CX070145

Overview
NameCX070145
Unique NameCX070145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7337 contig Csv1_Contig7337:105..902. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX070145 vs. ExPASy Swiss-Prot
Match: EBP_ORYSJ (Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.002e-69
Identity = 128/199 (64.32%), Postives = 157/199 (78.89%), Query Frame = -1
Query:  201 YAPNLLSQSTILAAYGLASLFVVSLIRVISGKVPK-ISKTDRWLMCWWAFTGLTHIILEGYFAFSPEFYKDKSGFYLAEVWKEYSKGDSRYAARDAGVVAVEGITAVLEGPASLLSVYAIATGKSYSYILQFAISLGQLYGTAVYFMTSYLEGDNFAASPYYYNLYYIGANASWVVIPSLIAIRCWKKICAAPQLQGQK 794
            + P  LSQ+ IL  Y   SLF++  + +ISG+  + +S TDRWLMCWWAFTGLTHII+EG F F+P F+ +++  Y  EVWKEYSKGDSRY ARD   V VEGITAVLEGPASLL+VYAIA+GKSYS+ILQF + LGQLYG  VYF+T+YL+G NF  SP+Y+  Y+IGAN+SWVVIP++IAIR WKKICAA   QG+K
Sbjct:   19 FVPLQLSQAQILVPYLATSLFLLLAVWLISGRCSRRLSDTDRWLMCWWAFTGLTHIIIEGTFVFAPNFFSNQNPSYFDEVWKEYSKGDSRYVARDPATVTVEGITAVLEGPASLLAVYAIASGKSYSHILQFTVCLGQLYGCLVYFITAYLDGFNFWTSPFYFWAYFIGANSSWVVIPTMIAIRSWKKICAA--FQGEK 215          
BLAST of CX070145 vs. ExPASy Swiss-Prot
Match: EBP_ARATH (Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Arabidopsis thaliana GN=At1g20050 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.916e-69
Identity = 126/191 (65.97%), Postives = 153/191 (80.10%), Query Frame = -1
Query:  222 YAPNLLSQSTILAAYGLASLFVVSLIRVISGKVPKISKTDRWLMCWWAFTGLTHIILEGYFAFSPEFYKDKSGFYLAEVWKEYSKGDSRYAARDAGVVAVEGITAVLEGPASLLSVYAIATGKSYSYILQFAISLGQLYGTAVYFMTSYLEGDNFAASPYYYNLYYIGANASWVVIPSLIAIRCWKKICAA 794
            Y P  +S S+I++ Y  +SL VVSL+ ++ G+  K +K D+ LMCWW FTGLTH+ILEGYF FSPEF+KD +  YLAEVWKEYSKGDSRY  RD+ VV+VEGITAV+ GPASLL++YAIA  KSYSY+LQ AIS+ QLYG  VYF+T+ LEGDNFA + +YY  YYIGAN  WV+IPSLI+ RCWKKICAA
Sbjct:   18 YVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR--KKAKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSAVVSVEGITAVIVGPASLLAIYAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFATNSFYYYSYYIGANCWWVLIPSLISFRCWKKICAA 206          
BLAST of CX070145 vs. ExPASy Swiss-Prot
Match: EBP_MOUSE (3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus GN=Ebp PE=1 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 4.259e-28
Identity = 70/208 (33.65%), Postives = 111/208 (53.37%), Query Frame = -1
Query:  186 DYAPNLLSQSTILAAYGLAS--LFVVSLIRVISGKVPKISKTDRWLMCWWAFTGLTHIILEGYFAFSPEFYKDKSGFYLAEVWKEYSKGDSRYAARDAGVVAVEGITAVLEGPASLLSVYAIATGKSYSYILQFAISLGQLYGTAVYFMTSYLEG--DNFAASPYYYNLYYIGANASWVVIPSLIAIRCWKKICAAPQLQGQKKNKVR 797
            ++ PN L  S IL      S  L V++ +      V  +    R  +CW+A     H+++EG+F+       +   F L+++WKEYSKGDSRY   D+ VV +E +TA L GP SL  V A    + + ++LQ  +S+GQ+YG  +YF+T   EG        P Y+  Y++  NA W+VIPS++ +   K + +A  +   K  K++
Sbjct:   20 NFVPNDLPTSHILVGLFSISGGLIVITWLLSSRASVVPLGAGRRLALCWFAVCTFIHLVIEGWFSLYNGILLEDQAF-LSQLWKEYSKGDSRYILSDSFVVCMETVTACLWGPLSLWVVIAFLRQQPFRFVLQLVVSMGQIYGDVLYFLTELHEGLQHGEIGHPVYFWFYFVFLNAVWLVIPSILVLDAIKHLTSAQSVLDSKVMKIK 226          
BLAST of CX070145 vs. ExPASy Swiss-Prot
Match: EBP_RAT (3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Rattus norvegicus GN=Ebp PE=2 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 2.114e-27
Identity = 67/208 (32.21%), Postives = 110/208 (52.88%), Query Frame = -1
Query:  186 DYAPNLLSQSTILAAYGLASLFVVSLIRVISGKVPKI--SKTDRWLMCWWAFTGLTHIILEGYFAFSPEFYKDKSGFYLAEVWKEYSKGDSRYAARDAGVVAVEGITAVLEGPASLLSVYAIATGKSYSYILQFAISLGQLYGTAVYFMTSYLEGDNFA--ASPYYYNLYYIGANASWVVIPSLIAIRCWKKICAAPQLQGQKKNKVR 797
            ++ PN L    IL      S  ++ +  ++S +V  +      R  +CW+A     H+++EG+F+F  E   +   F L+++WKEYSKGDSRY   D  +V +E +TA L GP SL  V A    + + ++LQ  +S+GQ+YG  +YF+T   +G        P Y+  Y++  NA W+VIP ++     K +  A  +   K  K++
Sbjct:   20 NFVPNDLPTWHILVGLFSFSGVLIVITWLLSSRVSVVPLGTGRRLALCWFAVCTFIHLVIEGWFSFYHEILLEDQAF-LSQLWKEYSKGDSRYILSDGFIVCMESVTACLWGPLSLWVVIAFLRHQPFRFVLQLVVSVGQIYGDVLYFLTELRDGFQHGELGHPLYFWFYFVIMNAIWLVIPGILVFDAIKHLTNAQSMLDNKVMKIK 226          
BLAST of CX070145 vs. ExPASy Swiss-Prot
Match: EBP_HUMAN (3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Homo sapiens GN=EBP PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 8.881e-26
Identity = 69/198 (34.85%), Postives = 106/198 (53.54%), Query Frame = -1
Query:  186 LASLFVVSLIRVI-----SGK--VPKISKTDRWLMCWWAFTGLTHIILEGYFAFSPEFYKDKSG--FYLAEVWKEYSKGDSRYAARDAGVVAVEGITAVLEGPASLLSVYAIATGKSYSYILQFAISLGQLYGTAVYFMTSYLEGDNFA--ASPYYYNLYYIGANASWVVIPSLIAIRCWKKICAAPQLQGQKKNKVR 746
            LA LF V+ + V+     SG+  V  +    R  +CW+A  G  H+++EG+F     +Y+D  G   +L+++WKEY+KGDSRY   D   V +E ITA L GP SL  V A        +ILQ  +S+GQ+YG  +YF+T + +G        P Y+  Y++  NA W+V+P ++ +   K +  A      K  K +
Sbjct:   32 LAGLFSVTGVLVVTTWLLSGRAAVVPLGTWRRLSLCWFAVCGFIHLVIEGWFVL---YYEDLLGDQAFLSQLWKEYAKGDSRYILGDNFTVCMETITACLWGPLSLWVVIAFLRQHPLRFILQLVVSVGQIYGDVLYFLTEHRDGFQHGELGHPLYFWFYFVFMNALWLVLPGVLVLDAVKHLTHAQSTLDAKATKAK 226          
BLAST of CX070145 vs. ExPASy Swiss-Prot
Match: EBP_CAVPO (3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 5.756e-25
Identity = 65/184 (35.33%), Postives = 98/184 (53.26%), Query Frame = -1
Query:  255 YAPNLLSQSTILAA-YGLASLFVVSLIRVIS-GKVPKISKTDRWLMCWWAFTGLTHIILEGYFAFSPEFYKDKSGFYLAEVWKEYSKGDSRYAARDAGVVAVEGITAVLEGPASLLSVYAIATGKSYSYILQFAISLGQLYGTAVYFMTSYLEGDNFA--ASPYYYNLYYIGANASWVVIPSLI 794
            + PN LS   I+   + +    VV++  + S   V  +    R  +CW+A     H+++EG+F    +       F L+++WKEY+KGDSRY   D  ++ +E IT VL GP SL +V A        Y+LQF ISLGQ+YG  +YF+T Y +G        P Y+  Y+   N  W+VIP ++
Sbjct:   22 FVPNDLSAWYIVTVLFTVFGALVVTMWLLSSRASVVPLGTWRRLSVCWFAVCAFVHLVIEGWFVLYQKAILGDQAF-LSQLWKEYAKGDSRYIIEDNFIICMESITVVLWGPLSLWAVIAFLRQHPSRYVLQFVISLGQIYGDLLYFLTEYRDGFQHGEMGHPIYFWFYFFFMNVLWLVIPGVL 204          
BLAST of CX070145 vs. ExPASy Swiss-Prot
Match: EBPL_MOUSE (Emopamil-binding protein-like OS=Mus musculus GN=Ebpl PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.051e-18
Identity = 51/156 (32.69%), Postives = 83/156 (53.21%), Query Frame = -1
Query:  231 SKTDRWLMCWWAFTGLTHIILEGYFAFSPEF--YKDKSGFYLAEVWKEYSKGDSRYAARDAGVVAVEGITAVLEGPASLLSVYAIATGKSYSYILQFAISLGQLYGTAVYFMTSYLEGDNF--AASPYYYNLYYIGANASWVVIPSLIAIRCWKKI 686
            S  +RW++ W  +  L H +LEG F +        D  G  +A +WKEY K D+R+   D  VV++E +T VL+G  +L+ +YAI   K Y + +Q  + + +LYG  + F   +L G      +S  Y  +Y +  N  WV+IP L+  + W ++
Sbjct:   37 SAVERWVLAWLCYDSLVHFVLEGAFVYLSIVGNVADSQGL-IASLWKEYGKADTRWLYSDPTVVSLEILTVVLDGLLALVLIYAIVKEKYYRHFVQIVLCVCELYGCWMTFFPEWLVGSPSLNTSSWLYLWVYLVFFNGLWVLIPGLLLWQSWVEL 191          
BLAST of CX070145 vs. ExPASy Swiss-Prot
Match: EBPL_HUMAN (Emopamil-binding protein-like OS=Homo sapiens GN=EBPL PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.864e-16
Identity = 51/152 (33.55%), Postives = 77/152 (50.66%), Query Frame = -1
Query:  231 DRWLMCWWAFTGLTHIILEGYFAF-SPEFYKDKSGFYLAEVWKEYSKGDSRYAARDAGVVAVEGITAVLEGPASLLSVYAIATGKSYSYILQFAISLGQLYGTAVYFMTSYL-EGDNFAASPYYYN-LYYIGANASWVVIPSLIAIRCWKKI 677
            DR  + W  +  L H  LEG F + S       S   +A +WKEY K D+R+   D  +V+VE +T  L+G  +L  +YAI   K Y + LQ  + + +LYG  + F+  +L    N   S + Y  LY    N  WV+IP L+  + W ++
Sbjct:   40 DRGALIWLCYDALVHFALEGPFVYLSLVGNVANSDGLIASLWKEYGKADARWVYFDPTIVSVEILTVALDGSLALFLIYAIVKEKYYRHFLQITLCVCELYGCWMTFLPEWLTRSPNLNTSNWLYCWLYLFFFNGVWVLIPGLLLWQSWLEL 191          
The following BLAST results are available for this feature:
BLAST of CX070145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
EBP_ORYSJ1.002e-6964.32Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-i... [more]
EBP_ARATH2.916e-6965.97Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-i... [more]
EBP_MOUSE4.259e-2833.653-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase ... [more]
EBP_RAT2.114e-2732.213-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase ... [more]
EBP_HUMAN8.881e-2634.853-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase ... [more]
EBP_CAVPO5.756e-2535.333-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase ... [more]
EBPL_MOUSE1.051e-1832.69Emopamil-binding protein-like OS=Mus musculus GN=E... [more]
EBPL_HUMAN2.864e-1633.55Emopamil-binding protein-like OS=Homo sapiens GN=E... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_15A07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15A07-B13-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070145 ID=CX070145; Name=CX070145; organism=Citrus sinensis; type=EST; length=800bp
TTTTTTTTTTTTATTTGGAAAACTCACGAAAACAAAAAGTACTTAGTTAA
TCTTAAATGTTCTTTGAAGATAACAAATCGAGTTGCATAAATTAAGTTAC
AAAATATCAAATCCACGGCACAATGAAGTTCCATAATTTGAAACACTACT
GAGATTCCGAATGAAATGTTCTAAAGTCTACCTCAGCGAACTTTATTCTT
CTTCTGCCCTTGCAGCTGGGGTGCTGCACAAATTTTCTTCCAACACCGGA
TAGCTATCAGTGAGGGTATCACAACCCAGGAGGCATTTGCTCCAATGTAG
TACAGATTGTAGTAATATGGACTAGCAGCAAAGTTATCGCCTTCCAAGTA
AGAAGTCATAAAATATACAGCAGTGCCATAAAGCTGCCCAAGGGAAATTG
CAAACTGAAGAATATAGCTGTACGATTTTCCTGTAGCTATAGCATACACC
GAAAGAAGACTAGCAGGGCCCTCCAAAACTGCAGTAATTCCTTCAACAGC
AACAACTCCTGCATCTCTTGCTGCATATCGTGAATCACCTTTGCTATATT
CCTTCCAAACTTCAGCCAAGTAAAAACCAGACTTGTCCTTGTAAAATTCT
GGAGAGAAAGCAAAATAACCCTCTAGAATGATGTGAGTAAGGCCAGTGAA
AGCCCACCAGCACATGAGCCATCTGTCCGTCTTTGATATCTTGGGTACCT
TCCCAGAGATTACCCTGATAAGGGAGACGACGAACAAAGAGGCAAGTCCA
TAAGCAGCAAGTATAGTGGACTGCGAGAGCAAGTTGGGCGCGTAATCCAC
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