DR406083

Overview
NameDR406083
Unique NameDR406083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6310 contig Csv1_Contig6310:1..775. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR406083 vs. ExPASy Swiss-Prot
Match: ACOT9_MOUSE (Acyl-coenzyme A thioesterase 9, mitochondrial OS=Mus musculus GN=Acot9 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.033e-28
Identity = 86/256 (33.59%), Postives = 136/256 (53.12%), Query Frame = 2
Query:    5 KKPIRVDIDLELTGAVTWVGRSSMEIQLXXXXXXXXXXXXXXXXALVANFTFVARDTKTGKSAPINQILPETEKEKLLWEEAEQRNKMRKTKRAERKMTAENGDKDRLNALLAEGRIFCDMPALADRDSIL------IKDTCHENSLMCQPQQRNIHGRIFGGFLMRKASELAFSTAYTFAGAAPLFVEVDHVDFLKPVDVGNFLRLKSCVLYTELENPARPLINVEVVAHVTSPELRASEISNKFYFTFTIRPEV 754
            K  +  + D++ TG V+WVG +SME+++                 L A F  VARD++    A +N ++PE ++E+ L+++ E  NK R+   +   +       +  N +        D   ++ +  IL      ++DT  ++  +C PQ+RN+  RIFGGFLMRKA ELA++TA +F G+ P  V VD + F KPV+VG+ L L S V +T+ +N     I V V + V+S + R    +N F+FTF    EV
Sbjct:  155 KHSLSPEQDIKFTGHVSWVGNTSMEVKMKMFQLHNDEKYWP---VLDATFVMVARDSENKGPAFVNPLIPENKEEEELFKQGEL-NKSRRIAFSTSSLLKVAPSSEERNIIHELFLTTLDPKTISFQSRILPPKAVWMEDTKLKSLDICHPQERNVFNRIFGGFLMRKAYELAWATACSFGGSRPYVVTVDDIMFQKPVEVGSLLFLSSQVCFTQ-DN----YIQVRVHSEVSSLDSREHMTTNVFHFTFMSEKEV 401          
BLAST of DR406083 vs. ExPASy Swiss-Prot
Match: ACOT9_HUMAN (Acyl-coenzyme A thioesterase 9, mitochondrial OS=Homo sapiens GN=ACOT9 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.614e-27
Identity = 87/259 (33.59%), Postives = 136/259 (52.51%), Query Frame = 2
Query:    5 KKPIRVDIDLELTGAVTWVGRSSMEIQLXXXXXXXXXXXXXXXXALVANFTFVARDTKTGKSAPINQILPETEKEKLLWEEAEQRNKMRK---TKRAERKMTAENGDKDRLNALLAEGRIFCDMPALADRDSILIKDTCH-ENSLM-----CQPQQRNIHGRIFGGFLMRKASELAFSTAYTFAGAAPLFVEVDHVDFLKPVDVGNFLRLKSCVLYTELENPARPLINVEVVAHVTSPELRASEISNKFYFTFTIRPEV 754
            KK +  + D++ +G V+WVG++SME+++                 L A F  VARD++    A +N ++PE+ +E+ L+ + E  NK R+   +  +  KM     ++  ++ +        D   ++ R  +L  +    ENS +     C PQ+RNI  RIFGGFLMRKA ELA++TA +F G+ P  V VD + F KPV+VG+ L L S V +T+        I V V + V S + +    +N F+FTF    EV
Sbjct:  156 KKSLSPEQDIKFSGHVSWVGKTSMEVKMQMFQLHGDEFCP----VLDATFVMVARDSENKGPAFVNPLIPESPEEEELFRQGEL-NKGRRIAFSSTSLLKMAPSAEERTTIHEMFLST---LDPKTISFRSRVLPSNAVWMENSKLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSFGGSRPFVVAVDDIMFQKPVEVGSLLFLSSQVCFTQ-----NNYIQVRVHSEVASLQEKQHTTTNVFHFTFMSEKEV 401          
BLAST of DR406083 vs. ExPASy Swiss-Prot
Match: ACO10_MOUSE (Acyl-coenzyme A thioesterase 10, mitochondrial OS=Mus musculus GN=Acot10 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.824e-27
Identity = 83/256 (32.42%), Postives = 133/256 (51.95%), Query Frame = 2
Query:    5 KKPIRVDIDLELTGAVTWVGRSSMEIQLXXXXXXXXXXXXXXXXALVANFTFVARDTKTGKSAPINQILPETEKEKLLWEEAEQRNKMRKTKRAERKMTAENGDKDRLNALLAEGRIFCDMPALADRDSIL------IKDTCHENSLMCQPQQRNIHGRIFGGFLMRKASELAFSTAYTFAGAAPLFVEVDHVDFLKPVDVGNFLRLKSCVLYTELENPARPLINVEVVAHVTSPELRASEISNKFYFTFTIRPEV 754
            K  +  + D++ TG V+WVG ++ME+++                 L A F  VA+D++  + A +N ++PE ++E+ L+ + E  NK R+   +   +       +  N +        D   ++ +  IL      ++DT  ++  +C PQ+RN+  RIFGGFLMRKA ELA++TA +F G+ P  V VD + F KPV+VG+ L L S V +T+        I V V + V S + R    +N F+FTF    EV
Sbjct:  155 KHSLSPEQDIKFTGHVSWVGNTTMEVKMKMFQLHDDETYWP---VLDATFVMVAQDSENKRPAFVNPLIPENKEEEELFTQGEL-NKSRRIAFSTSSLLKVAPSSEERNIIHELFLSTLDPKTISFQSRILPPKAVWMEDTKLKSLDICHPQERNVFNRIFGGFLMRKAYELAWATACSFGGSRPYVVTVDDIMFQKPVEVGSLLFLSSQVCFTQ-----GNYIQVRVHSEVFSLDSREHMTTNVFHFTFMSEKEV 401          
BLAST of DR406083 vs. ExPASy Swiss-Prot
Match: ACOT9_BOVIN (Acyl-coenzyme A thioesterase 9, mitochondrial OS=Bos taurus GN=ACOT9 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.451e-25
Identity = 82/257 (31.91%), Postives = 133/257 (51.75%), Query Frame = 2
Query:    5 KKPIRVDIDLELTGAVTWVGRSSMEIQLXXXXXXXXXXXXXXXXALVANFTFVARDTKTGKSAPINQILPETEKEKLLWEEAE----QRNKMRKTKRAERKMTAENGDKDR---LNALLAEGRIFCDMPALADRDSILIKDTCHENSLMCQPQQRNIHGRIFGGFLMRKASELAFSTAYTFAGAAPLFVEVDHVDFLKPVDVGNFLRLKSCVLYTELENPARPLINVEVVAHVTSPELRASEISNKFYFTFTIRPEV 754
            KK +  + D++ +G V+WVG++SME+++                 L A F  VARD++    A +N ++ E+ +E+ L+++ E    +R     T   +   TAE         LN L  + +       +   +S+ ++++  ++  +C PQ+RNI  RIFGGFLMRKA EL ++TA  F G+ P  V VD + F KPV+VG+ L L + V +T+        I V V + V S + +    +N F+FTF    EV
Sbjct:  154 KKNLSPEQDIKFSGHVSWVGKTSMEVKMHMFQLHGNDFSP----VLDATFVMVARDSENKGPAFVNPLILESPEEEELFQQGELNKGRRVAFSSTSLLKMAPTAEERTTIHEMFLNTL--DPKTISFRSRVLPANSVWMENSKLKSLDICHPQERNIFNRIFGGFLMRKAYELGWATACNFGGSRPFIVAVDDIMFQKPVEVGSLLFLSAQVCFTQ-----GNYIQVRVHSEVASLQDKEHMTTNVFHFTFMSEKEV 399          
The following BLAST results are available for this feature:
BLAST of DR406083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ACOT9_MOUSE4.033e-2833.59Acyl-coenzyme A thioesterase 9, mitochondrial OS=M... [more]
ACOT9_HUMAN2.614e-2733.59Acyl-coenzyme A thioesterase 9, mitochondrial OS=H... [more]
ACO10_MOUSE5.824e-2732.42Acyl-coenzyme A thioesterase 10, mitochondrial OS=... [more]
ACOT9_BOVIN5.451e-2531.91Acyl-coenzyme A thioesterase 9, mitochondrial OS=B... [more]
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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248K16 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248K16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406083 ID=DR406083; Name=DR406083; organism=Citrus sinensis; type=EST; length=775bp
GGGGAAGAAACCAATCCGTGTTGACATCGATTTGGAATTAACTGGAGCTG
TTACATGGGTTGGGCGGTCTTCCATGGAGATTCAACTTGAAGTGACTCAA
TCCACACAAGATACTACAGATTCAACGGAATCAGTAGCCCTTGTGGCAAA
CTTCACATTTGTAGCTCGTGACACCAAGACAGGAAAATCAGCTCCAATTA
ACCAGATCTTGCCTGAAACGGAGAAAGAAAAATTGCTTTGGGAAGAAGCT
GAGCAAAGGAACAAAATGCGGAAAACAAAGAGAGCAGAAAGGAAAATGAC
TGCTGAAAATGGAGATAAAGACAGGCTTAATGCATTGTTGGCTGAAGGGC
GAATCTTCTGTGACATGCCAGCACTGGCAGACAGAGATAGCATTCTTATT
AAGGATACATGCCATGAGAACTCCTTGATGTGTCAGCCACAGCAAAGGAA
CATTCATGGTCGGATTTTTGGCGGATTTTTGATGCGTAAAGCATCTGAAC
TGGCCTTCTCAACTGCTTACACATTTGCTGGTGCAGCACCTCTCTTTGTT
GAAGTAGATCATGTTGATTTTTTAAAACCTGTGGATGTCGGAAACTTCCT
CCGTCTCAAGTCATGTGTTTTGTATACGGAACTTGAGAACCCAGCCAGAC
CTCTGATAAATGTAGAAGTTGTAGCTCATGTTACAAGTCCTGAACTAAGG
GCCAGTGAGATATCGAATAAATTCTACTTCACCTTTACTATCCGTCCTGA
GGTAAAGAAAGATGGATTGAGCATT
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