DR405273

Overview
NameDR405273
Unique NameDR405273
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR405273 vs. ExPASy Swiss-Prot
Match: CQ095_XENLA (UPF0563 protein C17orf95 homolog OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 38/118 (32.20%), Postives = 59/118 (50.00%), Query Frame = 1 
Query:  301 DKPSFSIAIIENMKEEYGLFVWPCSVILAEYVWQQRYRFSGANVVEAYAXXXXXXXXXXXXSC*XXXXXXXXXXXXGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKL 654
            D+    + I E +  +YG++VWPC+V+LA+Y+W  R   +   V+E                              GAG SLPG++AAK G+ V L+D +   + L+N RR C+MN +
Sbjct:   23 DEQKMRVTIPEVLNCQYGMYVWPCAVVLAQYLWYHRKNLADKRVLEV-----------------------------GAGVSLPGILAAKCGAKVILSDSAEMPQCLENCRRSCKMNNI 111
The following BLAST results are available for this feature:
BLAST of DR405273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CQ095_XENLA9.436e-1332.20UPF0563 protein C17orf95 homolog OS=Xenopus laevis... [more]
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Properties
Property NameValue
Genbank descriptionCSAB-PNP1240P04 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240P04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405273 ID=DR405273; Name=DR405273; organism=Citrus sinensis; type=EST; length=721bp
TTTTTTTTTTTTTTTTTTTTAAAACATAAATGAATTATTTAGAAAAGGGA
TTATGAAAAATTAGTTAAAAGTTGACTTAAGTTATACGTAAATATGTATG
TATACGTATAATTTGATCGAGAAATAATTTTTTTATAAAAAAAAATCTTT
TAATTGATAGATCAGAGAAAGCATAGCACCTCAGTTGGCGCCTAGCTTAA
GCGCCACCGGATGAGGGACGTTGGTTCTGATAAGGACGAGGATGAAATGA
CCGATAAGCACATGACCACGGTATCTCAGCATTATTTCGTCGATGAATCG
GATAAACCCTCCTTCTCTATCGCTATCATTGAGAATATGAAAGAAGAATA
CGGGCTGTTCGTATGGCCCTGTAGTGTTATCCTGGCGGAGTATGTTTGGC
AACAGAGATATCGCTTTTCCGGGGCGAACGTAGTTGAGGCATATGCAATT
CCGATCCTCATTCAGCTTATCATTAATCAATAATCGTGTTGATAAATGTT
GTTTACATGATTGCTAGTTTTGCAGCTCGGTGCAGGAACTTCATTGCCTG
GATTGGTAGCAGCAAAAGTGGGATCGAATGTCACTCTTACTGATGATTCC
AATAGGATAGAGGTGCTGAAGAACATGAGAAGAGTCTGCGAAATGAATAA
ATTGAACTGTAGAGTAAATTATCGCAATTTTTAACTGTTTCACATATTTA
CCCTGCCAGTTTTCTGCTTGT
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