DR405930

Overview
NameDR405930
Unique NameDR405930
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6302 contig Csv1_Contig6302:1..780. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405930 vs. ExPASy Swiss-Prot
Match: CANB1_NAEGR (Calcineurin subunit B OS=Naegleria gruberi GN=CNB1 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.106e-25
Identity = 62/158 (39.24%), Postives = 103/158 (65.19%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLT 769
            MGT +S L   ++EE+Q+  +  F+Q+EI  LY+RF +LD++  G IS DEFL +PE A+NPL +R++ + D      +NFK+F+A LSVF+A+   Q+K++  FKVYD D +G +S  ++  VL+ + G+ +SD Q +Q++ +   +A    D  ++
Sbjct:    1 MGTNTSSLRPEEVEEMQKGTN--FTQKEIKKLYKRFKKLDKDGNGTISKDEFLMIPELAVNPLVKRVISIFDENGDGSVNFKEFIAALSVFNAQGDKQRKLEFAFKVYDIDGDGYISNGELFTVLKMMVGNNLSDVQLQQIVDKTILEADEDGDGKIS 156          
BLAST of DR405930 vs. ExPASy Swiss-Prot
Match: CANB1_DICDI (Calcineurin subunit B type 1 OS=Dictyostelium discoideum GN=cnbA PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.550e-22
Identity = 49/161 (30.43%), Postives = 101/161 (62.73%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLTLGD 778
            MG   S+L +  +E+++ +  + FS+ E+  LY+RF  LD++  G ++ DEFLS+P+ A+NPL +R++++ D      + F +FV  L+  S K + + K++ +F++YD DC+G +S  ++ +VL+ + G+ ++D Q +Q++ +   +  Y +D  ++  +
Sbjct:    1 MGNQHSLLNKEQLEQMKDN--SSFSEAELKKLYRRFQMLDKDGSGTLTTDEFLSIPDLALNPLLERVIQIFDQNKDNEIEFFEFVGTLATLSHKGTKEDKLKFLFQIYDIDCDGFISNGELFQVLKMMVGTNLNDVQLQQIVDKTIIEGDYDKDGKISFDE 159          
BLAST of DR405930 vs. ExPASy Swiss-Prot
Match: CANB2_DICDI (Calcineurin subunit B type 2 OS=Dictyostelium discoideum GN=cnbB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.827e-20
Identity = 53/149 (35.57%), Postives = 92/149 (61.74%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDA 742
            MG + S L   +IEE+++   ++FSQ+EI  LY+RF +LD+  KG I+ ++F  +PE +MNP+  R++ + D      +NFK FV  LS F  KA    K++++FKVYD + +G ++ ++I  +L  + GS ++ EQ   ++ +   +A
Sbjct:    1 MGVSRSTLRTEEIEEIREV--SIFSQREIKRLYKRFKRLDKEEKGSINVEDFNQIPELSMNPMLPRIISIFDVNRDGQVNFKQFVKSLSTFHPKADKADKIKILFKVYDINNDGFITRDEIETILTMMVGSNLTKEQISSIVEETLNEA 147          
BLAST of DR405930 vs. ExPASy Swiss-Prot
Match: CANB_NEUCR (Calcineurin subunit B OS=Neurospora crassa GN=cnb-1 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.879e-19
Identity = 46/135 (34.07%), Postives = 87/135 (64.44%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLT 769
            F ++E+  L +RF +LD++  G I  +EFLS+P+ + NPL+ R++ + D      ++F++FV+ LS FS+K + +QK++  FKVYD D +G +S  ++  VL+ + GS + D+Q +Q++ +   +A   +D  ++
Sbjct:   18 FDREEVDRLRKRFMKLDKDNSGTIEREEFLSLPQISTNPLATRMIAIFDEDGGGDVDFQEFVSGLSAFSSKGNKEQKLRFAFKVYDIDRDGYISNGELFIVLKMMVGSNLKDQQLQQIVDKTIMEADLDKDGKIS 152          
BLAST of DR405930 vs. ExPASy Swiss-Prot
Match: CANB_CRYNE (Calcineurin subunit B OS=Cryptococcus neoformans GN=CNB1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.310e-18
Identity = 47/135 (34.81%), Postives = 82/135 (60.74%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDG-----LNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLT 769
            FS  E++ L +RF +LD++  G I  DEFL +P+ A NPL+ R++ + D      ++F++FV  LS FS+K    +K++  FKVYD D +G +S  ++  VL+ + G+ + D+Q +Q++ +   +A    D  L+
Sbjct:   18 FSGPELMRLKKRFMKLDKDGSGSIDKDEFLQIPQIANNPLAHRMIAIFDEDGSGTVDFQEFVGGLSAFSSKGGRDEKLRFAFKVYDMDRDGYISNGELYLVLKQMVGNNLKDQQLQQIVDKTIMEADKDGDGKLS 152          
BLAST of DR405930 vs. ExPASy Swiss-Prot
Match: CANB_CANGA (Calcineurin subunit B OS=Candida glabrata GN=CNB1 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.234e-18
Identity = 50/158 (31.65%), Postives = 91/158 (57.59%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLN-----FKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLT 769
            MG A S + +  +E+        F + EI  L +RF +LDR++ G I  +EF+S+P  + NPL+ R++++ D  N     F++F+  LS+FS + S  +K++  FK+YD D +G +S  ++  VL+ + GS + D+Q +Q++ +   +     D  L+
Sbjct:    1 MGAAPSKIVETLLEDTN------FDRDEIERLRKRFMKLDRDSSGSIDKNEFMSIPGVSANPLAGRIMEVFDADNSGDVDFQEFITGLSIFSGRGSKDEKLKFAFKIYDIDKDGLISNGELFIVLKIMVGSNLDDKQLQQIVDRTIMENDLDGDGQLS 152          
BLAST of DR405930 vs. ExPASy Swiss-Prot
Match: CANB_ASHGO (Calcineurin subunit B OS=Ashbya gossypii GN=CNB1 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.234e-18
Identity = 50/158 (31.65%), Postives = 95/158 (60.13%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLN-----FKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLT 769
            MG+A S + +  +++        F ++EI  L +RF +LDR++ G I  +EF+S+P  + NPL+ R++++ D  N     F++F++ LSVFS ++  ++K++  FK+YD D +G +S  ++  VL+ + G+ + DEQ +QV+ +   +     D  L+
Sbjct:    1 MGSAPSKILEDLLDDTN------FDREEIERLRKRFMKLDRDSSGSIDKNEFMSIPGVSSNPLAGRIMEVFDADNSGDVDFQEFISGLSVFSGRSDKEEKLRFAFKIYDIDKDGYISNGELFIVLKIMVGNNLEDEQLQQVVDRTIMENDVDGDGKLS 152          
BLAST of DR405930 vs. ExPASy Swiss-Prot
Match: CANB_YEAST (Calcineurin subunit B OS=Saccharomyces cerevisiae GN=CNB1 PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 4.977e-18
Identity = 51/158 (32.28%), Postives = 90/158 (56.96%), Query Frame = 2
Query:  311 MGTASSMLTQYDIEEVQQHCHNLFSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVDGLN-----FKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLT 769
            MG A S +    +E+        F + EI  L +RF +LDR++ G I  +EF+S+P  + NPL+ R++++ D  N     F++F+  LS+FS + S  +K++  FK+YD D +G +S  ++  VL+ + GS + DEQ +Q++ +   +     D  L+
Sbjct:    1 MGAAPSKIVDGLLEDTN------FDRDEIERLRKRFMKLDRDSSGSIDKNEFMSIPGVSSNPLAGRIMEVFDADNSGDVDFQEFITGLSIFSGRGSKDEKLRFAFKIYDIDKDGFISNGELFIVLKIMVGSNLDDEQLQQIVDRTIVENDSDGDGRLS 152          
BLAST of DR405930 vs. ExPASy Swiss-Prot
Match: CANB_SCHPO (Calcineurin subunit B OS=Schizosaccharomyces pombe GN=cnb1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.500e-18
Identity = 45/135 (33.33%), Postives = 82/135 (60.74%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLT 769
            FS +EI  + +RF ++D N  G I  +EFLS+P  A NPL+ RL  +VD      ++F++F+  LSVFS   + ++K++  FK+YD D +G +S  ++  VL+ + G+ + ++Q +Q++ +   +    RD  ++
Sbjct:   18 FSNEEIERIRKRFIKIDANQSGSIDRNEFLSIPSVASNPLASRLFSVVDEDGGGDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKIS 152          
BLAST of DR405930 vs. ExPASy Swiss-Prot
Match: CANB_YARLI (Calcineurin subunit B OS=Yarrowia lipolytica GN=CNB1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.470e-17
Identity = 47/135 (34.81%), Postives = 81/135 (60.00%), Query Frame = 2
Query:  380 FSQQEIVSLYQRFCQLDRNAKGFISADEFLSVPEFAMNPLSQRLLKMVD-----GLNFKDFVAFLSVFSAKASMQQKVQLIFKVYDSDCNGKVSFNDILEVLRDLSGSFMSDEQREQVLTQVFKDAGYTRDSYLT 769
            FS  EI  L +RF +LD +A G +  +EFLS+P  A NPL+ RL+ + D      ++F++F+  LS FS K + ++K++  FKVYD D +G +S  ++  VL+ + G+ + D Q +Q++ +   +A    D  ++
Sbjct:   17 FSSDEIDRLRKRFMKLDTDASGILETNEFLSLPGVAANPLASRLMDVFDENHSGDVDFQEFINGLSTFSTKGNKKEKLRFAFKVYDIDRDGYISNGELFIVLKMMVGNNLKDAQLQQIVDKTIMEADKDGDGKIS 151          
The following BLAST results are available for this feature:
BLAST of DR405930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CANB1_NAEGR1.106e-2539.24Calcineurin subunit B OS=Naegleria gruberi GN=CNB1... [more]
CANB1_DICDI2.550e-2230.43Calcineurin subunit B type 1 OS=Dictyostelium disc... [more]
CANB2_DICDI1.827e-2035.57Calcineurin subunit B type 2 OS=Dictyostelium disc... [more]
CANB_NEUCR5.879e-1934.07Calcineurin subunit B OS=Neurospora crassa GN=cnb-... [more]
CANB_CRYNE1.310e-1834.81Calcineurin subunit B OS=Cryptococcus neoformans G... [more]
CANB_CANGA2.234e-1831.65Calcineurin subunit B OS=Candida glabrata GN=CNB1 ... [more]
CANB_ASHGO2.234e-1831.65Calcineurin subunit B OS=Ashbya gossypii GN=CNB1 P... [more]
CANB_YEAST4.977e-1832.28Calcineurin subunit B OS=Saccharomyces cerevisiae ... [more]
CANB_SCHPO6.500e-1833.33Calcineurin subunit B OS=Schizosaccharomyces pombe... [more]
CANB_YARLI2.470e-1734.81Calcineurin subunit B OS=Yarrowia lipolytica GN=CN... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248D13 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248D13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405930 ID=DR405930; Name=DR405930; organism=Citrus sinensis; type=EST; length=780bp
GGGGACGAGGAATATCCCACGCAATTCTCCGAAAATCAACGGCCGATAAA
ACGACGAAACATAAAAAAGAATGTTACTGCGTGACAGAGAATAATCGGTG
ATGAGGATGAACATCAGATTCCTCGTCATCTAGTACAAACAAAATACTAT
TCTGTGTGTTTTCAATGGCTCGATGATGACGAAGGAGTTTCTGTCATCTA
TATTTCCCGATACTTCATCTTCATCTAAACTCATCTCCTAGCGGTCGGTT
CTTTTTTTCCTACATTTTCTGTTTGTTTCCCGAGAAAACCCAGTTTTGGA
GCGAGAATCAATGGGGACTGCCTCGTCTATGCTAACTCAATATGATATTG
AAGAGGTTCAACAGCACTGCCACAATCTATTTTCTCAACAAGAAATAGTG
TCGTTGTACCAAAGGTTTTGCCAGCTAGATAGAAATGCCAAGGGATTCAT
CTCTGCAGATGAGTTCTTGTCGGTGCCTGAATTTGCAATGAATCCACTTT
CTCAGAGGTTGCTAAAGATGGTGGATGGGTTGAACTTCAAGGATTTTGTG
GCCTTCTTGTCTGTTTTCAGTGCTAAGGCAAGCATGCAGCAGAAAGTTCA
GCTTATTTTCAAAGTGTACGACTCAGACTGTAATGGAAAGGTTTCTTTCA
ATGACATATTGGAAGTGCTGCGGGATTTGTCTGGTTCTTTTATGTCCGAT
GAGCAAAGAGAGCAAGTCTTGACCCAAGTATTCAAGGATGCAGGTTACAC
AAGGGATTCTTATTTAACGTTGGGGGACTT
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