EY736160

Overview
NameEY736160
Unique NameEY736160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length256
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4592 contig Csv1_Contig4592:422..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY736160 vs. ExPASy Swiss-Prot
Match: SF04_ARATH (Splicing factor 4-like protein OS=Arabidopsis thaliana GN=At3g52120 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.997e-12
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 3 
Query:   12 VTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 113
            V PEDDIYEQYKKRMMLGY++RPNPL NPRKAYY
Sbjct:  410 VKPEDDIYEQYKKRMMLGYKHRPNPLGNPRKAYY 443
The following BLAST results are available for this feature:
BLAST of EY736160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SF04_ARATH2.997e-1288.24Splicing factor 4-like protein OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-F09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736160 ID=EY736160; Name=EY736160; organism=Citrus sinensis; type=EST; length=256bp
CCACGCGTCCGGTGACTCCTGAGGATGATATATATGAACAGTATAAGAAG
CGGATGATGCTTGGTTATCGCTACAGACCCAATCCTCTGAACAATCCTAG
AAAGGCATACTACTGAGCTGCTGTGGCCTCTTTACGCAACCAGTCTTCTT
GTGTAGTCAACTTGGCTTTCAAATACGTTAGGTAACTTGCTTGTTATTTT
TAAGTGGAAAAAGAAAATTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAG
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