DR405867
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EIF3F_ARATH (Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis thaliana GN=TIF3F1 PE=2 SV=1) HSP 1 Score: 377.096 bits (967), Expect = 5.790e-104 Identity = 179/244 (73.36%), Postives = 210/244 (86.07%), Query Frame = 3 Query: 45 AASDRTVLQF----GPSSAVTSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVAS 764 A S+ T+LQF +SA TS +TA++HPLVIFN+ DC+VRRPD AERVIGTLLGS+LPDGTVDIRNSY VPHNE SDQVA+DI+YHH ML SHLKVN +E IVGW+STG GV GGS+LIH+FY REVPNP+HLTVDTGF NGEGT+KA+VS NLSLGDRQL A FQEIP+DLRM++AERVGFD+LK+TSVDKLP+DLEGME+ MERLLTLIND+YKYVD V G PDN++GR +++ VAS Sbjct: 3 ATSEHTILQFVSPSSTASATTSVLTARIHPLVIFNVCDCFVRRPDSAERVIGTLLGSILPDGTVDIRNSYAVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFYAREVPNPIHLTVDTGFTNGEGTIKAFVSSNLSLGDRQLVAHFQEIPVDLRMVDAERVGFDVLKATSVDKLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIADAVAS 246
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EIF3F_PANTR (Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes GN=EIF3F PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.700e-43 Identity = 88/221 (39.82%), Postives = 135/221 (61.09%), Query Frame = 3 Query: 111 KVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKST-----SVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETV 758 ++HP+++ +I D Y RR + A RVIGTLLG+V +V++ N + VPHNE D+VA+D+E+ M + H KV+P E+I+GW++TG +T S LIHE+Y RE PNP+HLTVDT +NG ++KAYVS + + R + F + + + ER+G D++ T V L SDL+ + R+ ++ + +Y +D + G DN+VGR L V Sbjct: 97 RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLV 316
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EIF3F_MACFA (Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis GN=EIF3F PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.700e-43 Identity = 88/221 (39.82%), Postives = 135/221 (61.09%), Query Frame = 3 Query: 111 KVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKST-----SVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETV 758 ++HP+++ +I D Y RR + A RVIGTLLG+V +V++ N + VPHNE D+VA+D+E+ M + H KV+P E+I+GW++TG +T S LIHE+Y RE PNP+HLTVDT +NG ++KAYVS + + R + F + + + ER+G D++ T V L SDL+ + R+ ++ + +Y +D + G DN+VGR L V Sbjct: 97 RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLV 316
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EIF3F_HUMAN (Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens GN=EIF3F PE=1 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.700e-43 Identity = 88/221 (39.82%), Postives = 135/221 (61.09%), Query Frame = 3 Query: 111 KVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKST-----SVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETV 758 ++HP+++ +I D Y RR + A RVIGTLLG+V +V++ N + VPHNE D+VA+D+E+ M + H KV+P E+I+GW++TG +T S LIHE+Y RE PNP+HLTVDT +NG ++KAYVS + + R + F + + + ER+G D++ T V L SDL+ + R+ ++ + +Y +D + G DN+VGR L V Sbjct: 93 RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLV 312
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EIF3F_MOUSE (Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus GN=Eif3f PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.444e-43 Identity = 88/221 (39.82%), Postives = 136/221 (61.54%), Query Frame = 3 Query: 111 KVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKST-----SVDKLPSDLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETV 758 ++HP+++ +I D Y RR + A RVIGTLLG+V +V++ N + VPHNE D+VA+D+E+ M + H KV+P E+I+GW++TG +T S LIHE+Y RE PNP+HLTVDTG ++G ++KAYVS + + R + F + + + ER+G D++ T V L SDL+ + R+ ++ + +Y +D + G DN+VGR L V Sbjct: 97 RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSRESPNPIHLTVDTGLQHGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLV 316
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EI3F1_DROAN (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila ananassae GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.694e-42 Identity = 95/232 (40.95%), Postives = 133/232 (57.33%), Query Frame = 3 Query: 99 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVAS 764 N+T +VHP+V+F + D Y RR + RVIGTLLGSV G V++ N + VPH E DQV ++ Y M + KVNP E +VGW++TG VT S++IHE+Y RE NPVHLTVDT + G ++AYV + L + + F IP++L E E G +L+ T V P+ DL + ++L L++ I KYVDD + PDN+VGR L + + S Sbjct: 5 NLTVRVHPVVLFQVVDAYERRNADSHRVIGTLLGSV-DKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNPNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASQKLQQLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHS 234
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EI3F1_DROGR (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila grimshawi GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.085e-41 Identity = 93/231 (40.26%), Postives = 133/231 (57.58%), Query Frame = 3 Query: 99 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKST---SVDKLPS------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVAS 764 N+T +VHP+V+F + D + RR + RVIGTLLGSV G V++ N + VPH E DQV ++ Y M + KVN E +VGW++TG VT S++IHE+Y RE NPVHLTVDT + G ++AYV + L + + F IP++L E E G +L+ T S + P DL + ++L +L++ I KYVDD + PDN+VGR L + + S Sbjct: 5 NLTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSV-DKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKTGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAQRPKTVPPMLDLAQISEASQKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHS 234
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EI3F1_DROPS (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila pseudoobscura pseudoobscura GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.335e-41 Identity = 92/232 (39.66%), Postives = 133/232 (57.33%), Query Frame = 3 Query: 99 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVAS 764 N+T +VHP+V+F + D + RR ++ RVIGTLLGSV G V++ N + VPH E DQV ++ Y M + KVN E +VGW++TG VT S++IHE+Y RE NPVHLTVDT + G +++YV + L + + F IP++L E E G +L+ T V P+ DL + +L +L++ I KYVDD + PDN+VGR L + + S Sbjct: 5 NLTVRVHPVVLFQVVDAFERRNAESHRVIGTLLGSV-EKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNEAVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRSYVCIQLGVPGGKTGCMFTPIPVELTSYEPETFGLKLLQKT-VGVAPANRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHS 234
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EI3F1_DROPE (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila persimilis GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.335e-41 Identity = 92/232 (39.66%), Postives = 133/232 (57.33%), Query Frame = 3 Query: 99 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVAS 764 N+T +VHP+V+F + D + RR ++ RVIGTLLGSV G V++ N + VPH E DQV ++ Y M + KVN E +VGW++TG VT S++IHE+Y RE NPVHLTVDT + G +++YV + L + + F IP++L E E G +L+ T V P+ DL + +L +L++ I KYVDD + PDN+VGR L + + S Sbjct: 5 NLTVRVHPVVLFQVVDAFERRNAESHRVIGTLLGSV-EKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNEAVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRSYVCIQLGVPGGKTGCMFTPIPVELTSYEPETFGLKLLQKT-VGVAPANRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHS 234
BLAST of DR405867 vs. ExPASy Swiss-Prot
Match: EIF3F_AEDAE (Eukaryotic translation initiation factor 3 subunit F OS=Aedes aegypti GN=eIF3-S5 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.188e-40 Identity = 93/232 (40.09%), Postives = 134/232 (57.76%), Query Frame = 3 Query: 99 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDIL-KSTSVDKLPS---------DLEGMEVLMERLLTLINDIYKYVDDTVEGHAVPDNSVGRILSETVAS 764 N+T +VHP+V+F I D Y RR +ERVIGTLLGSV G V++ N + VPH E +DQV ++ Y + + +VNP E IVGW++TG VT S++IHE+Y RE NP+HLT+DT +KAYV V+L + + F I +++ E E VG + K+ V + S DL + ++LLTL+ ++ YV+D + PDNSVGR L + + S Sbjct: 9 NLTVRVHPVVLFQIVDAYERRNADSERVIGTLLGSV-DKGVVEVTNCFCVPHKEHADQVEAELGYASDLYDLNRRVNPSENIVGWWATGQEVTNHSSVIHEYYARECNNPIHLTLDTSLSAARMGIKAYVCVSLGVPGGKTGCMFTPINVEISSYEPEVVGLQLCSKTIGVQQNASRPRTVSPMLDLAQITEASDKLLTLLGEVLNYVEDVLAEKQQPDNSVGRALLDLIHS 239 The following BLAST results are available for this feature:
BLAST of DR405867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR405867 ID=DR405867; Name=DR405867; organism=Citrus sinensis; type=EST; length=765bpback to top |