DR406105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR406105 vs. ExPASy Swiss-Prot
Match: PSD7_ARATH (Probable 26S proteasome non-ATPase regulatory subunit 7 OS=Arabidopsis thaliana GN=RPN8 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 7.291e-45 Identity = 93/116 (80.17%), Postives = 97/116 (83.62%), Query Frame = 2 Query: 5 STLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHXXXXXXXXXXEHEKTEDAKPTAVPTAS 352 STLA EVT KLTALKGLDARLREIR YLDLVI+ KLPLNHEILYHLQDVFNLLPNLNV EL+KAFSVKTNDMMLVIYLSSLIRSVIALH EHEK ED+KP A+P S Sbjct: 193 STLATEVTAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKLLNKEHEKAEDSKPVAIPATS 308
BLAST of DR406105 vs. ExPASy Swiss-Prot
Match: PSD7_BOVIN (26S proteasome non-ATPase regulatory subunit 7 OS=Bos taurus GN=PSMD7 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.913e-25 Identity = 54/104 (51.92%), Postives = 77/104 (74.04%), Query Frame = 2 Query: 8 TLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHXXXXXXXXXXEHEKTE 319 TL+ +T ++ LKGL+++L +IRGYL+ V KLP+NH+I+Y LQDVFNLLP++++ E +KAF +KTND M+V+YL+SLIRSV+ALH + EK E Sbjct: 186 TLSQRITNQVHGLKGLNSKLLDIRGYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKE 289
BLAST of DR406105 vs. ExPASy Swiss-Prot
Match: PSD7_HUMAN (26S proteasome non-ATPase regulatory subunit 7 OS=Homo sapiens GN=PSMD7 PE=1 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 2.439e-24 Identity = 53/104 (50.96%), Postives = 76/104 (73.08%), Query Frame = 2 Query: 8 TLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHXXXXXXXXXXEHEKTE 319 TL+ +T ++ LKGL+++L +IR YL+ V KLP+NH+I+Y LQDVFNLLP++++ E +KAF +KTND M+V+YL+SLIRSV+ALH + EK E Sbjct: 186 TLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKE 289
BLAST of DR406105 vs. ExPASy Swiss-Prot
Match: PSD7_MOUSE (26S proteasome non-ATPase regulatory subunit 7 OS=Mus musculus GN=Psmd7 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 3.185e-24 Identity = 53/104 (50.96%), Postives = 75/104 (72.12%), Query Frame = 2 Query: 8 TLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHXXXXXXXXXXEHEKTE 319 TL+ +T ++ LKGL+++L +IR YL+ V KLP+NH+I+Y LQDVFNLLP+ ++ E +KAF +KTND M+V+YL+SLIRSV+ALH + EK E Sbjct: 186 TLSQRITNQVHGLKGLNSKLLDIRSYLEKVASGKLPINHQIIYQLQDVFNLLPDASLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKE 289
BLAST of DR406105 vs. ExPASy Swiss-Prot
Match: PSD7_DROME (26S proteasome non-ATPase regulatory subunit 7 OS=Drosophila melanogaster GN=Mov34 PE=1 SV=6) HSP 1 Score: 102.064 bits (253), Expect = 1.932e-21 Identity = 46/88 (52.27%), Postives = 68/88 (77.27%), Query Frame = 2 Query: 8 TLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALH 271 +L+ ++T +L LKGL+A+LR+I+ YL V D K+P+NH+I+Y LQD+FNLLP++ + VKTND MLV+YL+S++RS+IALH Sbjct: 189 SLSQKITNQLMGLKGLNAQLRDIKQYLQRVGDSKMPINHQIVYQLQDIFNLLPDITNDQFTGTMYVKTNDQMLVVYLASMVRSIIALH 276
BLAST of DR406105 vs. ExPASy Swiss-Prot
Match: PSD7_DICDI (26S proteasome non-ATPase regulatory subunit 7 OS=Dictyostelium discoideum GN=psmD7 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.523e-21 Identity = 54/118 (45.76%), Postives = 75/118 (63.56%), Query Frame = 2 Query: 5 STLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHXXXXXXXXXXEHEKTEDAKPTAVPTASSS 358 S+L ++T K +LK L L+E++ YL LV D LP NH+I+ ++QD+ NL PNLN E+ K+F+V+ ND M VIYLSS+IRS+IALH E EK D + PT ++S Sbjct: 183 SSLTTQITDKKISLKHLLTNLQEMQHYLKLVCDGTLPPNHQIIGYIQDIINLSPNLNANEISKSFAVQNNDTMSVIYLSSMIRSIIALHNLIINKTANREAEKKADIINSTPPTTATS 300
BLAST of DR406105 vs. ExPASy Swiss-Prot
Match: RPN8_NEUCR (26S proteasome regulatory subunit rpn-8 OS=Neurospora crassa GN=rpn-8 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.759e-20 Identity = 52/120 (43.33%), Postives = 74/120 (61.67%), Query Frame = 2 Query: 8 TLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNV-------------AELIKAFSVKTNDMMLVIYLSSLIRSVIALHXXXXXXXXXXEHEKTEDAK 328 TL+ +T ++ +L+GL RLR+I+ YL V+D +LP+NH IL +LQDVFNLLPNL+ +EL A S+KTND ++ IYLSSLIR++ A H + ++ DAK Sbjct: 194 TLSTRITNQMRSLQGLHHRLRDIQAYLQKVLDGQLPVNHAILGNLQDVFNLLPNLSTPKSGPGATGTNADSELNHAMSIKTNDQLMAIYLSSLIRAITAFHDLIENKIQNRQQQEENDAK 313
BLAST of DR406105 vs. ExPASy Swiss-Prot
Match: RPN8_SCHPO (26S proteasome regulatory subunit rpn8 OS=Schizosaccharomyces pombe GN=rpn8 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.887e-17 Identity = 51/119 (42.86%), Postives = 71/119 (59.66%), Query Frame = 2 Query: 8 TLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELI----------KAFSVKTNDMMLVIYLSSLIRSVIALHXXXXXXXXXXEHEKTEDAKPT 334 TLA VT + +L+GL RL EI YL V+D +LP+NH IL LQ VFNLLPN+ ++ +AF+V +ND ++ IY+SS++R+VIALH E+ +D KPT Sbjct: 193 TLATRVTQQAQSLQGLGQRLTEIADYLRKVVDGQLPINHAILAELQSVFNLLPNIFSGPVVSEQALESEAQRAFNVNSNDQLMSIYISSIVRAVIALHDLLDSLAASKAMEQ-QDIKPT 310
BLAST of DR406105 vs. ExPASy Swiss-Prot
Match: RPN8_YEAST (26S proteasome regulatory subunit RPN8 OS=Saccharomyces cerevisiae GN=RPN8 PE=1 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 6.432e-17 Identity = 47/102 (46.08%), Postives = 68/102 (66.67%), Query Frame = 2 Query: 11 LANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAE-----------------LIKAFSVKTNDMMLVIYLSSLIRSVIA 265 L+ +T +L +LKGL ++L+++ YLD VI+++LP+NH IL LQDVFNLLPNL + L KA +VKTND ++VIY+S+L+RS+IA Sbjct: 186 LSIRLTNQLKSLKGLQSKLKDVVEYLDKVINKELPINHTILGKLQDVFNLLPNLGTPDDDEIDVENHDRINISNNLQKALTVKTNDELMVIYISNLVRSIIA 287
BLAST of DR406105 vs. ExPASy Swiss-Prot
Match: RPN8_CANGA (26S proteasome regulatory subunit RPN8 OS=Candida glabrata GN=RPN8 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.341e-14 Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = 2 Query: 11 LANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAE-----------------LIKAFSVKTNDMMLVIYLSSLIRSVIA 265 L+ +T +L +LKGL +L +I YL+ VI+ +LP+NH IL LQDVFNLLPNL E L +A +VKTND ++VIY+++L+R++IA Sbjct: 186 LSIRLTNQLKSLKGLQKKLNDIVIYLNKVINNELPVNHTILGKLQDVFNLLPNLGYNEETDVSATSNDMVTASNNLQRALTVKTNDELMVIYITNLVRAIIA 287 The following BLAST results are available for this feature:
BLAST of DR406105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >DR406105 ID=DR406105; Name=DR406105; organism=Citrus sinensis; type=EST; length=554bpback to top |