DR406118

Overview
NameDR406118
Unique NameDR406118
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length475
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6309 contig Csv1_Contig6309:1..475. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DR406118 vs. ExPASy Swiss-Prot
Match: PPA16_ARATH (Probable inactive purple acid phosphatase 16 OS=Arabidopsis thaliana GN=PAP16 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.644e-14
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 2 
Query:  176 HLRMRAAGGPFKISLFADLHFGENAWTDWGPLQDFNSVKVMSTVLDHETP 325
            +LR+R  G PFKI++FADLHFGE+ WTDWGP QD NSV VMS VLD ETP
Sbjct:   26 NLRVRE-GSPFKIAIFADLHFGEDTWTDWGPGQDVNSVNVMSAVLDAETP 74
The following BLAST results are available for this feature:
BLAST of DR406118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PPA16_ARATH4.644e-1472.00Probable inactive purple acid phosphatase 16 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248M14 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248M14 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406118 ID=DR406118; Name=DR406118; organism=Citrus sinensis; type=EST; length=475bp
GGGGAAACTTAATTATCCTTGAACTTCATGGGACAAAATGGGCAAGTCAT
TGATCCACTTCTCCGTACAATCCGTACTCAATCTGTATGTACATTTGCAA
GCCGTTTTGACCGTCGGATTCGCCTTCGGTCAACCCCAAGAGACCATCGG
GTTACGCACGACGCCGGAAAATGATCATCTTCGCATGCGAGCAGCAGGTG
GGCCCTTCAAGATATCGCTGTTCGCCGACTTGCATTTTGGAGAGAACGCG
TGGACGGATTGGGGCCCACTCCAGGATTTCAACTCTGTTAAAGTCATGTC
GACGGTGCTTGATCATGAAACTCCAGGTGAACATATGGAGGGGCTGAATT
TGATGAATTTCACTAATTTCTAATTGCATGTAGTATATTTTCTGTATTTG
GCCCTATTATGTTTACGGTATTTATGTTATAGCCTTACCAATTTTATAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
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