CX077917

Overview
NameCX077917
Unique NameCX077917
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length582
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2882 contig Csv1_Contig2882:109..690. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX077917 vs. ExPASy Swiss-Prot
Match: ACOX2_ARATH (Acyl-coenzyme A oxidase 2, peroxisomal OS=Arabidopsis thaliana GN=ACX2 PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.438e-41
Identity = 78/92 (84.78%), Postives = 87/92 (94.57%), Query Frame = 1 
Query:   85 CPDPSSRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAFDLPDYVTRAPIARQSDAYAYYTQIVGF 360
            CPDPS++AALKL CDLYAL+RIW DIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRN+A EL+DAF+LPD+VTRAPIA QSDAY+ YTQ+VGF
Sbjct:  601 CPDPSAKAALKLACDLYALDRIWKDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNVAKELVDAFELPDHVTRAPIAMQSDAYSQYTQVVGF 692
[Close]
BLAST of CX077917 vs. ExPASy Swiss-Prot
Match: ACOX2_CUCMA (Acyl-coenzyme A oxidase, peroxisomal OS=Cucurbita maxima GN=Acx PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.139e-38
Identity = 74/92 (80.43%), Postives = 85/92 (92.39%), Query Frame = 1 
Query:   85 CPDPSSRAALKLVCDLYALNRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLSFQVRNIAGELIDAFDLPDYVTRAPIARQSDAYAYYTQIVGF 360
            CP+ +++A LKLVCDLYAL+RIWNDIGTYRNVDYVAPNKAKAIHKLTEYL FQVRNIA EL+DAFDLPD+VTRAPIA +S+AY+ YTQ +GF
Sbjct:  599 CPNANTQATLKLVCDLYALDRIWNDIGTYRNVDYVAPNKAKAIHKLTEYLCFQVRNIAQELVDAFDLPDHVTRAPIAMKSNAYSQYTQYIGF 690
The following BLAST results are available for this feature:
BLAST of CX077917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ACOX2_ARATH1.438e-4184.78Acyl-coenzyme A oxidase 2, peroxisomal OS=Arabidop... [more]
ACOX2_CUCMA1.139e-3880.43Acyl-coenzyme A oxidase, peroxisomal OS=Cucurbita ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_5G10_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-5G10-M19-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077917 ID=CX077917; Name=CX077917; organism=Citrus sinensis; type=EST; length=582bp
ACTTCCTAGTTTCAAGGTCATAAGTTCTTTTCTTTTTGCGTTATGATTCT
GATTTTCTAATCTAGCCATCATATATTCTCCAGCTGCCCTGATCCTAGCT
CTCGAGCTGCTCTGAAACTGGTCTGTGATCTTTATGCCTTGAACCGAATC
TGGAATGACATTGGAACATACCGTAATGTTGACTATGTGGCCCCTAACAA
GGCAAAGGCAATTCACAAGCTCACAGAATACTTGAGTTTCCAAGTGAGGA
ATATTGCTGGTGAACTTATAGATGCATTTGATCTTCCAGACTATGTTACA
AGGGCACCAATTGCTAGGCAATCGGATGCTTATGCTTATTACACACAGAT
TGTTGGATTCTGATATTCCTAGAGGAAGCAAAAGCAGTGATTTGGATACT
GTTGAAAACAAGTGCGGATGTAAAAACAGGGAGAATTTTTCTTTTTCTTT
ATCTTTGCATACATGAATAAGTTGTGAAAATTCAGGAAACCTTTAAATAT
TTTCTAGCGATATTGATTGATCCATCATCACTTTGTTAATAAGAGAAACT
ACATAGTGCTTGCTCCAAAAAAAAAAAAAAAA
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