjct:  226 ILAVAARQCVPILADEIYGDMVFSDSKFEPLATLSSKVPILSCGGLAKRWLVPGWRMGWILIHDRRDI 293
[Close]
BLAST of CX077919 vs. ExPASy Swiss-Prot
Match: ATTY_MOUSE (Tyrosine aminotransferase OS=Mus musculus GN=Tat PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.981e-11
Identity = 26/68 (38.24%), Postives = 43/68 (63.24%), Query Frame = 3 
Query:  156 IAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI 359
            I   A++  + ++ADE+Y  + F +  + PM    + VP+L+ G ++KRW+VPGWRLGW++  D   I
Sbjct:  233 ILAVAERQCVPILADEIYGDMVFSDCKYEPMATLSTNVPILSCGGLAKRWLVPGWRLGWILIHDRRDI 300
The following BLAST results are available for this feature:
BLAST of CX077919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ATTY_DICDI1.179e-1140.54Tyrosine aminotransferase OS=Dictyostelium discoid... [more]
ATTY_BOVIN7.642e-1138.24Tyrosine aminotransferase OS=Bos taurus GN=TAT PE=... [more]
ATTY_MOUSE9.981e-1138.24Tyrosine aminotransferase OS=Mus musculus GN=Tat P... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_5G11_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-5G11-M21-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077919 ID=CX077919; Name=CX077919; organism=Citrus sinensis; type=EST; length=777bp
GGGAAATGAAAATGTTAATGGCTATTGAGCGTTATTTTATTTAATGACTG
ACATTGCAATGCTTAGCCTTATTATTTAAAAGTTTTAAACCCATAAATTG
ATGGCTCTAAAGCTTCTGTAAGAATATTGGTGTTTGCTAATCCATTGAAT
ATTAGATTGCAGAGACAGCAAAAAAACTTGGGATAATGGTGATTGCAGAT
GAAGTTTACGACCATCTTGCATTTGGGAATACTCCTTTTGTACCAATGGG
AGTGTTTGGGTCAATTGTGCCTGTCCTTACACTTGGATCCATATCAAAGA
GATGGATAGTTCCTGGCTGGCGACTGGGTTGGCTTGTGACAAGTGATCCC
AATGGCATCCTTCAAGACTCAGGGGTAGCTTTCTTTCACTCTATCTCTCT
CAATATGAGGATGGGTGATTATCTTCTTTTAAGTGAAAGCGTCTATACTA
CTGTTGTAAGCCTACAACAGTGATCATGATCTGTTTTGGTTTGTACTTTC
TCAGATTGTTGATTCCATTAAGAGCTTTCTCAATATCTCCTCCGATCCTG
CAACATTCATTCAGGTTTGTGTTTATGATGCTTTTATCAAAGAACATGAT
TATATTGAAATAGAGTTACAAAGATTCATCCTGAACTTCTATAAAAGTTC
TCCATAAAAAATTAAGATAGTGAGTAACAATTATCTTTCACACTCTTAAG
TCTCAACTTTAAATTTTTGTTAAATTAATTCTCCTATTTTATGACATGTA
TCAAGTTAAGAGTTTCTTGAAAATGTC
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