DR404964
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404964 vs. ExPASy Swiss-Prot
Match: HRP1_YEAST (Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae GN=HRP1 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.221e-37 Identity = 81/175 (46.29%), Postives = 116/175 (66.29%), Query Frame = 1 Query: 157 KIFIGGLPKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVSEDELKNFFSKYGKVLEHQIIRDHETNRSRGFGFVIFDSEEVVDEMLSKGNMIDMAGTQVEIKKAEPK----KSSN 669 K+FIGGL DTT ++FGKYG +TD IMKD TG+ RGFGF+++ PS VD+V++ HI++GK ++ KR IP+ + KT KIFVGGI V E + FFS++G +++ Q++ D +T +SRGFGFV +DS + VD + + ID ++EIK+AEP+ KSSN Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPR----DEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDR-VCQNKFIDFKDRKIEIKRAEPRHMQQKSSN 329 HSP 2 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 33/79 (41.77%), Postives = 49/79 (62.03%), Query Frame = 1 Query: 154 GKIFIGGLPKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHI-INGKQVEIKRTIPK 387 GKIF+GG+ D F + F ++G I D+ +M D+ TGQ RGFGF+TY VD+V ++ I +++EIKR P+ Sbjct: 243 GKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR 321 HSP 3 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 34/100 (34.00%), Postives = 61/100 (61.00%), Query Frame = 1 Query: 358 QVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVSEDELKNFFSKYGKVLEHQIIRDHETNRSRGFGFVIFDSEEVVDEMLSKGNMIDMAGTQVEIKKAEPK 657 Q ++ +T + S ++ K+F+GG+ +ED L+ +F KYG V + +I++D T RSRGFGF+ F+ VDE++ +++D G ++ K+A P+ Sbjct: 139 QQQVTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILD--GKVIDPKRAIPR 236
BLAST of DR404964 vs. ExPASy Swiss-Prot
Match: RB27C_DROME (Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster GN=Hrb27C PE=1 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 1.219e-35 Identity = 73/172 (42.44%), Postives = 119/172 (69.19%), Query Frame = 1 Query: 154 GKIFIGGLPKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED-THIINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVSEDELKNFFSKYGKVLEHQIIRDHETNRSRGFGFVIFDSEEVVDEMLSKGNMIDMAGTQVEIKKAEPKKSS 666 GK+F+GGL +TT +++F ++GDI D V+MK+ +G+ RGFGF+T+ADP+ V+ V+++ H ++G+ ++ K P+ + K K+F+GG+PS+V+E +L+ FF++YGKV E I+ D E +SRGFGF+ F+ E V+ + ++ I++ G QVEIKKAEP+ S Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE-RYINLNGKQVEIKKAEPRDGS 177
BLAST of DR404964 vs. ExPASy Swiss-Prot
Match: MSIR6_DROME (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster GN=Rbp6 PE=1 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 1.219e-35 Identity = 77/192 (40.10%), Postives = 128/192 (66.67%), Query Frame = 1 Query: 100 MGSKSKSDNPHTGDGASPGKIFIGGLPKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVSEDELKNFFSKYGKVLEHQIIRDHETNRSRGFGFVIFDSEEVVDEMLSKGNMIDMAGTQVEIKKAEPKKSSNP 672 +G S S+ P+ PGK+FIGGL T+ + +FG+YGDI+++++MKD T + RGFGF+T++DP+ VDKV+ + TH ++GK+V+ K P+ + +TKKIFVGG+ + + +++K++F ++G + + ++ D +TNR RGFGFV F SE+VVD+ + + + ++ VE KKA+PK+ P Sbjct: 16 LGPCSPSEVPN-----DPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK-VCEIHFHEINNKMVECKKAQPKEVMLP 201
BLAST of DR404964 vs. ExPASy Swiss-Prot
Match: YHKF_SCHPO (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.546e-35 Identity = 74/192 (38.54%), Postives = 121/192 (63.02%), Query Frame = 1 Query: 103 GSKSKSDNPHTGDGASP-----GKIFIGGLPKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVSEDELKNFFSKYGKVLEHQIIRDHETNRSRGFGFVIFDSEEVVDEMLSKGNMIDMAGTQVEIKKAEPKKS 663 GS + N + SP GK+FIGGL +TT + +F ++G++ D +M+D TG+ RGFGF+T+ +P V++V+ H ++GK ++ KR IP+ + KT K+FVGG+P +E+E +NFF+++G+VL+ ++ D +T R RGFGFV +++E V+ +S+ I + G VE+K+A PK S Sbjct: 141 GSGAMESNEDNAEETSPFNREDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSKEHHLDGKIIDPKRAIPR----EEQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQ-PYITIHGKPVEVKRATPKAS 327
BLAST of DR404964 vs. ExPASy Swiss-Prot
Match: DAZP1_MOUSE (DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.032e-34 Identity = 76/190 (40.00%), Postives = 112/190 (58.95%), Query Frame = 1 Query: 154 GKIFIGGLPKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED-THIINGKQVEIKRTIPKG--------------SGQSKDFKTKKIFVGGIPSSVSEDELKNFFSKYGKVLEHQIIRDHETNRSRGFGFVIFDSEEVVDEMLSKGNMIDMAGTQVEIKKAEPKKSSNPPP 678 GK+F+GGL TT T +F +YG++ D VIMKD+ T Q RGFGF+ + DP+ V V+ H ++G+ ++ K P+G +S K+ KIFVGGIP + E EL+ +F K+G V E +I D E R RGFGF+ F+ E+ VD+ ++ + D+ G +VE+K+AEP+ S N P Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM-HFHDIMGKKVEVKRAEPRDSKNQAP 198 HSP 2 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 139 DGASPGKIFIGGLPKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGS 393 D + KIF+GG+P + ++F K+G +T+ V++ D +PRGFGFIT+ D VD+ + H I GK+VE+KR P+ S Sbjct: 108 DSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDS 193
BLAST of DR404964 vs. ExPASy Swiss-Prot
Match: DAZP1_HUMAN (DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.001e-34 Identity = 75/190 (39.47%), Postives = 113/190 (59.47%), Query Frame = 1 Query: 154 GKIFIGGLPKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED-THIINGKQVEIKRTIPKG--------------SGQSKDFKTKKIFVGGIPSSVSEDELKNFFSKYGKVLEHQIIRDHETNRSRGFGFVIFDSEEVVDEMLSKGNMIDMAGTQVEIKKAEPKKSSNPPP 678 GK+F+GGL TT T +F +YG++ D VIMKD+ T Q RGFGF+ + DP+ V V+ H ++G+ ++ K P+G +S + K+ KIFVGGIP + E EL+ +F K+G V E +I D E R RGFGF+ F+ E+ VD+ ++ + D+ G +VE+K+AEP+ S + P Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM-HFHDIMGKKVEVKRAEPRDSKSQAP 198 HSP 2 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 139 DGASPGKIFIGGLPKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGS 393 D + KIF+GG+P + ++F K+G +T+ V++ D +PRGFGFIT+ D VD+ + H I GK+VE+KR P+ S Sbjct: 108 DNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDS 193
BLAST of DR404964 vs. ExPASy Swiss-Prot
Match: DAZP1_XENLA (DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.687e-34 Identity = 74/195 (37.95%), Postives = 116/195 (59.49%), Query Frame = 1 Query: 142 GASPGKIFIGGLPKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED-THIINGKQVEIKRTIPKG---------------SGQSKDFKTKKIFVGGIPSSVSEDELKNFFSKYGKVLEHQIIRDHETNRSRGFGFVIFDSEEVVDEMLSKGNMIDMAGTQVEIKKAEPKKSSNPPP 678 G GK+F+GGL TT T +F +YG++ D VIMKD+ T Q RGFGF+ + DP+ V V+ H ++G+ ++ K P+G ++++ ++ KIFVGGIP + E ELK +F+++G V E +I D E R RGFGF+ F+ E+ VD+ ++ + D+ G +VE+K+AEP+ S + P Sbjct: 6 GDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM-HFHDIMGKKVEVKRAEPRDSKSQTP 199 HSP 2 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 35/90 (38.89%), Postives = 54/90 (60.00%), Query Frame = 1 Query: 127 PHTGDGASPGKIFIGGLPKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGS 393 P T + S KIF+GG+P + ++F ++G +T+ V++ D +PRGFGFIT+ D VD+ + H I GK+VE+KR P+ S Sbjct: 106 PRTENSRS-NKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDS 194
BLAST of DR404964 vs. ExPASy Swiss-Prot
Match: MSI2H_MOUSE (RNA-binding protein Musashi homolog 2 OS=Mus musculus GN=Msi2 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.393e-33 Identity = 74/191 (38.74%), Postives = 121/191 (63.35%), Query Frame = 1 Query: 106 SKSKSDNPHTGDGASPGKIFIGGLPKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVSEDELKNFFSKYGKVLEHQIIRDHETNRSRGFGFVIFDSEEVVDEMLSKGNMIDMAGTQVEIKKAEPKKSSNPP 675 S S +D+ H PGK+FIGGL T+ + +F K+G+I + ++M+D T + RGFGF+T+ADP+ VDKV+ + H ++ K ++ K P+ + +TKKIFVGG+ ++ +++K +F ++GKV + ++ D TNR RGFGFV F++E+VV E + + + ++ VE KKA+PK+ PP Sbjct: 10 SGSANDSQH-----DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVV-EKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
BLAST of DR404964 vs. ExPASy Swiss-Prot
Match: MSI2H_HUMAN (RNA-binding protein Musashi homolog 2 OS=Homo sapiens GN=MSI2 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.393e-33 Identity = 74/191 (38.74%), Postives = 121/191 (63.35%), Query Frame = 1 Query: 106 SKSKSDNPHTGDGASPGKIFIGGLPKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVSEDELKNFFSKYGKVLEHQIIRDHETNRSRGFGFVIFDSEEVVDEMLSKGNMIDMAGTQVEIKKAEPKKSSNPP 675 S S +D+ H PGK+FIGGL T+ + +F K+G+I + ++M+D T + RGFGF+T+ADP+ VDKV+ + H ++ K ++ K P+ + +TKKIFVGG+ ++ +++K +F ++GKV + ++ D TNR RGFGFV F++E+VV E + + + ++ VE KKA+PK+ PP Sbjct: 10 SGSANDSQH-----DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVV-EKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
BLAST of DR404964 vs. ExPASy Swiss-Prot
Match: MSI1H_RAT (RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus GN=Msi1 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.821e-31 Identity = 69/185 (37.30%), Postives = 118/185 (63.78%), Query Frame = 1 Query: 121 DNPHTGDGASPGKIFIGGLPKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVSEDELKNFFSKYGKVLEHQIIRDHETNRSRGFGFVIFDSEEVVDEMLSKGNMIDMAGTQVEIKKAEPKKSSNP 672 D+PH P K+FIGGL TT ++FG++G++ + ++M+D T + RGFGF+T+ D + VDKV+ + H ++ K ++ K P+ + +TKKIFVGG+ + + +++K++F ++GKV + ++ D TNR RGFGFV F+SE++V E + + + ++ VE KKA+PK+ +P Sbjct: 14 DSPH-----DPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIV-EKVCEIHFHEINNKMVECKKAQPKEVMSP 192 The following BLAST results are available for this feature:
BLAST of DR404964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR404964 ID=DR404964; Name=DR404964; organism=Citrus sinensis; type=EST; length=680bpback to top |