DR405897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR405897 vs. ExPASy Swiss-Prot
Match: RPG1_ARATH (Protein RUPTURED POLLEN GRAIN 1 OS=Arabidopsis thaliana GN=RPG1 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.184e-28 Identity = 66/187 (35.29%), Postives = 111/187 (59.36%), Query Frame = 3 Query: 180 MFDHHQWGVAFGILGNIISFLVYLAPVPTFYRIYRKKSTESFQSLPYLVALFSSMMWFYYAL--VKQNAFLLVTINCFGCVIETIYIILFITY-APKGSRNSTVKLFVSMNVGVFSLILLLTHFLATGS-TRILILGWICVAFSVSVFAAPLSIVAQVIRTKSVEFMPFNLSFFLTLSAIMWFAYGL 728 M D Q G++GN+ISF ++ AP TF+RI++KKS E F +PY+ + + M+W +Y L V +++ L+ TIN G VIE Y+ +++ Y K + + F+++ V + I+L+T F G + +G IC F+++++ AP + +V++TKSVE+MPF LS ++A +W Y L Sbjct: 1 MVDAKQVRFIIGVIGNVISFGLFAAPAKTFWRIFKKKSVEEFSYVPYVATVMNCMLWVFYGLPVVHKDSILVSTINGVGLVIELFYVGVYLMYCGHKKNHRRNILGFLALEVILVVAIILITLFALKGDFVKQTFVGVICDVFNIAMYGAPSLAIIKVVKTKSVEYMPFLLSLVCFVNAGIWTTYSL 187
BLAST of DR405897 vs. ExPASy Swiss-Prot
Match: R1AP1_XENLA (RAG1-activating protein 1 homolog OS=Xenopus laevis GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.282e-14 Identity = 45/153 (29.41%), Postives = 88/153 (57.52%), Query Frame = 3 Query: 285 KKSTESFQSLPYLVALFSSMMWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLL-----THFLATGSTRILILGWICVAFSVSVFAAPLSIVAQVIRTKSVEFMPFNLSFFLTLSAIMWFAYGL 728 ++S E+ Q LP+L +++ WFYY +K + L++ +N G ++++Y+ ++ Y+P+ + +V V V +LLL T ++ ++R+ LG C F++S++ +PL+ +AQ+IR+KS + + F L+ L++ W YGL Sbjct: 32 QRSVENIQYLPFLTTDLNNLGWFYYGYLKGDGTLMI-VNVIGASLQSLYMGAYLLYSPE-------RRYVGSQVLVSLGVLLLGYCYFTLWILDLNSRLNQLGLFCSVFTISMYLSPLADLAQIIRSKSTKCLSFPLTVATFLTSSSWVLYGL 176
BLAST of DR405897 vs. ExPASy Swiss-Prot
Match: R1AP1_XENTR (RAG1-activating protein 1 homolog OS=Xenopus tropicalis GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.980e-14 Identity = 44/147 (29.93%), Postives = 85/147 (57.82%), Query Frame = 3 Query: 285 KKSTESFQSLPYLVALFSSMMWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLLTHFLATGSTRILILGWICVAFSVSVFAAPLSIVAQVIRTKSVEFMPFNLSFFLTLSAIMWFAYG 725 K+S E+ Q LP+L +++ WFYY +K + L++ +N G ++T+Y+ +I Y+ + R ++ VS+ V +F T + ++R+ LG C F++S++ +PL+ +AQ+I++KS + + F L+ L++ W YG Sbjct: 32 KRSVENIQFLPFLTTDLNNLGWFYYGYLKGDGTLII-VNLIGASLQTLYMAAYILYSLE-RRYVVSQVLVSLGV-LFLAHCYFTLWTPDINSRLNQLGLFCSIFTISMYLSPLADLAQIIKSKSTKCLSFPLTVATFLTSTSWVLYG 175
BLAST of DR405897 vs. ExPASy Swiss-Prot
Match: R1AP1_MOUSE (RAG1-activating protein 1 OS=Mus musculus GN=Rag1ap1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13 Identity = 42/150 (28.00%), Postives = 83/150 (55.33%), Query Frame = 3 Query: 282 RKKSTESFQSLPYLVALFSSMMWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPK--GSRNSTVKLFVSMNVGVFSLILLLTHFLATGSTRILILGWICVAFSVSVFAAPLSIVAQVIRTKSVEFMPFNLSFFLTLSAIMWFAYG 725 R +S ++ Q LP+L +++ W Y ++K + L++ +N G V++T+YI+ ++ Y+P+ G T L + +G LL+ A R+ LG C F++S++ +PL+ +A++++TKS + + F+L+ + W YG Sbjct: 35 RTRSVDNIQFLPFLTTDVNNLSWLSYGVLKGDGTLII-VNSVGAVLQTLYILAYLHYSPQKHGVLLQTATLLAVLLLGYGYFWLLVPDLEA----RLQQLGLFCSVFTISMYLSPLADLAKIVQTKSTQRLSFSLTIATLFCSASWSIYG 179
BLAST of DR405897 vs. ExPASy Swiss-Prot
Match: R1AP1_PAPAN (RAG1-activating protein 1 OS=Papio anubis GN=RAG1AP1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13 Identity = 44/149 (29.53%), Postives = 83/149 (55.70%), Query Frame = 3 Query: 288 KSTESFQSLPYLVALFSSMMWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLLTHF---LATGSTRILILGWICVAFSVSVFAAPLSIVAQVIRTKSVEFMPFNLSFFLTLSAIMWFAYG 725 +S ++ Q LP+L +++ W Y +K + L+V +N G ++T+YI+ ++ Y P R V L + +GV L+L +F + R+ +LG C F++S++ +PL+ +A+VI+TKS + + + L+ L++ W YG Sbjct: 37 RSVDNVQFLPFLTTEVNNLGWLSYGALKGDRILIV-VNTVGAALQTLYILAYLHYCP---RKRVVLLQTATLLGV--LLLGYGYFWLLVPNPEARLQLLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATVLTSASWCLYG 179
BLAST of DR405897 vs. ExPASy Swiss-Prot
Match: R1AP1_DANRE (RAG1-activating protein 1 homolog OS=Danio rerio GN=rag1ap1 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13 Identity = 43/151 (28.48%), Postives = 81/151 (53.64%), Query Frame = 3 Query: 288 KSTESFQSLPYLVALFSSMMWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGV----FSLILLLTHFLATGSTRILILGWICVAFSVSVFAAPLSIVAQVIRTKSVEFMPFNLSFFLTLSAIMWFAYGL 728 +S ++ Q LP+L +++ W YY L+K + ++ +N G ++T+YI + Y + R T L + + V FSL++ + G ++ LG C F++S++ +PL+ + ++RTKSVE + F+L+ ++ W YGL Sbjct: 33 QSADNVQFLPFLTTCLNNLGWLYYGLLKGDG-TVIFVNIIGAFLQTVYIATYCHYTKEKRRVYTQTLLMVSVLCVAWVYFSLVI------SPGEAQLSQLGLTCSVFTISMYLSPLADLLDIMRTKSVERLSFSLTVATFFTSTSWTLYGL 176
BLAST of DR405897 vs. ExPASy Swiss-Prot
Match: R1AP1_HUMAN (RAG1-activating protein 1 OS=Homo sapiens GN=RAG1AP1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.339e-13 Identity = 44/149 (29.53%), Postives = 82/149 (55.03%), Query Frame = 3 Query: 288 KSTESFQSLPYLVALFSSMMWFYYALVKQNAFLLVTINCFGCVIETIYIILFITYAPKGSRNSTVKLFVSMNVGVFSLILLLTHF---LATGSTRILILGWICVAFSVSVFAAPLSIVAQVIRTKSVEFMPFNLSFFLTLSAIMWFAYG 725 +S ++ Q LP+L +++ W Y +K + L+V +N G ++T+YI+ ++ Y P R V L + +GV L+L +F + R+ LG C F++S++ +PL+ +A+VI+TKS + + + L+ L++ W YG Sbjct: 37 RSVDNVQFLPFLTTEVNNLGWLSYGALKGDGILIV-VNTVGAALQTLYILAYLHYCP---RKRVVLLQTATLLGV--LLLGYGYFWLLVPNPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATLLTSASWCLYG 179 The following BLAST results are available for this feature:
BLAST of DR405897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR405897 ID=DR405897; Name=DR405897; organism=Citrus sinensis; type=EST; length=729bpback to top |