DR405880

Overview
NameDR405880
Unique NameDR405880
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5704 contig Csv1_Contig5704:54..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 2.668e-68
Identity = 121/210 (57.62%), Postives = 150/210 (71.43%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEP-SDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIEESYAP 688
            VKDQG CGSCW FST GA+EGIN +VTGDLI+LSEQELVDCDT+ + GC+GG MDYAFE++I NGGIDT+ DYPY GVDGTC+  ++  KVV+ID Y+DV   S+ +L  A   QPIS+ +      FQLY SGI++G C      +DH V+ VGYG+ENG+DYWIV+NSWG SWG  GY  + R+ +   GKC I    SYPI+    P
Sbjct:  152 VKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIFDGSCGTQ---LDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASSSGKCGIAIEPSYPIKNGENP 358          

HSP 2 Score: 25.7942 bits (55), Expect = 2.668e-68
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIV 57
            E P S+DWRK+G V
Sbjct:  136 ELPESIDWRKKGAV 149          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 1.515e-65
Identity = 117/210 (55.71%), Postives = 148/210 (70.48%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEP-SDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIEESYAP 688
            +KDQG CGSCW FS   A+EGIN +VTGDLISLSEQELVDCDT+ + GC+GG MDYAF+++INNGGIDTE DYPY G D  C++ ++  KVV+ID Y+DV P S+++L  A   QP+SV +      FQLY+SGI+ G C      +DH V  VGYG+ENG+DYWIV+NSWG SWG  GY  + R+     GKC I    SYP+++   P
Sbjct:  144 IKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLYSSGIFTGKCGT---ALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGKCGIAVEPSYPLKKGENP 350          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.003e-64
Identity = 116/210 (55.24%), Postives = 150/210 (71.43%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIEESYAP 688
            +KDQG+CGSCW FST  A+EGIN +VTG+L+SLSEQELVDCD + + GC+GG MDYAF++++ NGG++TE DYPY G +G CN   + ++VV+IDGY+DV   D   L  AV  QP+SV +      FQ Y SGI+ G C  +   +DHAV+ VGYGSENG DYWIV+NSWGT WG DGY  + R+ + + GKC I   ASYP++ S  P
Sbjct:  115 IKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGKCGTN---MDHAVVAVGYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVASKSGKCGIAIEASYPVKYSPNP 321          

HSP 2 Score: 22.3274 bits (46), Expect = 1.003e-64
Identity = 7/14 (50.00%), Postives = 11/14 (78.57%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIV 57
            E P ++DWR++G V
Sbjct:   99 EVPVTVDWRQKGAV 112          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 2.895e-64
Identity = 116/211 (54.98%), Postives = 149/211 (70.62%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAVQ-QPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRD-TSLEYGKCAINAMASYPIEESYAP 688
            +KDQG+CGSCW FSTT A+EGIN +VTG+LISLSEQELVDCD + + GC+GG MDYAF++++ NGG++TE DYPY G  G CN   + ++VVSIDGY+DV   D   L  A+  QP+SV +      FQ Y SGI+ G C  +   +DHAV+ VGYGSENG DYWIV+NSWG  WG +GY  + R+  + + GKC I   ASYP++ S  P
Sbjct:  160 IKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTGSCGTN---LDHAVVAVGYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAVEASYPVKYSPNP 367          

HSP 2 Score: 26.1794 bits (56), Expect = 2.895e-64
Identity = 9/20 (45.00%), Postives = 13/20 (65.00%), Query Frame = 1
Query:    4 VQSCEAPSSLDWRKRGIVTP 63
            V   E P ++DWR++G V P
Sbjct:  140 VNGKEVPETVDWRQKGAVNP 159          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 5.958e-62
Identity = 112/211 (53.08%), Postives = 144/211 (68.25%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSY--GCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSDSALLCAAV-QQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIEESYAP 688
            VK+QG CGSCW FS    +E IN LVTG++I+LSEQELV+C T     GC+GG MD AF+++I NGGIDTE DYPY  VDG C+I +E  KVVSIDG++DV  +D   L  AV  QP+SV +     +FQLY SG+++G C      +DH V+ VGYG++NG+DYWIV+NSWG  WG  GY  + R+ ++  GKC I  MASYP +    P
Sbjct:  156 VKNQGQCGSCWAFSAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGRCGTS---LDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMMASYPTKSGANP 363          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.264e-61
Identity = 115/215 (53.49%), Postives = 148/215 (68.84%), Query Frame = 2
Query:   53 SLLLVKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDT--TSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVD-GTCNITKEE-TKVVSIDGYKDVEPSDSALLCAAV-QQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIEESY 682
            +++ VKDQG+CGSCW FS  GA+EGIN + TG+LISLSEQELVDCD    + GCDGG M+YAFE+++ NGGI+T+ DYPY   D G CN  K   T+VV+IDGY+DV   D   L  AV  QP+SV +  S+  FQLY SG+  G C      +DH V++VGYGS +GEDYWI++NSWG +WG  GY  + R+    +GKC I  M SYP + S+
Sbjct:  141 AVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVMTGTCGIS---LDHGVVVVGYGSTSGEDYWIIRNSWGLNWGDSGYVKLQRNIDDPFGKCGIAMMPSYPTKSSF 352          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 3.747e-61
Identity = 110/203 (54.19%), Postives = 136/203 (67.00%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDV-EPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            VKDQG CGSCW FST  A+EGIN + TG+L SLSEQEL+DCDTT + GC+GG MDYAF+++I+ GG+  E DYPY   +G C   KE+ + V+I GY+DV E  D +L+ A   QP+SV +  S  DFQ Y  G++NG C  D   +DH V  VGYGS  G DY IVKNSWG  WG  G+  + R+T    G C IN MASYP
Sbjct:  152 VKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNGKCGTD---LDHGVAAVGYGSSKGSDYVIVKNSWGPRWGEKGFIRMKRNTGKPEGLCGINKMASYP 351          

HSP 2 Score: 26.9498 bits (58), Expect = 3.747e-61
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTP 63
            + P S+DWRK+G V P
Sbjct:  136 DLPKSVDWRKKGAVAP 151          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 4.885e-61
Identity = 109/203 (53.69%), Postives = 144/203 (70.94%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVEPSD-SALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYP 667
            VK+QGSCGSCW FST  A+EGIN +VTG+L +LSEQEL+DCDTT + GC+GG MDYAFE+++ NGG+  E DYPY+  +GTC + K+E++ V+I+G++DV  +D  +LL A   QP+SV +  S  +FQ Y+ G+++G C  D   +DH V  VGYGS  G DY IVKNSWG  WG  GY  + R+T    G C IN MAS+P
Sbjct:  153 VKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVAIDASGREFQFYSGGVFDGRCGVD---LDHGVAAVGYGSSKGSDYIIVKNSWGPKWGEKGYIRLKRNTGKPEGLCGINKMASFP 352          

HSP 2 Score: 23.8682 bits (50), Expect = 4.885e-61
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1
Query:   22 PSSLDWRKRGIV 57
            P S+DWRK+G V
Sbjct:  139 PKSVDWRKKGAV 150          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.850e-60
Identity = 109/205 (53.17%), Postives = 143/205 (69.76%), Query Frame = 2
Query:   65 VKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTTSYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDV-EPSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIEE 676
            VK+QG CGSCW FST  A+EGIN +VTGDLISLSEQ+LVDC T ++GC GG+M+ AF++++NNGGI++E  YPY G DG CN T     VVSID Y++V   ++ +L  A   QP+SV M  +  DFQLY SGI+ G C+      +HA+ +VGYG+EN +D+WIVKNSWG +WG  GY    R+     GKC I   ASYP+++
Sbjct:   18 VKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQDGICNST-VNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCN---ISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVKK 218          

HSP 2 Score: 25.0238 bits (53), Expect = 1.850e-60
Identity = 8/16 (50.00%), Postives = 11/16 (68.75%), Query Frame = 1
Query:   16 EAPSSLDWRKRGIVTP 63
            + P S+DWR+ G V P
Sbjct:    2 DLPDSIDWRENGAVVP 17          
BLAST of DR405880 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.179e-59
Identity = 113/213 (53.05%), Postives = 142/213 (66.67%), Query Frame = 2
Query:   56 LLLVKDQGSCGSCWXFSTTGAIEGINALVTGDLISLSEQELVDCDTT-SYGCDGGYMDYAFEWVINNGGIDTESDYPYTGVDGTCNITKEETKVVSIDGYKDVE-PSDSALLCAAVQQPISVGMVGSASDFQLYTSGIYNGDCSNDPYYIDHAVLIVGYGSENGEDYWIVKNSWGTSWGIDGYFYITRDTSLEYGKCAINAMASYPIEESYAP 688
            L+ VKDQGSCGSCW FS   A+E INA+VTG+LISLSEQELVDCD + + GCDGG MDYAFE+VI NGGIDTE DYPY   +G C+  ++  KVV ID Y+DV   ++ AL  A   QP+S+ +     DFQ Y SGI+ G C      +DH V+I GYG+ENG DYWIV+NSWG +   +GY  + R+ S   G C +    SYP++    P
Sbjct:   30 LVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGT---AVDHGVVIAGYGTENGMDYWIVRNSWGANCRENGYLRVQRNVSSSSGLCGLAIEPSYPVKTGPNP 239          

HSP 2 Score: 23.0978 bits (48), Expect = 1.179e-59
Identity = 6/12 (50.00%), Postives = 11/12 (91.67%), Query Frame = 1
Query:   22 PSSLDWRKRGIV 57
            P S+DWR++G++
Sbjct:   19 PESIDWREKGVL 30          
The following BLAST results are available for this feature:
BLAST of DR405880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
RD21A_ARATH2.668e-6857.62Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
ORYA_ORYSJ1.515e-6555.71Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CYSP4_BRANA1.003e-6455.24Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
GCP1_ARATH2.895e-6454.98Germination-specific cysteine protease 1 OS=Arabid... [more]
ORYB_ORYSJ5.958e-6253.08Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CPR1_ARATH2.264e-6153.49Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
XCP1_ARATH3.747e-6154.19Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
XCP2_ARATH4.885e-6153.69Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CPGP2_ZINOF1.850e-6053.17Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CYSPL_SOLLC1.179e-5953.05Low-temperature-induced cysteine proteinase (Fragm... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248B01 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248B01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405880 ID=DR405880; Name=DR405880; organism=Citrus sinensis; type=EST; length=688bp
GGGGTACAATCATGCGAAGCACCATCGAGCTTGGATTGGAGGAAAAGGGG
AATCGTTACTCCTAGTTAAGGACCAAGGAAGCTGTGGAAGTTGTTGGNNG
TTCTCTACGACTGGAGCCATTGAAGGAATAAATGCCTTGGTCACTGGAGA
CCTCATTAGCCTTTCGGAACAAGAACTCGTGGATTGTGATACCACAAGCT
ATGGATGTGATGGAGGCTACATGGACTATGCATTTGAATGGGTTATTAAC
AACGGTGGAATCGACACAGAATCTGATTATCCTTACACTGGTGTCGATGG
TACCTGCAATATCACCAAGGAGGAAACCAAAGTTGTATCTATTGATGGTT
ATAAAGATGTAGAGCCATCCGATAGTGCACTGCTATGTGCTGCAGTTCAA
CAACCGATTAGCGTTGGCATGGTTGGCTCTGCAAGTGATTTTCAGCTATA
TACAAGTGGAATTTACAATGGTGACTGTTCCAACGACCCATATTACATTG
ATCATGCGGTTTTGATAGTTGGTTATGGCTCTGAAAATGGTGAAGATTAT
TGGATTGTAAAGAATTCTTGGGGAACAAGTTGGGGAATTGACGGATACTT
TTACATAACAAGGGACACCAGTTTAGAATATGGTAAATGTGCCATCAATG
CTATGGCTTCTTATCCAATCGAAGAATCCTATGCACCA
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