DR406173

Overview
NameDR406173
Unique NameDR406173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6302 contig Csv1_Contig6302:1..721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB1_NAEGR (Calcineurin subunit B OS=Naegleria gruberi GN=CNB1 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.693e-25
Identity = 60/142 (42.25%), Postives = 97/142 (68.31%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            MGT +S L   ++EE+Q+  +  F+Q+EI  LY+RF +LD++  G IS DEFL +PE A+NPL +R++ + D      +NFK+F+A LSVF+A+   Q+K++  FKVYD D +G +S  ++  VL+ + G+ +SD Q +Q++
Sbjct:    1 MGTNTSSLRPEEVEEMQKGTN--FTQKEIKKLYKRFKKLDKDGNGTISKDEFLMIPELAVNPLVKRVISIFDENGDGSVNFKEFIAALSVFNAQGDKQRKLEFAFKVYDIDGDGYISNGELFTVLKMMVGNNLSDVQLQQIV 140          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB1_DICDI (Calcineurin subunit B type 1 OS=Dictyostelium discoideum GN=cnbA PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.414e-21
Identity = 47/142 (33.10%), Postives = 93/142 (65.49%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            MG   S+L +  +E+++ +  + FS+ E+  LY+RF  LD++  G ++ DEFLS+P+ A+NPL +R++++ D      + F +FV  L+  S K + + K++ +F++YD DC+G +S  ++ +VL+ + G+ ++D Q +Q++
Sbjct:    1 MGNQHSLLNKEQLEQMKDN--SSFSEAELKKLYRRFQMLDKDGSGTLTTDEFLSIPDLALNPLLERVIQIFDQNKDNEIEFFEFVGTLATLSHKGTKEDKLKFLFQIYDIDCDGFISNGELFQVLKMMVGTNLNDVQLQQIV 140          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB2_DICDI (Calcineurin subunit B type 2 OS=Dictyostelium discoideum GN=cnbB PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19
Identity = 52/142 (36.62%), Postives = 89/142 (62.68%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            MG + S L   +IEE+++   ++FSQ+EI  LY+RF +LD+  KG I+ ++F  +PE +MNP+  R++ + D      +NFK FV  LS F  KA    K++++FKVYD + +G ++ ++I  +L  + GS ++ EQ   ++
Sbjct:    1 MGVSRSTLRTEEIEEIREV--SIFSQREIKRLYKRFKRLDKEEKGSINVEDFNQIPELSMNPMLPRIISIFDVNRDGQVNFKQFVKSLSTFHPKADKADKIKILFKVYDINNDGFITRDEIETILTMMVGSNLTKEQISSIV 140          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB_ASHGO (Calcineurin subunit B OS=Ashbya gossypii GN=CNB1 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18
Identity = 48/142 (33.80%), Postives = 90/142 (63.38%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLN-----FKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            MG+A S + +  +++        F ++EI  L +RF +LDR++ G I  +EF+S+P  + NPL+ R++++ D  N     F++F++ LSVFS ++  ++K++  FK+YD D +G +S  ++  VL+ + G+ + DEQ +QV+
Sbjct:    1 MGSAPSKILEDLLDDTN------FDREEIERLRKRFMKLDRDSSGSIDKNEFMSIPGVSSNPLAGRIMEVFDADNSGDVDFQEFISGLSVFSGRSDKEEKLRFAFKIYDIDKDGYISNGELFIVLKIMVGNNLEDEQLQQVV 136          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB_YEAST (Calcineurin subunit B OS=Saccharomyces cerevisiae GN=CNB1 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 5.711e-18
Identity = 49/142 (34.51%), Postives = 85/142 (59.86%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLN-----FKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            MG A S +    +E+        F + EI  L +RF +LDR++ G I  +EF+S+P  + NPL+ R++++ D  N     F++F+  LS+FS + S  +K++  FK+YD D +G +S  ++  VL+ + GS + DEQ +Q++
Sbjct:    1 MGAAPSKIVDGLLEDTN------FDRDEIERLRKRFMKLDRDSSGSIDKNEFMSIPGVSSNPLAGRIMEVFDADNSGDVDFQEFITGLSIFSGRGSKDEKLRFAFKIYDIDKDGFISNGELFIVLKIMVGSNLDDEQLQQIV 136          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB_CANGA (Calcineurin subunit B OS=Candida glabrata GN=CNB1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.711e-18
Identity = 48/142 (33.80%), Postives = 86/142 (60.56%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLN-----FKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            MG A S + +  +E+        F + EI  L +RF +LDR++ G I  +EF+S+P  + NPL+ R++++ D  N     F++F+  LS+FS + S  +K++  FK+YD D +G +S  ++  VL+ + GS + D+Q +Q++
Sbjct:    1 MGAAPSKIVETLLEDTN------FDRDEIERLRKRFMKLDRDSSGSIDKNEFMSIPGVSANPLAGRIMEVFDADNSGDVDFQEFITGLSIFSGRGSKDEKLKFAFKIYDIDKDGLISNGELFIVLKIMVGSNLDDKQLQQIV 136          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB_NEUCR (Calcineurin subunit B OS=Neurospora crassa GN=cnb-1 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 44/119 (36.97%), Postives = 80/119 (67.23%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            F ++E+  L +RF +LD++  G I  +EFLS+P+ + NPL+ R++ + D      ++F++FV+ LS FS+K + +QK++  FKVYD D +G +S  ++  VL+ + GS + D+Q +Q++
Sbjct:   18 FDREEVDRLRKRFMKLDKDNSGTIEREEFLSLPQISTNPLATRMIAIFDEDGGGDVDFQEFVSGLSAFSSKGNKEQKLRFAFKVYDIDRDGYISNGELFIVLKMMVGSNLKDQQLQQIV 136          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB_CRYNE (Calcineurin subunit B OS=Cryptococcus neoformans GN=CNB1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18
Identity = 44/119 (36.97%), Postives = 76/119 (63.87%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            FS  E++ L +RF +LD++  G I  DEFL +P+ A NPL+ R++ + D      ++F++FV  LS FS+K    +K++  FKVYD D +G +S  ++  VL+ + G+ + D+Q +Q++
Sbjct:   18 FSGPELMRLKKRFMKLDKDGSGSIDKDEFLQIPQIANNPLAHRMIAIFDEDGSGTVDFQEFVGGLSAFSSKGGRDEKLRFAFKVYDMDRDGYISNGELYLVLKQMVGNNLKDQQLQQIV 136          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB_SCHPO (Calcineurin subunit B OS=Schizosaccharomyces pombe GN=cnb1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17
Identity = 43/119 (36.13%), Postives = 76/119 (63.87%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            FS +EI  + +RF ++D N  G I  +EFLS+P  A NPL+ RL  +VD      ++F++F+  LSVFS   + ++K++  FK+YD D +G +S  ++  VL+ + G+ + ++Q +Q++
Sbjct:   18 FSNEEIERIRKRFIKIDANQSGSIDRNEFLSIPSVASNPLASRLFSVVDEDGGGDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIV 136          
BLAST of DR406173 vs. ExPASy Swiss-Prot
Match: CANB_YARLI (Calcineurin subunit B OS=Yarrowia lipolytica GN=CNB1 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.077e-16
Identity = 45/119 (37.82%), Postives = 75/119 (63.03%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVL 721
            FS  EI  L +RF +LD +A G +  +EFLS+P  A NPL+ RL+ + D      ++F++F+  LS FS K + ++K++  FKVYD D +G +S  ++  VL+ + G+ + D Q +Q++
Sbjct:   17 FSSDEIDRLRKRFMKLDTDASGILETNEFLSLPGVAANPLASRLMDVFDENHSGDVDFQEFINGLSTFSTKGNKKEKLRFAFKVYDIDRDGYISNGELFIVLKMMVGNNLKDAQLQQIV 135          
The following BLAST results are available for this feature:
BLAST of DR406173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
CANB1_NAEGR3.693e-2542.25Calcineurin subunit B OS=Naegleria gruberi GN=CNB1... [more]
CANB1_DICDI9.414e-2133.10Calcineurin subunit B type 1 OS=Dictyostelium disc... [more]
CANB2_DICDI1.041e-1936.62Calcineurin subunit B type 2 OS=Dictyostelium disc... [more]
CANB_ASHGO4.373e-1833.80Calcineurin subunit B OS=Ashbya gossypii GN=CNB1 P... [more]
CANB_YEAST5.711e-1834.51Calcineurin subunit B OS=Saccharomyces cerevisiae ... [more]
CANB_CANGA5.711e-1833.80Calcineurin subunit B OS=Candida glabrata GN=CNB1 ... [more]
CANB_NEUCR9.742e-1836.97Calcineurin subunit B OS=Neurospora crassa GN=cnb-... [more]
CANB_CRYNE9.742e-1836.97Calcineurin subunit B OS=Cryptococcus neoformans G... [more]
CANB_SCHPO6.314e-1736.13Calcineurin subunit B OS=Schizosaccharomyces pombe... [more]
CANB_YARLI1.077e-1637.82Calcineurin subunit B OS=Yarrowia lipolytica GN=CN... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248P13 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248P13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406173 ID=DR406173; Name=DR406173; organism=Citrus sinensis; type=EST; length=721bp
GGGGACGAGGAATATCCCACGCAATTCTCCGAAAATCAACGGCCGATAAA
ACGACGAAACATAAAAAAGAATGTTACTGCGTGACAGAGAATAATCGGTG
ATGAGGATGAACATCAGATTCCTCGTCATCTAGTACAAACAAAATACTAT
TCTGTGTGTTTTCAATGGCTCGATGATGACGAAGGAGTTTCTGTCATCTA
TATTTCCCGATACTTCATCTTCATCTAAACTCATCTCCTAGCGGTCGGTT
CTTTTTTTCCTACATTTTCTGTTTGTTTCCCGAGAAAACCCAGTTTTGGA
GCGAGAATCAATGGGGACTGCCTCGTCTATGCTAACTCAATATGATATTG
AAGAGGTTCAACAGCACTGCCACAATCTATTTTCTCAACAAGAAATAGTG
TCGTTGTACCAAAGGTTTTGCCAGCTAGATAGAAATGCCAAGGGATTCAT
CTCTGCAGATGAGTTCTTGTCGGTGCCTGAATTTGCAATGAATCCACTTT
CTCAGAGGTTGCTAAAGATGGTGGATGGGTTGAACTTCAAGGATTTTGTG
GCCTTCTTGTCTGTTTTCAGTGCTAAGGCAAGCATGCAGCAGAAAGTTCA
GCTTATTTTCAAAGTGTACGACTCAGACTGTAATGGAAAGGTTTCTTTCA
ATGACATATTGGAAGTGCTGCGGGATTTGTCTGGTTCTTTTATGTCCGAT
GAGCAAAGAGAGCAAGTCTTG
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