DR406020

Overview
NameDR406020
Unique NameDR406020
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5704 contig Csv1_Contig5704:54..784. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.490e-71
Identity = 125/212 (58.96%), Postives = 156/212 (73.58%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEP-SDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            E P S+DWRK+G V  VKDQG CGSCW+FST GA+EGIN +VTGDLI+LSEQELVDCDT+ + GC+GG MDYAFE++I NGGIDT+ DYPY GVDGTC+  ++  KVV+ID Y+DV   S+ +L  A   QPIS+ +      FQLY SGI++G C      +DH V+ VGYG+ENG+DYWIV+NSWG SWG  GY  + R+ +   GKC I
Sbjct:  136 ELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIFDGSCGTQ---LDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASSSGKCGI 344          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 258.84 bits (660), Expect = 2.117e-68
Identity = 120/210 (57.14%), Postives = 151/210 (71.90%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEP-SDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            P S+DWR +G V  +KDQG CGSCW+FS   A+EGIN +VTGDLISLSEQELVDCDT+ + GC+GG MDYAF+++INNGGIDTE DYPY G D  C++ ++  KVV+ID Y+DV P S+++L  A   QP+SV +      FQLY+SGI+ G C      +DH V  VGYG+ENG+DYWIV+NSWG SWG  GY  + R+     GKC I
Sbjct:  130 PESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLYSSGIFTGKCGT---ALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGKCGI 336          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 5.215e-67
Identity = 117/212 (55.19%), Postives = 154/212 (72.64%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            E P ++DWR++G V  +KDQG+CGSCW+FST  A+EGIN +VTG+L+SLSEQELVDCD + + GC+GG MDYAF++++ NGG++TE DYPY G +G CN   + ++VV+IDGY+DV   D   L  AV  QP+SV +      FQ Y SGI+ G C  +   +DHAV+ VGYGSENG DYWIV+NSWGT WG DGY  + R+ + + GKC I
Sbjct:   99 EVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGKCGTN---MDHAVVAVGYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVASKSGKCGI 307          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 1.517e-66
Identity = 119/217 (54.84%), Postives = 155/217 (71.43%), Query Frame = 1
Query:    4 VQSCEAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRD-TSLEYGKCAI 645
            V   E P ++DWR++G V P+KDQG+CGSCW+FSTT A+EGIN +VTG+LISLSEQELVDCD + + GC+GG MDYAF++++ NGG++TE DYPY G  G CN   + ++VVSIDGY+DV   D   L  A+  QP+SV +      FQ Y SGI+ G C  +   +DHAV+ VGYGSENG DYWIV+NSWG  WG +GY  + R+  + + GKC I
Sbjct:  140 VNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTGSCGTN---LDHAVVAVGYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGI 353          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 251.906 bits (642), Expect = 2.588e-66
Identity = 117/217 (53.92%), Postives = 153/217 (70.51%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT--SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAV-QQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            E P S+DWR++G V PVK+QG CGSCW+FS    +E IN LVTG++I+LSEQELV+C T   + GC+GG MD AF+++I NGGIDTE DYPY  VDG C+I +E  KVVSIDG++DV  +D   L  AV  QP+SV +     +FQLY SG+++G C      +DH V+ VGYG++NG+DYWIV+NSWG  WG  GY  + R+ ++  GKC I  MA
Sbjct:  140 ELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGRCGTS---LDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMMA 353          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 246.128 bits (627), Expect = 1.420e-64
Identity = 115/214 (53.74%), Postives = 152/214 (71.03%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSD-SALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            P S+DWRK+G V  VK+QGSCGSCW+FST  A+EGIN +VTG+L +LSEQEL+DCDTT + GC+GG MDYAFE+++ NGG+  E DYPY+  +GTC + K+E++ V+I+G++DV  +D  +LL A   QP+SV +  S  +FQ Y+ G+++G C  D   +DH V  VGYGS  G DY IVKNSWG  WG  GY  + R+T    G C IN MA
Sbjct:  139 PKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVAIDASGREFQFYSGGVFDGRCGVD---LDHGVAAVGYGSSKGSDYIIVKNSWGPKWGEKGYIRLKRNTGKPEGLCGINKMA 349          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.423e-64
Identity = 116/216 (53.70%), Postives = 146/216 (67.59%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDV-EPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            + P S+DWRK+G V PVKDQG CGSCW+FST  A+EGIN + TG+L SLSEQEL+DCDTT + GC+GG MDYAF+++I+ GG+  E DYPY   +G C   KE+ + V+I GY+DV E  D +L+ A   QP+SV +  S  DFQ Y  G++NG C  D   +DH V  VGYGS  G DY IVKNSWG  WG  G+  + R+T    G C IN MA
Sbjct:  136 DLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNGKCGTD---LDHGVAAVGYGSSKGSDYVIVKNSWGPRWGEKGFIRMKRNTGKPEGLCGINKMA 348          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.569e-63
Identity = 114/215 (53.02%), Postives = 149/215 (69.30%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDV-EPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMA 657
            + P S+DWR+ G V PVK+QG CGSCW+FST  A+EGIN +VTGDLISLSEQ+LVDC T ++GC GG+M+ AF++++NNGGI++E  YPY G DG CN T     VVSID Y++V   ++ +L  A   QP+SV M  +  DFQLY SGI+ G C+      +HA+ +VGYG+EN +D+WIVKNSWG +WG  GY    R+     GKC I   A
Sbjct:    2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQDGICNST-VNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCN---ISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFA 212          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 5.967e-63
Identity = 117/216 (54.17%), Postives = 147/216 (68.06%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDT--TSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD-GTCNITK-EETKVVSIDGYKDVEPSDSALLCAAV-QQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAM 654
            P  +DWR  G V  VKDQG+CGSCW+FS  GA+EGIN + TG+LISLSEQELVDCD    + GCDGG M+YAFE+++ NGGI+T+ DYPY   D G CN  K   T+VV+IDGY+DV   D   L  AV  QP+SV +  S+  FQLY SG+  G C      +DH V++VGYGS +GEDYWI++NSWG +WG  GY  + R+    +GKC I  M
Sbjct:  131 PDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVMTGTCG---ISLDHGVVVVGYGSTSGEDYWIIRNSWGLNWGDSGYVKLQRNIDDPFGKCGIAMM 343          
BLAST of DR406020 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.329e-62
Identity = 114/210 (54.29%), Postives = 146/210 (69.52%), Query Frame = 1
Query:   22 PSSLDWRKRGIVTPVKDQGSCGSCWSFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAI 645
            P S+DWR++G++  VKDQGSCGSCW+FS   A+E INA+VTG+LISLSEQELVDCD + + GCDGG MDYAFE+VI NGGIDTE DYPY   +G C+  ++  KVV ID Y+DV   ++ AL  A   QP+S+ +     DFQ Y SGI+ G C      +DH V+I GYG+ENG DYWIV+NSWG +   +GY  + R+ S   G C +
Sbjct:   19 PESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGT---AVDHGVVIAGYGTENGMDYWIVRNSWGANCRENGYLRVQRNVSSSSGLCGL 225          
The following BLAST results are available for this feature:
BLAST of DR406020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
RD21A_ARATH3.490e-7158.96Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
ORYA_ORYSJ2.117e-6857.14Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CYSP4_BRANA5.215e-6755.19Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
GCP1_ARATH1.517e-6654.84Germination-specific cysteine protease 1 OS=Arabid... [more]
ORYB_ORYSJ2.588e-6653.92Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
XCP2_ARATH1.420e-6453.74Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
XCP1_ARATH2.423e-6453.70Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CPGP2_ZINOF4.569e-6353.02Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CPR1_ARATH5.967e-6354.17Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CYSPL_SOLLC1.329e-6254.29Low-temperature-induced cysteine proteinase (Fragm... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248H16 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248H16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406020 ID=DR406020; Name=DR406020; organism=Citrus sinensis; type=EST; length=731bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGTCGT
TCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGAC
CTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCTA
TGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAACA
ACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGGT
ACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTTA
TAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAAC
AACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATAT
ACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTGA
TCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTATT
GGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTTT
TACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATGC
TATGGCTTCTTATCCAATCGAAGAATCCTATGCACCATCTCCCTATTCAC
CACCATCCGAGCCACCCCCGCTACCGTCACC
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