DR404627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_FRASC (UDP-N-acetylmuramate--L-alanine ligase OS=Frankia sp. (strain CcI3) GN=murC PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.290e-25 Identity = 56/114 (49.12%), Postives = 79/114 (69.30%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 645 KSTT++ML VL+A G D TA++GA V Q G+ G G FVLE+DEY G F GL PS+AV+TN++WEH D+F DE +V++ F F +++R GG LV+CGD ++L ++ Sbjct: 123 KSTTSAMLTLVLRAAGLDPTAVIGAEVSQL-GGNALAGSGDVFVLESDEYGGAFAGLDPSIAVITNVEWEHPDVFPDEASVRTAFAAFARRVRPGGRLVVCGDHPGVVAVLTEL 235
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_FRAAA (UDP-N-acetylmuramate--L-alanine ligase OS=Frankia alni (strain ACN14a) GN=murC PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.290e-25 Identity = 56/114 (49.12%), Postives = 79/114 (69.30%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 645 KSTT++ML VL+A G D TA++GA V Q G+ G G FVLE+DEY G F GL P++AV+TN++WEH DIF DE +V++ F F +++R GG LV+CGD ++L ++ Sbjct: 123 KSTTSAMLTLVLRAAGLDPTAVIGAEVSQL-GGNALAGSGDLFVLESDEYGGAFAGLEPTIAVITNVEWEHPDIFPDEASVRTAFTAFARRVRPGGRLVVCGDDPGVAAVLAEL 235
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_DESDG (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfovibrio desulfuricans (strain G20) GN=murC PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.094e-16 Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT S+ A + G D T I+G + + + G G+ + EADE DG FL LSP V VVTN+D +HVD + D+ A+ + F F+ ++ G V+CGD R LL QIK+ Sbjct: 116 KTTTTSLTAAIFDEAGTDPTVIIGGRLNAYGSNARL-GEGEFLLAEADESDGSFLCLSPVVNVVTNVDLDHVDFYHDQQAIDTAFINFMNKVPFYGMNVVCGDDAGVRRLLPQIKR 230
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_SOLUE (UDP-N-acetylmuramate--L-alanine ligase OS=Solibacter usitatus (strain Ellin6076) GN=murC PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16 Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQDT 657 K+TT SM A +L G D T +VG V + G V+E+DE DG FL L+P +AVVTN+D EH+D + D DA+++ F F+ ++ G +++C D + LL +I++ T Sbjct: 127 KTTTTSMAATILNYAGLDPTVVVGGRVGTMGGSNARVGHSDFLVVESDESDGSFLKLAPIIAVVTNVDREHLDHYPDLDAIRAAFLEFVNKVPFYGAVIVCLDDANVQGLLPEIRRRT 244
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_MYXXD (UDP-N-acetylmuramate--L-alanine ligase OS=Myxococcus xanthus (strain DK 1622) GN=murC PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16 Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT SM+A VL A G D TA+VG V D + G + V+EADE DG FL L PS+A+VTN+D EH+D + D D ++S F F ++ G V+C D+ ++LL +I++ Sbjct: 126 KTTTTSMVATVLSAAGLDPTAVVGGKVNVL-DSNAKLGKSELMVVEADESDGSFLHLHPSIAIVTNIDPEHMDHYGDLDTLQSAFVEFCNRVPFYGLNVLCLDNPNVQALLPRIEK 240
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_ROSCS (UDP-N-acetylmuramate--L-alanine ligase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=murC PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16 Identity = 39/111 (35.14%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLL 636 K+TT +++A +L G ++G P + + V+EADEYD FL L+P +A++TN++WEHVDI+ D ++ FR F +Q+ L++CGD+ AR ++ Sbjct: 111 KTTTTALIALMLTRAGIAPGFLIGGETPDLGVNARWGNPAAPLVVEADEYDRTFLALTPDIAIITNVEWEHVDIYPSPDEYEAAFRTFARQVAHPQRLIVCGDNAGARRVV 221
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_DESAA (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=murC PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16 Identity = 48/116 (41.38%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K+TT S++A VL A G D T ++G + + G G+ V EADE DG FL +SPS+AVVTN+D EH+D ++D D +K F +F+ +I G V+C DS+ + L+ I + Sbjct: 116 KTTTTSIVADVLAAGGLDPTVVIGGKLLSIGSNAKL-GHGEFIVAEADESDGSFLKMSPSIAVVTNIDREHMDHYKDMDEIKDAFAQFVDKIPFYGLSVLCLDSEPVQDLIPFINK 230
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_MYCS2 (UDP-N-acetylmuramate--L-alanine ligase OS=Mycobacterium smegmatis GN=murC PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.210e-15 Identity = 46/113 (40.71%), Postives = 67/113 (59.29%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQ 642 K+TT SML L+ G D + VG + + + +G G FV EADE DG L +P+VAVVTN++ +H+D F E A ++F F+++I GG LV+C D A +L D+ Sbjct: 126 KTTTTSMLIVALQHSGFDPSFAVGGELGEAGTNA-HHGSGTTFVAEADESDGSLLEYTPNVAVVTNIEADHLDFFGSEQAYTAVFDSFVERIAPGGALVVCTDDPGAAALADR 237
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_PELCD (UDP-N-acetylmuramate--L-alanine ligase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=murC PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.064e-15 Identity = 45/114 (39.47%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQI 645 K+TT SM++ VL G D T ++G + + G GK V EADE DG FL LSP +AVVTN+D +H+D + D D +K F F+ +I G ++C D ++L+ Q+ Sbjct: 116 KTTTTSMVSTVLSKSGIDPTVVIGGRLDSIGSNAKL-GQGKFLVAEADESDGSFLKLSPIIAVVTNVDADHLDYYSDLDEIKRTFVDFINKIPFYGVAILCLDDPNVQALIPQV 228
BLAST of DR404627 vs. ExPASy Swiss-Prot
Match: MURC_DESOH (UDP-N-acetylmuramate--L-alanine ligase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=murC PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.064e-15 Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 304 KSTTASMLAYVLKAMGDDLTAIVGAHVPQFPDGSIFYGGGKNFVLEADEYDGCFLGLSPSVAVVTNLDWEHVDIFEDEDAVKSIFRRFLKQIRVGGHLVICGDSQCARSLLDQIKQ 651 K++T SM+A VL G D T ++G + ++ G G V EADE DG FL SPS+AVVTN+D EH+D + D A+ F FL +I G V+C D++ ++L+ IK+ Sbjct: 116 KTSTTSMVASVLGQGGMDPTVVIGGKLKSIGTNAVL-GHGDYIVAEADESDGSFLKFSPSIAVVTNIDREHLDFYPDLAAISKSFLEFLDRIPFYGVAVVCLDNEPLQALVPLIKK 230 The following BLAST results are available for this feature:
BLAST of DR404627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404627 ID=DR404627; Name=DR404627; organism=Citrus sinensis; type=EST; length=726bpback to top |