DR404961

Overview
NameDR404961
Unique NameDR404961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6928 contig Csv1_Contig6928:14..775. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.747e-68
Identity = 134/220 (60.91%), Postives = 165/220 (75.00%), Query Frame = 2
Query:  107 LFLFLILS-PAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDS-DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            L LFL++S     +  NDGL+R+GL+K KLD  NRL  +  SK+ E ++   R+YN  G+LG+S DTDIVAL N++DAQY+GE++IGTP Q FTVIFDTGSSNLWV   +C FSV                 +NG SA+I+YGTGA+SGFFS DNVKVGDLVVK Q FIEAT+E S+TFL AKFDG+LGLGFQEI++G A+PVWYNM++ GLVKEPVFSF
Sbjct:   11 LCLFLLVSFNIVSSASNDGLLRVGLKKIKLDPENRLAARVESKDAEILKAAFRKYNPKGNLGESSDTDIVALKNYLDAQYYGEIAIGTPPQKFTVIFDTGSSNLWV-LCECLFSVACHFHARYKSSRSSSYKKNGTSASIRYGTGAVSGFFSYDNVKVGDLVVKEQVFIEATREPSLTFLVAKFDGLLGLGFQEIAVGNAVPVWYNMVEQGLVKEPVFSF 229          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 3.409e-64
Identity = 131/230 (56.96%), Postives = 164/230 (71.30%), Query Frame = 2
Query:   74 MGTKFTA-IRVALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            MGT+  A + +A  L   L PA+ A   +GLVRI L+K+ +D+ +R+  + +S EE   R  +R  N  G  G  + DIVAL N+M+AQYFGE+ +GTP Q FTVIFDTGSSNLWVPSAKCYFS+                 +NG  AAIQYGTG+I+GFFS+D+V VGDLVVK+Q+FIEATKE  +TF+ AKFDGILGLGFQEIS+G A+PVWY M++ GLV EPVFSF
Sbjct:    1 MGTRSVALVLLAAVLLQALLPASAA---EGLVRIALKKRPIDENSRVAAR-LSGEEGARRLGLRGANSLGG-GGGEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACFFHSRYKSGQSSTYQKNGKPAAIQYGTGSIAGFFSEDSVTVGDLVVKDQEFIEATKEPGLTFMVAKFDGILGLGFQEISVGDAVPVWYKMVEQGLVSEPVFSF 225          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 1.296e-63
Identity = 122/195 (62.56%), Postives = 147/195 (75.38%), Query Frame = 2
Query:  176 LRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            L+K+K++ +N   G+     +   R   R+Y + G+  DSD +++AL N+MDAQYFGE+ IGTP Q FTVIFDTGSSNLWVPS+KCYFSV                 +NG SAAIQYGTG+ISGFFSQD+VK+GDL+VK QDFIEATKE  ITFLAAKFDGILGLGFQEIS+G A+PVWY ML+ GLV+EPVFSF
Sbjct:    1 LKKRKVNILNH-PGEHAGSNDANAR---RKYGVRGNFRDSDGELIALKNYMDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSVACLFHSKYRSTDSTTYKKNGKSAAIQYGTGSISGFFSQDSVKLGDLLVKEQDFIEATKEPGITFLAAKFDGILGLGFQEISVGDAVPVWYTMLNQGLVQEPVFSF 191          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.168e-62
Identity = 123/232 (53.02%), Postives = 161/232 (69.40%), Query Frame = 2
Query:   74 MGTKFTAIRVALFLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRT---PVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            MGT+  A+ +   + L+ +    A   +GLVRI L+K+ +D+ +R+       EE+ + +   P+R         + + DIVAL N+M+AQYFGE+ +GTP Q FTVIFDTGSSNLWVPSAKCYFS+                 +NG  AAIQYGTG+I+G+FS+D+V VGDLVVK+Q+FIEATKE  ITFL AKFDGILGLGF+EIS+GKA+PVWY M++ GLV +PVFSF
Sbjct:    1 MGTRGLALALLAAVLLLQTVLPAASEAEGLVRIALKKRPIDRNSRVATGLSGGEEQPLLSGANPLR--------SEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSF 224          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 6.242e-50
Identity = 99/203 (48.77%), Postives = 133/203 (65.52%), Query Frame = 2
Query:  152 NDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            +DG +R+ L KK+LD+ +    +   +    ++T           G SD+D V L ++++ QY+G + +G+P Q FTVIFDTGSSNLWVPSAKCYFS+                  +G +  I YG+GAISGFFS+DNV VGDLVVKNQ FIEAT+E S+TF+  KFDGILGLG+ EIS+GKA P+W +M +  L+ + VFSF
Sbjct:   26 SDGFLRVNLNKKRLDKEDLTAAKLAQQGNRLLKT-----------GSSDSDPVPLVDYLNTQYYGVIGLGSPPQNFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYNSKKSSSYKADGETCKITYGSGAISGFFSKDNVLVGDLVVKNQKFIEATRETSVTFIIGKFDGILGLGYPEISVGKAPPIWQSMQEQELLADDVFSF 217          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CARP_NANOT (Vacuolar protease A OS=Nannizzia otae (strain CBS 113480) GN=PEP2 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.104e-38
Identity = 78/151 (51.66%), Postives = 101/151 (66.89%), Query Frame = 2
Query:  308 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            V ++NF++AQYF E+SIGTP QTF V+ DTGSSNLWVP   C  S+                 RNG S AI+YG+G++ GF SQDNV++GD+ +KNQ F EAT E  + F   +FDGILG+G+  IS+ K  P +Y M++ GLV EPVFSF
Sbjct:   77 VLIDNFLNAQYFSEISIGTPPQTFKVVLDTGSSNLWVPGKDCS-SIACFLHSTYDSSASSTFTRNGTSFAIRYGSGSLEGFVSQDNVQIGDMKIKNQLFAEATSEPGLAFAFGRFDGILGMGYDTISVNKITPPFYKMVEQGLVDEPVFSF 226          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CARP_ASPFU (Vacuolar protease A OS=Aspergillus fumigatus GN=pep2 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.460e-38
Identity = 79/160 (49.38%), Postives = 102/160 (63.75%), Query Frame = 2
Query:  281 SLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            SL D     V ++NF++AQYF E+S+GTP Q F V+ DTGSSNLWVP + C  S+                  NG   AI+YG+G +SGF SQD +++GDL V  QDF EAT E  + F   +FDGILGLG+  IS+ K +P +YNMLD GL+ EPVF+F
Sbjct:   66 SLNDMSRHDVLVDNFLNAQYFSEISLGTPPQKFKVVLDTGSSNLWVPGSDCS-SIACFLHNKYDSSASSTYKANGTEFAIKYGSGELSGFVSQDTLQIGDLKVVKQDFAEATNEPGLAFAFGRFDGILGLGYDTISVNKIVPPFYNMLDQGLLDEPVFAF 224          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CATD_CHIHA (Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 7.159e-38
Identity = 90/218 (41.28%), Postives = 127/218 (58.26%), Query Frame = 2
Query:  113 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVR-RYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            + L+   +A AL ND LVRI L  KK   I R +  +  + EE +      +YNL     ++ T    L N++DAQY+GE+ +GTP Q FTV+FDTGSSNLWVPS  C    +                 +NG + AIQYG+G++SG+ SQD   +GDL + +Q F EA K+  + F+AAKFDGILG+ +  IS+    PV+ N++    V++ VFSF
Sbjct:    3 MLLLCVFSALALTNDALVRIPL--KKFRSIRRQLTDSGKRAEELLADHHSLKYNLSFPASNAPTP-ETLKNYLDAQYYGEIGLGTPPQPFTVVFDTGSSNLWVPSIHCSLLDIACLLHHKYNSGKSSTYVKNGTAFAIQYGSGSLSGYLSQDTCTIGDLAIDSQLFGEAIKQPGVAFIAAKFDGILGMAYPRISVDGVAPVFDNIMSQKKVEQNVFSF 217          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CATD_DICDI (Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.720e-37
Identity = 86/179 (48.04%), Postives = 106/179 (59.22%), Query Frame = 2
Query:  227 SKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXXXX-RNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            +  E   R P +  N   +L    T  + +++F DAQY+G ++IGTP Q F V+FDTGSSNLW+PS KC  +V                   NG    IQYG+GA+SGF SQD+V VG L VK+Q F EAT E  I F  AKFDGILGL FQ IS+    PV+YNML  GLV   +FSF
Sbjct:   28 ASRESRRRVPQKWSNRLSALNAGTT--IPISDFEDAQYYGAITIGTPGQAFKVVFDTGSSNLWIPSKKCPITVVACDLHNKYNSGASSTYVANGTDFTIQYGSGAMSGFVSQDSVTVGSLTVKDQLFAEATAEPGIAFDFAKFDGILGLAFQSISVNSIPPVFYNMLSQGLVSSTLFSF 204          
BLAST of DR404961 vs. ExPASy Swiss-Prot
Match: CATD_CLUHA (Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.060e-37
Identity = 89/218 (40.83%), Postives = 125/218 (57.34%), Query Frame = 2
Query:  110 FLFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFS-VXXXXXXXXXXXXXXXXXRNGASAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLD*GLVKEPVFSF 760
            FL+L L  A FA  +D +VRI L  KK   I R +  +    E+ +       +  G    +      L N+MDAQY+GE+ +GTP Q FTV+FDTGSSNLW+PS  C F+ +                 +NG   AIQYG+G++SG+ SQD+  +GD+VV+ Q F EA K+  + F+AAKFDGILG+ +  IS+    PV+  M+    V++ VFSF
Sbjct:    3 FLYLFLF-AVFAWTSDAIVRIPL--KKFRSIRRTLSDSGLNVEQLLAGTNSLQHNQGFPSSNAPTPETLKNYMDAQYYGEIGLGTPVQMFTVVFDTGSSNLWLPSIHCSFTDIACLLHHKYNGAKSSTYVKNGTEFAIQYGSGSLSGYLSQDSCTIGDIVVEKQLFGEAIKQPGVAFIAAKFDGILGMAYPRISVDGVPPVFDMMMSQKKVEQNVFSF 217          
The following BLAST results are available for this feature:
BLAST of DR404961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
ASPR_CUCPE1.747e-6860.91Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPR1_ORYSJ3.409e-6456.96Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
CYPR1_CYNCA1.296e-6362.56Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPR_HORVU4.168e-6253.02Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPRX_ORYSJ6.242e-5048.77Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
CARP_NANOT1.104e-3851.66Vacuolar protease A OS=Nannizzia otae (strain CBS ... [more]
CARP_ASPFU2.460e-3849.38Vacuolar protease A OS=Aspergillus fumigatus GN=pe... [more]
CATD_CHIHA7.159e-3841.28Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV... [more]
CATD_DICDI2.720e-3748.04Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE... [more]
CATD_CLUHA6.060e-3740.83Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAA-PNP1239P05 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone CSAA-PNP1239P05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404961 ID=DR404961; Name=DR404961; organism=Citrus sinensis; type=EST; length=762bp
GGGGGATTTCTCGGTCTCGTCAGTCCACTTCTTTACTCTGTCTGTGCTCT
TTGAAAGATACTCAGTTGTCGACATGGGAACCAAATTCACAGCCATTCGG
GTTGCACTTTTTCTTTTTCTCATTTTGTCCCCTGCGGCCTTTGCTTTGCC
AAATGATGGATTGGTAAGAATTGGGCTGAGAAAGAAGAAATTGGATCAGA
TCAATCGCCTTGTTGGACAGACTGTATCTAAGGAAGAGGAAACGATGAGA
ACACCTGTCAGAAGATATAATCTCCATGGTAGTCTTGGAGATTCTGATAC
TGATATTGTTGCATTAAATAACTTTATGGATGCTCAGTATTTTGGGGAGG
TTAGTATTGGCACACCTTCCCAGACCTTCACTGTGATATTTGACACAGGA
AGTTCTAATCTTTGGGTGCCTTCTGCGAAGTGTTATTTCTCAGTTTCTTG
CTATTTCCACTCCAAGTATAAGTCCAGCCATTCAAGTACCTACAAAAGGA
ATGGGGCATCTGCCGCAATCCAATATGGGACTGGAGCAATTTCTGGTTTC
TTTAGCCAGGACAATGTGAAAGTTGGTGATCTTGTTGTTAAGAATCAGGA
TTTCATTGAGGCAACCAAAGAAGCTAGCATCACATTCTTGGCAGCCAAGT
TTGATGGTATACTTGGGCTTGGATTTCAAGAGATCTCAATTGGAAAAGCC
ATTCCAGTCTGGTATAATATGCTTGATTAAGGTCTCGTTAAAGAACCAGT
TTTTTCATTTTG
back to top