DR406016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR406016 vs. ExPASy Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.193e-43 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 3 Query: 153 MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIMEKNDLRPAVREDSGASSAWAPDPITGYYRPE 374 MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIMEKNDLRPAVREDSGASSAWAPDPITGYYRPE Sbjct: 1 MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIMEKNDLRPAVREDSGASSAWAPDPITGYYRPE 74 HSP 2 Score: 47.7506 bits (112), Expect = 6.193e-43 Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2 Query: 374 DRAVEIDPAELREMLLNHKVRAH 442 +RAVEIDPAELREMLLNHKVRAH Sbjct: 75 NRAVEIDPAELREMLLNHKVRAH 97
BLAST of DR406016 vs. ExPASy Swiss-Prot
Match: LEA5D_GOSHI (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.983e-17 Identity = 42/82 (51.22%), Postives = 53/82 (64.63%), Query Frame = 3 Query: 153 MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLG---TISRTGIMEKNDLRPAVREDSGA-----SSAWAPDPITGYYRPE 374 MARS+ KLL A + DG+ +SISRRGY+ A P + R G M K + R A++E S + SSAWAPDP+TGYYRPE Sbjct: 1 MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSSSETRAYSSAWAPDPVTGYYRPE 82 HSP 2 Score: 33.8834 bits (76), Expect = 2.983e-17 Identity = 15/18 (83.33%), Postives = 17/18 (94.44%), Query Frame = 2 Query: 386 EIDPAELREMLLNHKVRA 439 EID AELREMLLNH+VR+ Sbjct: 87 EIDAAELREMLLNHRVRS 104
BLAST of DR406016 vs. ExPASy Swiss-Prot
Match: LEA5A_GOSHI (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.992e-15 Identity = 41/82 (50.00%), Postives = 51/82 (62.20%), Query Frame = 3 Query: 153 MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLG---TISRTGIMEKNDLRPAVREDSGA-----SSAWAPDPITGYYRPE 374 MARS+ K L A V D + +SISRRGY+ A P + R G M K + R A++E S + SSAWAPDP+TGYYRPE Sbjct: 1 MARSVSSFKFLGASVFDALYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSSSETRAYSSAWAPDPVTGYYRPE 82 HSP 2 Score: 31.9574 bits (71), Expect = 1.992e-15 Identity = 13/18 (72.22%), Postives = 17/18 (94.44%), Query Frame = 2 Query: 386 EIDPAELREMLLNHKVRA 439 EID A+LREM+LNH+VR+ Sbjct: 87 EIDAADLREMMLNHRVRS 104 The following BLAST results are available for this feature:
BLAST of DR406016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR406016 ID=DR406016; Name=DR406016; organism=Citrus sinensis; type=EST; length=691bpback to top |