DR404331

Overview
NameDR404331
Unique NameDR404331
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR404331 vs. ExPASy Swiss-Prot
Match: KDRA_SALG2 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=yfaU PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18
Identity = 46/124 (37.10%), Postives = 74/124 (59.68%), Query Frame = 3 
Query:  360 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYG 731
            K  L+  +T  GL+L S +  +AEI+  +GYD++++D EH P  + D    L A+A   +  ++RL E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G
Sbjct:   10 KEGLREGDTQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTVQDLYHQLQAIAPYASQPVIRLIEGSKALIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPLGQRGVGASVARAARWG 133
[Close]
BLAST of DR404331 vs. ExPASy Swiss-Prot
Match: KDRA_ECOSM (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=yfaU PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 46/124 (37.10%), Postives = 75/124 (60.48%), Query Frame = 3 
Query:  360 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYG 731
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E+  +  K+ LD+G Q ++ PM+D+ + A++ VS  R+PP G RG   +V RA+ +G
Sbjct:   10 KERLRKGEVQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEASKSLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWG 133
[Close]
BLAST of DR404331 vs. ExPASy Swiss-Prot
Match: KDRA_ECOLI (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain K12) GN=yfaU PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 47/124 (37.90%), Postives = 73/124 (58.87%), Query Frame = 3 
Query:  360 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYG 731
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWG 133
[Close]
BLAST of DR404331 vs. ExPASy Swiss-Prot
Match: KDRA_ECOLC (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=yfaU PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 47/124 (37.90%), Postives = 73/124 (58.87%), Query Frame = 3 
Query:  360 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYG 731
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWG 133
[Close]
BLAST of DR404331 vs. ExPASy Swiss-Prot
Match: KDRA_ECOHS (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O9:H4 (strain HS) GN=yfaU PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 47/124 (37.90%), Postives = 73/124 (58.87%), Query Frame = 3 
Query:  360 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYG 731
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWG 133
[Close]
BLAST of DR404331 vs. ExPASy Swiss-Prot
Match: KDRA_ECODH (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain K12 / DH10B) GN=yfaU PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 47/124 (37.90%), Postives = 73/124 (58.87%), Query Frame = 3 
Query:  360 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYG 731
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWG 133
[Close]
BLAST of DR404331 vs. ExPASy Swiss-Prot
Match: KDRA_ECOBW (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain K12 / BW2952) GN=yfaU PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 47/124 (37.90%), Postives = 73/124 (58.87%), Query Frame = 3 
Query:  360 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYG 731
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWG 133
[Close]
BLAST of DR404331 vs. ExPASy Swiss-Prot
Match: KDRA_ECO7I (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=yfaU PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 46/124 (37.10%), Postives = 75/124 (60.48%), Query Frame = 3 
Query:  360 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYG 731
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E+  +  K+ LD+G Q ++ PM+D+ + A++ VS  R+PP G RG   +V RA+ +G
Sbjct:   10 KERLRKGEVQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEASKSLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWG 133
[Close]
BLAST of DR404331 vs. ExPASy Swiss-Prot
Match: KDRA_ECOLU (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=yfaU PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.755e-18
Identity = 46/124 (37.10%), Postives = 74/124 (59.68%), Query Frame = 3 
Query:  360 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYG 731
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E   +  K+ LD+G Q ++ PM+D+ + A++ VS  R+PP G RG   +V RA+ +G
Sbjct:   10 KERLRKGEVQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKSLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWG 133
[Close]
BLAST of DR404331 vs. ExPASy Swiss-Prot
Match: KDRA_ECO57 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O157:H7 GN=yfaU PE=3 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 46/124 (37.10%), Postives = 73/124 (58.87%), Query Frame = 3 
Query:  360 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYG 731
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ + A++ VS  R+PP G RG   +V RA+ +G
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWG 133
The following BLAST results are available for this feature:
BLAST of DR404331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
KDRA_SALG23.481e-1837.102-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella... [more]
KDRA_ECOSM5.938e-1837.102-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECOLI5.938e-1837.902-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECOLC5.938e-1837.902-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECOHS5.938e-1837.902-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECODH5.938e-1837.902-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECOBW5.938e-1837.902-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECO7I5.938e-1837.102-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECOLU7.755e-1837.102-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECO571.323e-1737.102-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]

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Properties
Property NameValue
Genbank descriptionCSAG-PNP1245P22 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245P22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404331 ID=DR404331; Name=DR404331; organism=Citrus sinensis; type=EST; length=738bp
GGGGATGTTTCGGCCAACCTCGTAACAAAAGATACACATATGAGTGGATC
ACTCTCAGAGAGCCCACCGCATTCACACTTGACGAAGACGAACTGAGCAG
AACTGAAACTGAGACAATTACAAAAGCCACCATGACCACACCCACTTGCT
CGGGCTCCGGCACTGCCGCCGCCGTCACCAAACTTGCACAAAATAAGATC
ATTTCATTTCCAAAATCACCCTTGTTCAACCTCAACGGCAACAAATCCAA
AATCGTTTTCCCAAAACTGAAATTGACCCCCTCAGTCTCGCGCTCACCCT
CGGATCTGTCGCCAGGCGATCCCCTTTCCCCATCTCCATCACCCTCGCCC
GAATCACTCAAGTATCGTCTCCAAAGCAACGAAACCCTGTACGGACTCTT
CCTCCTCTCTTTCTCCCCAACTCTTGCCGAAATTTCGGGCCTCGCCGGTT
ACGATTTCGTCGTCGTAGACATGGAGCACGGCCCTGGCGGCATTTCCGAT
GCTCTCGCTTGCCTTCACGCTCTTGCCGCCACGGGGACACCGGCCATTCT
GCGGCTCCCTGAAAGTTGCCCAACTTGGGCTAAAAAGGCCCTCGATCTGG
GCCCACAAGGGGTCATGTTCCCTATGATTGACTCCCCAGAAGCCGCCAAG
GAAGCGGTGTCGTATTGCCGGTTCCCGCCTTCTGGAGTGCGGGGATCCGC
TCACACGGTGGTGAGAGCGTCCGGTTACGGGATTGATG
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