DR908095
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908095 vs. ExPASy Swiss-Prot
Match: RN115_HUMAN (RING finger protein 115 OS=Homo sapiens GN=RNF115 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.789e-19 Identity = 47/129 (36.43%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 101 GDYFVGP-GLDLLLQHLAENDPNRYGTPPAQKEAVEAMPSVKIEET-----LQCSVCLDDFEIGTEAKEMPCKHKFHSQCILPWLELHSSCPVCRCQLPADEFKPESERSRNSSNHQREHEHHSSDHGT 469 GDY G GLD ++ L N G PPA KE + ++P+V + + L+C VC +D+ + E +++PC H FHS CI+PWLELH +CPVCR L ++ +S+ + S++++ ++ D T Sbjct: 176 GDYAWGQTGLDAIVTQLLGQLENT-GPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQSQSTEASASNRFSNDSQLHDRWT 303
BLAST of DR908095 vs. ExPASy Swiss-Prot
Match: RN115_MOUSE (RING finger protein 115 OS=Mus musculus GN=Rnf115 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19 Identity = 46/129 (35.66%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 101 GDYFVGP-GLDLLLQHLAENDPNRYGTPPAQKEAVEAMPSVKIEET-----LQCSVCLDDFEIGTEAKEMPCKHKFHSQCILPWLELHSSCPVCRCQLPADEFKPESERSRNSSNHQREHEHHSSDHGT 469 GDY G GLD ++ L N G PPA KE + ++P+V + + L+C VC +D+ + + +++PC H FHS CI+PWLELH +CPVCR L ++ +++ S S++++ ++ D T Sbjct: 177 GDYAWGQTGLDAIVTQLLGQLENT-GPPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQTQSSEASASNRFSNDSQLHDRWT 304
BLAST of DR908095 vs. ExPASy Swiss-Prot
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.800e-19 Identity = 49/121 (40.50%), Postives = 69/121 (57.02%), Query Frame = 2 Query: 92 GSLGDYFV-GPGLDLLLQHLAENDPN----RYGTPPAQKEAVEAMPSVKI-----EETLQCSVCLDDFEIGTEAKEMPCKHKFHSQCILPWLELHSSCPVCRCQLPADEFKPESERSRNSS 424 G+ DY G + LLQ+LAE D R G PPA K A+EA+ + ++ E + C+VC D +G K++PC H +H CI+PWL +SCPVCR QL D+ + E ER + +S Sbjct: 197 GNPADYIDDAAGYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEEERKKRTS 317
BLAST of DR908095 vs. ExPASy Swiss-Prot
Match: RN181_XENTR (E3 ubiquitin-protein ligase rnf181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.375e-18 Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 2 Query: 122 GLDLLLQHLAENDPNRYGTPPAQKEAVEAMPSVKI-----EETLQCSVCLDDFEIGTEAKEMPCKHKFHSQCILPWLELHSSCPVCRCQLPADEFKPESERSRNSSNHQREH 442 G+D+ L L + ++ PPA K+ VE++P V + + L+C VCL +FE G +++PC+H FHS CILPWL +SCP+CR +LP D + E + Q+EH Sbjct: 34 GMDIDLGALDFTEWDQRLPPPAAKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHELPTDSPEYEEYKQEKERRQQKEH 145
BLAST of DR908095 vs. ExPASy Swiss-Prot
Match: RN126_HUMAN (RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.375e-18 Identity = 44/97 (45.36%), Postives = 58/97 (59.79%), Query Frame = 2 Query: 104 DYFVGP-GLDLLLQHLAENDPNRYGTPPAQKEAVEAMPSVKIEET-----LQCSVCLDDFEIGTEAKEMPCKHKFHSQCILPWLELHSSCPVCRCQL 376 DY G GLD ++ L N G PPA KE ++A+P+V + E L+C VC DD+ +G +++PC H FH CI+PWLE H SCPVCR L Sbjct: 178 DYAWGANGLDAIITQLLNQFENT-GPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 273
BLAST of DR908095 vs. ExPASy Swiss-Prot
Match: RN126_BOVIN (RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.408e-18 Identity = 44/97 (45.36%), Postives = 58/97 (59.79%), Query Frame = 2 Query: 104 DYFVGP-GLDLLLQHLAENDPNRYGTPPAQKEAVEAMPSVKIEET-----LQCSVCLDDFEIGTEAKEMPCKHKFHSQCILPWLELHSSCPVCRCQL 376 DY G GLD ++ L N G PPA KE ++A+P+V + E L+C VC DD+ +G +++PC H FH CI+PWLE H SCPVCR L Sbjct: 181 DYAWGANGLDAIITQLLNQFENT-GPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 276
BLAST of DR908095 vs. ExPASy Swiss-Prot
Match: RN126_MOUSE (RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.757e-18 Identity = 43/97 (44.33%), Postives = 58/97 (59.79%), Query Frame = 2 Query: 104 DYFVGP-GLDLLLQHLAENDPNRYGTPPAQKEAVEAMPSVKIEET-----LQCSVCLDDFEIGTEAKEMPCKHKFHSQCILPWLELHSSCPVCRCQL 376 DY G GLD ++ L N G PPA KE ++A+P+V + E L+C VC +D+ +G +++PC H FH CI+PWLE H SCPVCR L Sbjct: 180 DYAWGANGLDTIITQLLNQFENT-GPPPADKEKIQALPTVPVTEEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSL 275
BLAST of DR908095 vs. ExPASy Swiss-Prot
Match: RN181_XENLA (E3 ubiquitin-protein ligase rnf181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.282e-17 Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = 2 Query: 122 GLDLLLQHLAENDPNRYGTPPAQKEAVEAMPSVKI-----EETLQCSVCLDDFEIGTEAKEMPCKHKFHSQCILPWLELHSSCPVCRCQLPADEFKPESERSRNSSNHQREH 442 G+D+ L + + ++ PPA K+ VE++P V + + L+C VCL +FE G +++PC+H FHS CILPWL +SCP+CR +LP D E + + Q+EH Sbjct: 34 GMDIDLGAVDFTEWDQRLPPPASKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLCRHELPTDSPDYEEFKQEKARRQQKEH 145
BLAST of DR908095 vs. ExPASy Swiss-Prot
Match: RN126_XENTR (RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.675e-17 Identity = 41/97 (42.27%), Postives = 59/97 (60.82%), Query Frame = 2 Query: 104 DYFVGP-GLDLLLQHLAENDPNRYGTPPAQKEAVEAMPSVKIEET-----LQCSVCLDDFEIGTEAKEMPCKHKFHSQCILPWLELHSSCPVCRCQL 376 DY G GLD ++ L N G PPA E ++A+P+++I E L+C VC +D+ +G +++PC H FH+ CI+PWLE H +CPVCR L Sbjct: 176 DYAWGANGLDTIITQLLNQFENT-GPPPADTEKIQALPTIQITEEHVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 271
BLAST of DR908095 vs. ExPASy Swiss-Prot
Match: RN181_DANRE (E3 ubiquitin-protein ligase rnf181 OS=Danio rerio GN=rnf181 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17 Identity = 50/117 (42.74%), Postives = 68/117 (58.12%), Query Frame = 2 Query: 122 GLDLLLQHLAENDPNRYGTPPAQKEAVEAMPSVKI-----EETLQCSVCLDDFEIGTEAKEMPCKHKFHSQCILPWLELHSSCPVCRCQLPAD-----EFKPESERSRNSSNHQREH 442 GLD+ +D ++ PPA K V+++P V I ++ ++C VCL +FE +EMPCKH FH+ CILPWL +SCP+CR +LP D EFK + ER R QREH Sbjct: 34 GLDIDSGSFDLSDWDQRLPPPAAKAVVQSLPVVIISPEQADKGVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNSCPLCRLELPTDNADYEEFKKDKERRR-----QREH 145 The following BLAST results are available for this feature:
BLAST of DR908095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908095 ID=DR908095; Name=DR908095; organism=Citrus sinensis; type=EST; length=726bpback to top |