EY659713

Overview
NameEY659713
Unique NameEY659713
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length533
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2419 contig Csv1_Contig2419:138..670. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY659713 vs. ExPASy Swiss-Prot
Match: RFS1_ARATH (Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.253e-15
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = 3 
Query:   12 AINELRYESEGTA-TVDMKVRGCGEFGAYSSAR-PRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNI 221
            AI  LRY+ EGT   V MK+RG G  G YSS R PR + VDS++V++ YE ESGLVT TL VP++ELYLW++
Sbjct:  680 AIVSLRYDDEGTKFVVRMKLRGSGLVGVYSSVRRPRSVTVDSDDVEYRYEPESGLVTFTLGVPEKELYLWDV 751
[Close]
BLAST of EY659713 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.158e-12
Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 3 
Query:    9 PAINELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNI 221
            PA+++ R     TA V + VRGCG FGAYSS RP + AV+S E  F Y+ E GLVTL L V +EE++ W++
Sbjct:  702 PALSDNR---SPTALVSVSVRGCGRFGAYSSQRPLKCAVESTETDFTYDAEVGLVTLNLPVTREEMFRWHV 769
The following BLAST results are available for this feature:
BLAST of EY659713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
RFS1_ARATH4.253e-1558.33Probable galactinol--sucrose galactosyltransferase... [more]
RFS2_ARATH1.158e-1250.70Probable galactinol--sucrose galactosyltransferase... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-C07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659713 ID=EY659713; Name=EY659713; organism=Citrus sinensis; type=EST; length=533bp
CCACGCGTCCGGCTATTAATGAGCTGAGATATGAATCTGAGGGGACTGCA
ACTGTCGACATGAAAGTCCGTGGATGTGGCGAATTTGGAGCATATTCATC
AGCTCGACCCAGGAGAATAGCAGTTGATTCAGAGGAAGTGCAGTTTGGAT
ATGAAGAAGAATCTGGTTTGGTGACTCTCACTTTGAGAGTTCCAAAGGAA
GAATTGTACCTTTGGAACATATCATTTGAGCTGTAAGGCCTAGAACTTTT
GTACCACGTCTCATGATACTCTTGAGTTAGAGTTCTATTAATTTGTAGGA
GGAAAATGGTGGTAGCTTCTTCTTGTATTCATCATGGCATAAAATTAACA
TTAAGGAGACAATGGAGATAGTTTCTTCTCTGCTATCTTTCCTCTTCTCA
TCATGAAAGGGCTCTACCAGCCACTATCCGAAATGTCCTTCTAAGCATTT
AACTTATTTGGTTATTGTAGAATACCTATTAGTAATGAGAAAATAAGAAA
TCTAGAGGATTGTTGATTCATGTCCAGTTTTTC
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