DR404975

Overview
NameDR404975
Unique NameDR404975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6928 contig Csv1_Contig6928:14..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.975e-63
Identity = 124/208 (59.62%), Postives = 154/208 (74.04%), Query Frame = 2
Query:  107 LFLFLILS-PAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDS-DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            L LFL++S     +  NDGL+R+GL+K KLD  NRL  +  SK+ E ++   R+YN  G+LG+S DTDIVAL N++DAQY+GE++IGTP Q FTVIFDTGSSNLWV   +C FSV                 +NG SA+I+YGTGA+SGFFS DNVKVGDLVVK Q FIEAT+E S+TFL AKFDG+LGLGFQEI++G A+PVWYNM+
Sbjct:   11 LCLFLLVSFNIVSSASNDGLLRVGLKKIKLDPENRLAARVESKDAEILKAAFRKYNPKGNLGESSDTDIVALKNYLDAQYYGEIAIGTPPQKFTVIFDTGSSNLWV-LCECLFSVACHFHARYKSSRSSSYKKNGTSASIRYGTGAVSGFFSYDNVKVGDLVVKEQVFIEATREPSLTFLVAKFDGLLGLGFQEIAVGNAVPVWYNMV 217          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 4.096e-59
Identity = 122/218 (55.96%), Postives = 154/218 (70.64%), Query Frame = 2
Query:   74 MGTKFTA-IRVALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            MGT+  A + +A  L   L PA+ A   +GLVRI L+K+ +D+ +R+  + +S EE   R  +R  N  G  G  + DIVAL N+M+AQYFGE+ +GTP Q FTVIFDTGSSNLWVPSAKCYFS+                 +NG  AAIQYGTG+I+GFFS+D+V VGDLVVK+Q+FIEATKE  +TF+ AKFDGILGLGFQEIS+G A+PVWY M+
Sbjct:    1 MGTRSVALVLLAAVLLQALLPASAA---EGLVRIALKKRPIDENSRVAAR-LSGEEGARRLGLRGANSLGG-GGGEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACFFHSRYKSGQSSTYQKNGKPAAIQYGTGSIAGFFSEDSVTVGDLVVKDQEFIEATKEPGLTFMVAKFDGILGLGFQEISVGDAVPVWYKMV 213          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 1.556e-58
Identity = 113/183 (61.75%), Postives = 136/183 (74.32%), Query Frame = 2
Query:  176 LRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            L+K+K++ +N   G+     +   R   R+Y + G+  DSD +++AL N+MDAQYFGE+ IGTP Q FTVIFDTGSSNLWVPS+KCYFSV                 +NG SAAIQYGTG+ISGFFSQD+VK+GDL+VK QDFIEATKE  ITFLAAKFDGILGLGFQEIS+G A+PVWY ML
Sbjct:    1 LKKRKVNILNH-PGEHAGSNDANAR---RKYGVRGNFRDSDGELIALKNYMDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSVACLFHSKYRSTDSTTYKKNGKSAAIQYGTGSISGFFSQDSVKLGDLLVKEQDFIEATKEPGITFLAAKFDGILGLGFQEISVGDAVPVWYTML 179          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.247e-57
Identity = 115/220 (52.27%), Postives = 151/220 (68.64%), Query Frame = 2
Query:   74 MGTKFTAIRVALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRT---PVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            MGT+  A+ +   + L+ +    A   +GLVRI L+K+ +D+ +R+       EE+ + +   P+R         + + DIVAL N+M+AQYFGE+ +GTP Q FTVIFDTGSSNLWVPSAKCYFS+                 +NG  AAIQYGTG+I+G+FS+D+V VGDLVVK+Q+FIEATKE  ITFL AKFDGILGLGF+EIS+GKA+PVWY M+
Sbjct:    1 MGTRGLALALLAAVLLLQTVLPAASEAEGLVRIALKKRPIDRNSRVATGLSGGEEQPLLSGANPLR--------SEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMI 212          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 9.464e-48
Identity = 94/190 (49.47%), Postives = 125/190 (65.79%), Query Frame = 2
Query:  152 NDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNM 721
            +DG +R+ L KK+LD+ +    +   +    ++T           G SD+D V L ++++ QY+G + +G+P Q FTVIFDTGSSNLWVPSAKCYFS+                  +G +  I YG+GAISGFFS+DNV VGDLVVKNQ FIEAT+E S+TF+  KFDGILGLG+ EIS+GKA P+W +M
Sbjct:   26 SDGFLRVNLNKKRLDKEDLTAAKLAQQGNRLLKT-----------GSSDSDPVPLVDYLNTQYYGVIGLGSPPQNFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYNSKKSSSYKADGETCKITYGSGAISGFFSKDNVLVGDLVVKNQKFIEATRETSVTFIIGKFDGILGLGYPEISVGKAPPIWQSM 204          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CATD_CHIHA (Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 6.363e-36
Identity = 85/206 (41.26%), Postives = 120/206 (58.25%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVR-RYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            + L+   +A AL ND LVRI L  KK   I R +  +  + EE +      +YNL     ++ T    L N++DAQY+GE+ +GTP Q FTV+FDTGSSNLWVPS  C    +                 +NG + AIQYG+G++SG+ SQD   +GDL + +Q F EA K+  + F+AAKFDGILG+ +  IS+    PV+ N++
Sbjct:    3 MLLLCVFSALALTNDALVRIPL--KKFRSIRRQLTDSGKRAEELLADHHSLKYNLSFPASNAPTP-ETLKNYLDAQYYGEIGLGTPPQPFTVVFDTGSSNLWVPSIHCSLLDIACLLHHKYNSGKSSTYVKNGTAFAIQYGSGSLSGYLSQDTCTIGDLAIDSQLFGEAIKQPGVAFIAAKFDGILGMAYPRISVDGVAPVFDNIM 205          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CATD_CLUHA (Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.387e-35
Identity = 84/206 (40.78%), Postives = 118/206 (57.28%), Query Frame = 2
Query:  110 FLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFS-VXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            FL+L L  A FA  +D +VRI L  KK   I R +  +    E+ +       +  G    +      L N+MDAQY+GE+ +GTP Q FTV+FDTGSSNLW+PS  C F+ +                 +NG   AIQYG+G++SG+ SQD+  +GD+VV+ Q F EA K+  + F+AAKFDGILG+ +  IS+    PV+  M+
Sbjct:    3 FLYLFLF-AVFAWTSDAIVRIPL--KKFRSIRRTLSDSGLNVEQLLAGTNSLQHNQGFPSSNAPTPETLKNYMDAQYYGEIGLGTPVQMFTVVFDTGSSNLWLPSIHCSFTDIACLLHHKYNGAKSSTYVKNGTEFAIQYGSGSLSGYLSQDSCTIGDIVVEKQLFGEAIKQPGVAFIAAKFDGILGMAYPRISVDGVPPVFDMMM 205          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CATD_CHICK (Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.200e-34
Identity = 72/138 (52.17%), Postives = 90/138 (65.22%), Query Frame = 2
Query:  314 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYF-SVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            L N+MDAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS  C+   +                  NG   AI YGTG++SGF SQD V +G+L +KNQ F EA K+  ITF+AAKFDGILG+ F  IS+ K  P + N++
Sbjct:   70 LKNYMDAQYYGEIGIGTPPQKFTVVFDTGSSNLWVPSVHCHLLDIACLLHHKYDASKSSTYVENGTEFAIHYGTGSLSGFLSQDTVTLGNLKIKNQIFGEAVKQPGITFIAAKFDGILGMAFPRISVDKVTPFFDNVM 207          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CATD_RAT (Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.673e-34
Identity = 81/199 (40.70%), Postives = 116/199 (58.29%), Query Frame = 2
Query:  152 NDGLVRIGLRKKKLDQINRLVGQTV-SKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKV------GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            +  L+RI LRK     I R + +   S E+  ++ P+ +Y++  S    +     L N++DAQY+GE+ IGTP Q FTV+FDTGSSNLWVPS  C    +                 +NG S  I YG+G++SG+ SQD V V      G + V+ Q F EATK+  + F+AAKFDGILG+G+  IS+ K +PV+ N++
Sbjct:   18 SSALIRIPLRK--FTSIRRTMTEVGGSVEDLILKGPITKYSMQSSPRTKEPVSELLKNYLDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWVHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSDLGGIKVEKQIFGEATKQPGVVFIAAKFDGILGMGYPFISVNKVLPVFDNLM 214          
BLAST of DR404975 vs. ExPASy Swiss-Prot
Match: CATD_DICDI (Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.673e-34
Identity = 80/167 (47.90%), Postives = 99/167 (59.28%), Query Frame = 2
Query:  227 SKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXX-RNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNML 724
            +  E   R P +  N   +L    T  + +++F DAQY+G ++IGTP Q F V+FDTGSSNLW+PS KC  +V                   NG    IQYG+GA+SGF SQD+V VG L VK+Q F EAT E  I F  AKFDGILGL FQ IS+    PV+YNML
Sbjct:   28 ASRESRRRVPQKWSNRLSALNAGTT--IPISDFEDAQYYGAITIGTPGQAFKVVFDTGSSNLWIPSKKCPITVVACDLHNKYNSGASSTYVANGTDFTIQYGSGAMSGFVSQDSVTVGSLTVKDQLFAEATAEPGIAFDFAKFDGILGLAFQSISVNSIPPVFYNML 192          
The following BLAST results are available for this feature:
BLAST of DR404975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
ASPR_CUCPE7.975e-6359.62Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPR1_ORYSJ4.096e-5955.96Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
CYPR1_CYNCA1.556e-5861.75Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPR_HORVU2.247e-5752.27Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPRX_ORYSJ9.464e-4849.47Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
CATD_CHIHA6.363e-3641.26Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV... [more]
CATD_CLUHA5.387e-3540.78Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1[more]
CATD_CHICK1.200e-3452.17Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1[more]
CATD_RAT2.673e-3440.70Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1[more]
CATD_DICDI2.673e-3447.90Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE... [more]

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Properties
Property NameValue
Genbank descriptionCSAA-PNP1239P21 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone CSAA-PNP1239P21 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404975 ID=DR404975; Name=DR404975; organism=Citrus sinensis; type=EST; length=741bp
GGGGGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCTCT
TTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATTCGG
GTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTTGCC
AAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGATCAGA
TCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAGA
ACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGATAC
TGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAGG
TTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGGA
AGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTTG
CTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGGA
ATGGGGCATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTTC
TTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGA
TTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGT
TTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAATTGGAAAAGCC
ATTCCAGTCTGGTATAATATGCTTTGATTAAGGTCTCGTTA
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