DR404311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NDUV2_ARATH (NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial OS=Arabidopsis thaliana GN=At4g02580 PE=1 SV=3) HSP 1 Score: 343.199 bits (879), Expect = 7.576e-94 Identity = 164/189 (86.77%), Postives = 176/189 (93.12%), Query Frame = 3 Query: 84 EIRQAIR-PSLQASRSFSTALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647 EIRQ R P+ Q +RS STALNYHLDSPDN PDLPW+FS+ N+ KVKEILS+YPSNYKQSAVIPLLDLAQQQ+GGWLPVSAMN VAK+IEVAPIRVYEVATFYSMFNR+KVGKYHLLVCGTTPCM+RGSR+IE ALL HLGVKR EVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNY+ED Sbjct: 12 EIRQVFRQPTSQVTRSLSTALNYHLDSPDNKPDLPWEFSEANQSKVKEILSYYPSNYKQSAVIPLLDLAQQQNGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRAKVGKYHLLVCGTTPCMIRGSRDIESALLDHLGVKRGEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYFED 200
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NDUV2_PONPY (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Pongo pygmaeus GN=NDUFV2 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.654e-48 Identity = 90/170 (52.94%), Postives = 126/170 (74.12%), Query Frame = 3 Query: 138 ALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647 AL H D+P+NNPD P+ F+ N ++++ I+ +YP +K +AV+P+LDLAQ+Q+G WLP+SAMN+VA++++V P+RVYEVATFY+M+NR VGKYH+ VC TTPCM+R S I +A+ K LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED Sbjct: 37 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYED 195
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NDUV2_PANTR (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Pan troglodytes GN=NDUFV2 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.654e-48 Identity = 90/170 (52.94%), Postives = 126/170 (74.12%), Query Frame = 3 Query: 138 ALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647 AL H D+P+NNPD P+ F+ N ++++ I+ +YP +K +AV+P+LDLAQ+Q+G WLP+SAMN+VA++++V P+RVYEVATFY+M+NR VGKYH+ VC TTPCM+R S I +A+ K LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED Sbjct: 37 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYED 195
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NDUV2_HUMAN (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Homo sapiens GN=NDUFV2 PE=1 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.654e-48 Identity = 90/170 (52.94%), Postives = 126/170 (74.12%), Query Frame = 3 Query: 138 ALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647 AL H D+P+NNPD P+ F+ N ++++ I+ +YP +K +AV+P+LDLAQ+Q+G WLP+SAMN+VA++++V P+RVYEVATFY+M+NR VGKYH+ VC TTPCM+R S I +A+ K LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED Sbjct: 37 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYED 195
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NDUV2_GORGO (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFV2 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.654e-48 Identity = 90/170 (52.94%), Postives = 126/170 (74.12%), Query Frame = 3 Query: 138 ALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647 AL H D+P+NNPD P+ F+ N ++++ I+ +YP +K +AV+P+LDLAQ+Q+G WLP+SAMN+VA++++V P+RVYEVATFY+M+NR VGKYH+ VC TTPCM+R S I +A+ K LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED Sbjct: 37 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYED 195
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NDUV2_CAEEL (Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Caenorhabditis elegans GN=F53F4.10 PE=1 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.821e-48 Identity = 93/175 (53.14%), Postives = 124/175 (70.86%), Query Frame = 3 Query: 123 RSFSTALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647 R +T L H D+ +NN ++ +KF+ N+E++K I+ YP +K A+IPLLDLAQ+QHG WLP+SAM+EVAKI+EV +R YEVATFY+MFNR VGKY L VC TTPCM+RG+ I + + K LG+ E TKDGLF++ E+EC+G CVNAPMI + D +Y+ED Sbjct: 21 RGGATGLMVHRDTKENNLNVKFKFTSENQERIKAIMDIYPEGHKAGALIPLLDLAQRQHG-WLPISAMHEVAKILEVPRMRAYEVATFYTMFNRQPVGKYFLQVCATTPCMLRGAETITETIEKKLGIHAGETTKDGLFTLAEVECLGACVNAPMIQIND----------DYFED 184
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NDUV2_BOVIN (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Bos taurus GN=NDUFV2 PE=1 SV=3) HSP 1 Score: 191.43 bits (485), Expect = 3.684e-48 Identity = 90/170 (52.94%), Postives = 126/170 (74.12%), Query Frame = 3 Query: 138 ALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647 AL H D+P+NNP+ P+ F+ N ++++ I+ +YP +K +AV+P+LDLAQ+Q+G WLP+SAMN+VA+I++V P+RVYEVATFY+M+NR VGKYH+ VC TTPCM+R S I +A+ K LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED Sbjct: 37 ALFVHRDTPENNPETPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEILQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYED 195
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NDUV2_MOUSE (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Mus musculus GN=Ndufv2 PE=1 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 2.388e-47 Identity = 88/170 (51.76%), Postives = 125/170 (73.53%), Query Frame = 3 Query: 138 ALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647 AL H D+P+NNPD P+ F+ N ++++ I+ +YP ++ +AV+P+LDLAQ+Q+G WLP+SAMN+VA++++V P+RVYEVATFY+M+NR VGKYH+ VC TTPCM+R S I + L + LG+K E T D LF++ E+EC+G CVNAPM+ + D NYYED Sbjct: 36 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHQAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRDSDSILETLQRKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------NYYED 194
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NDUV2_RAT (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus GN=Ndufv2 PE=1 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 3.119e-47 Identity = 88/170 (51.76%), Postives = 125/170 (73.53%), Query Frame = 3 Query: 138 ALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYED 647 AL H D+P+NNPD P+ F+ N E+++ I+ +YP ++ +AV+P+LDLAQ+Q+G WLP+SAMN+VA++++V P+RVYEVATFY+M+NR VGKYH+ VC TTPCM+R S I + L + LG+K E T D LF++ E+EC+G CVNAPM+ + D +YYED Sbjct: 36 ALFVHRDTPENNPDTPFDFTPENYERIEAIVRNYPEGHRAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRDSDSILETLQRKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQIND----------DYYED 194
BLAST of DR404311 vs. ExPASy Swiss-Prot
Match: NDUV2_NEUCR (NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial OS=Neurospora crassa GN=nuo-24 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.310e-45 Identity = 89/184 (48.37%), Postives = 129/184 (70.11%), Query Frame = 3 Query: 117 ASRSFSTALNYHLDSPDNNPDLPWKFSDTNKEKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNEVAKIIEVAPIRVYEVATFYSMFNRSKVGKYHLLVCGTTPCMVR--GSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDGHSET 662 ++R S L H ++PDNNPD+P+KFS N++ ++EI+ YP YK++AV+PLLDL Q+QHG + +S MNEVA+++E+ P+RVYEVA+FY+M+NR+ VGK+H+ C TTPC + GS I A+ +HLG+K+ E T DGLF+ E+EC+G C NAPM+ + D +Y+ED ET Sbjct: 38 SARRPSDTLMVHRNTPDNNPDIPFKFSADNEKVIEEIIKRYPPQYKKAAVMPLLDLGQRQHG-FCSISVMNEVARLLEMPPMRVYEVASFYTMYNRTPVGKFHVQACTTTPCQLGGCGSDVIVKAIKEHLGIKQGETTPDGLFTFIEVECLGACANAPMVQIND----------DYFEDLTPET 210 The following BLAST results are available for this feature:
BLAST of DR404311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404311 ID=DR404311; Name=DR404311; organism=Citrus sinensis; type=EST; length=685bpback to top |