CX070137

Overview
NameCX070137
Unique NameCX070137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070137 vs. ExPASy Swiss-Prot
Match: FBL93_ARATH (Putative F-box/LRR-repeat protein At4g15060 OS=Arabidopsis thaliana GN=At4g15060 PE=4 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 78/252 (30.95%), Postives = 121/252 (48.02%), Query Frame = 1
Query:  103 SNIRDKDEALKDWVSRLPDDILVNIISRLTLKEAARTSVLSSRWKYLWTYASNLNFDASKLLVNVYEETIEEERLRYMCWVNKVLESHKSLSVNEFIIVFDLDDS-HESNISHWVYTAISKRAQKFELNLFPALCWP-PA---SGIYEFSQGCYDYLKSPC-----GLSRVKSLRFLYFDTVNVTE-EILEFFINNCPNLDDLRVGRS----DKLLRLKVVGSSLQLKCLHIDHCNNLEELEISCPSLLSFK 813
            +N+ D ++   D +SRLPDD+LV ++  L  K A  TS+LS RW++LW +   L +       N      EE+RLR   ++N  L+ H++  +    + F L  S    NI  W+  A+ +  ++  +NLFP  C   PA   S +Y         LK         ++ + SL++L    V   +   L   +++CP L +L V R     D+ L + V  SSLQ   L I    + +EL I+ PSL  FK
Sbjct:   17 TNLGDYEDM--DKISRLPDDLLVKVLLFLPTKIAVSTSILSKRWEFLWMWLPKLEYH------NTNYSASEEQRLR--SFINLNLQLHRAPIIESLRLKFSLGRSIKPQNIKQWIIIAVFRCVRELSINLFPLYCIENPAKLPSSLYISKSLVILKLKDQILVDVPRMAYLPSLKYLLLKRVTYKDSNSLHQLLSSCPVLKNLVVERDEYNHDETLSITV--SSLQRLTLKISRGGSFDELVINTPSLKYFK 256          
BLAST of CX070137 vs. ExPASy Swiss-Prot
Match: FB228_ARATH (F-box protein At4g10400 OS=Arabidopsis thaliana GN=At4g10400 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15
Identity = 73/251 (29.08%), Postives = 118/251 (47.01%), Query Frame = 1
Query:  136 DWVSRLPDDILVNIISRLTLKEAARTSVLSSRWKYLWTYASNLNFDASKLLVNVYEETIEEERLRYMCWVNKVLESHKSLSVNEFIIVFDLDDSH--ESNISHWVYTAISKRAQKFEL---------NLFPALCWPPASGIYEFSQG--CYDYLKSPCGLSRVKSLRFLYFDTVNVTEE-ILEFFINNCPNLDDLRVGRS--DKLLRLKVVGSSLQLKCLHIDHCNNLEELEISCPSLLSFKYFGPENQLH 840
            D +S LPD++LV I+S +  K A  TS+LS RW++LW + + L F + +          E E  R  C++++ L  H++  +  F +V  L DSH    +I  WV  A+S+  ++ ++         N+ P+  +   S +     G    D  +  C    + SL+ L    V   ++  L+  + NCP L+DL V  S  D + +L V+  SLQ   L      +  E  I  PSLLSF+     +  H
Sbjct:    2 DRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRY--------SESEFKRLQCFLDRNLPLHRAPVIESFRLV--LSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVC----LPSLKTLELKGVRYFKQGSLQRLLCNCPVLEDLVVNLSHHDNMGKLTVIVPSLQRLSLSTP---SSREFVIDTPSLLSFQLVDRNDNSH 235          
BLAST of CX070137 vs. ExPASy Swiss-Prot
Match: FBL39_ARATH (F-box/LRR-repeat protein At2g42730 OS=Arabidopsis thaliana GN=At2g42730 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.002e-14
Identity = 66/242 (27.27%), Postives = 111/242 (45.87%), Query Frame = 1
Query:  133 KDWVSRLPDDILVNIISRLTLKEAARTSVLSSRWKYLWTYASNLNFDASKLLVNVYEETIEEERLRYMCWVNKVLESHKSLSVNEFII---VFDLDDSHESNISHWVYTAISKRAQKFELNLFPALCWPPASGIYEFSQGCYDYLKSPCGLS-------RVKSLRFLYFDTVNVT--EEILEFFINNCPNLDDLRVGRSDKLLRLKVVGSSLQLKCLHIDHCNNLEELEISCPSLLSFKYFG 822
            KD +SRLPD++L  I+S ++ KEA  TSVLS RWK ++   SNL+ D  + +    +  IE  R  YM +V+K+L++ +  S+ +  +   V     +  S I  W+   +       ++ +      PP   +  F       L+   G +        +  LR L  D+VN      ++   I+ CP L++L V    + +      SS  LK LHI        + +  P+L+ +K+ G
Sbjct:    4 KDVISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDIDDRQSVPKTKQNRIEIHR-NYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGVMDLDVFITLKGKSPPVPAMI-FKSKTLVKLRVGRGFTIKLSQDVSLPLLRTLCLDSVNFVGGHNVVGTLISRCPVLEEL-VVEERRCVDWTCSVSSPSLKRLHIRFDRKFTSISLDAPNLIYYKHSG 242          
BLAST of CX070137 vs. ExPASy Swiss-Prot
Match: FBL13_ARATH (F-box/LRR-repeat protein 13 OS=Arabidopsis thaliana GN=FBL13 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.108e-13
Identity = 66/247 (26.72%), Postives = 117/247 (47.37%), Query Frame = 1
Query:  106 NIRDKDEALKDWVSRLPDDILVNIISRLTLKEAARTSVLSSRWKYLWTYASNLNFDASKLLVNVYEETIEEERLRYMCWVNKVLESHKSLSVNEFIIVFDLDDSHESN---ISHWVYTAISKRAQKFELNLFPALCWPP--ASGIYEFSQGCYDYLK-SPCGLSRVKSLRFLYFDTVNVTEEI---------LEFFINNCPNLDDLRVGRS--DKLLRLKVVGSSLQLKCLHIDHCNN--LEELEIS 789
            ++R K     DW+S+LPD +L  ++  L  K+  +TSVLS RW+ LW +   L+ D           T  +E   ++ +V+  L+ +    + +FI+ +D DD ++ +   I  W+ T ++++ Q  ++       W     S IY     C   +    CGL+ + S  F+   ++ V + I         LE  I  CP L+ L + RS  D++  L+V   SL L+  H+   +   +E+L +S
Sbjct:    8 HVRAKGSDEVDWISKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLWKHVPGLDLD----------NTDFQEFNTFLSFVDSFLDFNSESFLQKFILKYDCDDEYDPDIFLIGRWINTIVTRKVQHIDVLDDSYGSWEVQLPSSIYT----CESLVSLKLCGLT-LASPEFVSLPSLKVMDLIITKFADDMGLETLITKCPVLESLTIERSFCDEIEVLRVRSQSL-LRFTHVADSDEGVVEDLVVS 238          
BLAST of CX070137 vs. ExPASy Swiss-Prot
Match: FBL65_ARATH (F-box/LRR-repeat protein At3g59210 OS=Arabidopsis thaliana GN=At3g59210 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.211e-13
Identity = 67/250 (26.80%), Postives = 120/250 (48.00%), Query Frame = 1
Query:  121 DEALKDWVSRLPDDILVNIISRLTLKEAARTSVLSSRWKYLWTYASNLNFDASKLLVNVYEETI--EEERLRYMCWVNKVLESHKSLSVNEFIIVFDLDDSHESNISHWVYTAISKRAQKFELNLFPALC-WPPASGIYEFSQGCYDYLK-SPCGLSRVK-------SLRFLYFDTVNVTEEILEF--FINNCPNLDDLRV-----GRSDKLLRLKVVGSSLQLKCLHIDHCNNLEELEISCPSLLSFKY 816
            D+  KD ++ LPD++L  I+S L+ KEAA TS+LS RW+YL+    NL+FD   +L +++ E    ++++  ++ +V++VL+      +N+F +    D   + ++  W+   +        L++ P+L  W P+     F+      LK  P    RVK        L+ L  D+V   E  + F   ++ CP L++L +      R D       +   L L C H     N + +    P+++ F+Y
Sbjct:    2 DDCSKDIINCLPDNLLCQILSNLSTKEAALTSLLSKRWRYLFALVPNLDFD---VLPSLHPEVAMQDQDQTSFIDFVDRVLKLRGKDHINKFSLKCG-DGIEDEDVFPWILNTLRHGVSDLSLHVSPSLVYWLPSK---VFASKTLVRLKIGPKDGPRVKLRNVCLPKLKTLNLDSVVFEEGKIGFAKLLSGCPVLEELSLLNLAWDRWDSCSVSSKILKRLTLYCAH--SSRNPKSVSFDTPNVVYFEY 242          
BLAST of CX070137 vs. ExPASy Swiss-Prot
Match: FBL64_ARATH (F-box/LRR-repeat protein At3g59200 OS=Arabidopsis thaliana GN=At3g59200 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.500e-13
Identity = 59/197 (29.95%), Postives = 100/197 (50.76%), Query Frame = 1
Query:  121 DEALKDWVSRLPDDILVNIISRLTLKEAARTSVLSSRWKYLWTYASNLNFDASKLLVNVYEETIEEERLRYMCWVNKVLESHKSLSVNEFIIVFDLDDSHESNISHWVYTAISKRAQKFELNLFPALCWPPASGIYEFSQGCYDYLKSPCG-----LSR----VKSLRFLYFDTVNVTEEILEF--FINNCPNLDDL 678
            D   +D +S LP+ ++ +I+S L  KEAA TSVLS +W+YL+ Y +NL+FD S       +  +E  R  +M +V++VL    + SVN+F +     D   + ++ W+   + +   + +L++   L +P  S I+  S+        P       L R    +  L+ LY D V+V E    F   ++ CP L++L
Sbjct:    2 DFVSRDRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKSDVELSR-SFMEFVDRVLALQGNGSVNKFSLECSNYDVDLARVTGWILNVLGRGVSELDLSI---LEYPLPSEIF-VSKTLVRLKLGPANDLTLTLDRKDVFLPKLKTLYIDCVDVQERGFGFVKLLSGCPVLEEL 193          
BLAST of CX070137 vs. ExPASy Swiss-Prot
Match: FBL32_ARATH (F-box/LRR-repeat protein At1g55660 OS=Arabidopsis thaliana GN=At1g55660 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.500e-13
Identity = 73/279 (26.16%), Postives = 126/279 (45.16%), Query Frame = 1
Query:   31 FSWSLIDISGQSSEKLSDRATMSSSNIRDKDEALKDWVSRLPDDILVNIISRLTLKEAARTSVLSSRWKYLWTYASNLNFDASKLLVNVYEETIEEERLRYMCWVNKVLESHKSLSVNEFIIVF---DLDDSHESNISHWVYTAIS-KRAQKFELNLF----------PALCWPPASGIYEF-SQGCYDYLKSPCGLSRVKSLRFLYFDTVNVTE-EILEFFINNCPNLDDLRVGRS--DKLLRLKVVGSSLQLKCLHIDHCNNLEELEISCPSLLSFK 813
            FSW L  I     +K+++    S+    +  + L D +S+LPD++LV ++S L+ K+A  TS+LS RWK LW +   L ++     V+        E      ++   L  HK+ ++    + F    +      +I  WV  A+     ++  L LF           +LC   +  I +   +   D  +  C    + SL+ L+   V  ++   L   ++NCP L+DL + R   D L +L V+  SLQ   L +    +L+ L+++ PSL   K
Sbjct:   18 FSWLLGQIPSFLFDKINESWLTSTKRNVEIVKNLMDKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNFRHYSVS--------EGQGLARFITSSLRVHKAPAIESLSLKFRYGAIGSIKPKDIYLWVSLAVHVSNVRELSLKLFNFAELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVC----LPSLKTLFLGRVTYSDANSLHRLLSNCPVLEDLVMERDKIDNLGKLSVIVKSLQRLTLKMSRPCHLDGLKMNSPSLKYLK 284          
BLAST of CX070137 vs. ExPASy Swiss-Prot
Match: FDL8_ARATH (Putative F-box/FBD/LRR-repeat protein At1g66300 OS=Arabidopsis thaliana GN=At1g66300 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12
Identity = 62/265 (23.40%), Postives = 114/265 (43.02%), Query Frame = 1
Query:   61 QSSEKLSDRATMSSSNIRDKDEALK-DWVSRLPDDILVNIISRLTLKEAARTSVLSSRWKYLWTYASNLNFDASKLLVNVYEETIEEERLRYMCWVNKVLESHKSLSVNEFIIVFDLD-----DSHESNISHWVYTAISKRAQKFELNLFPALCWPPASGIYEFSQG---CYDYLKSPCGLSRVKSLRFLYFDTVNVTEEI-LEFFINNCPNLDDLRVGRSDKLLRLKVVGSSLQLKCLHIDHCNNLEELEISCPSLLSFKYFGP 825
            +  EK      + S    DK    + DWV  LP+ ++ +++  L+ K+  +  VLS++W+YLW Y   L+ D S             E   ++ +V++ L ++    +N+F + FD D     ++  + ++ W+   + ++ Q  +L  + AL  PP   + +       C   L  P     + S++ +  D V    ++ LE  I+ C  L  L + RS+                      +N++ L +   SLLSF Y GP
Sbjct:    3 EDGEKRVRTKRLCSPESSDKKSGYEVDWVRDLPESLICHVLLNLSTKDVIKNCVLSTKWRYLWRYVPGLDLDCSDF----------TEYNTFVSFVDRFLSTNTESYLNKFKLGFDCDLVGDEETGNAQMARWINDVVKRKVQHLDLE-WGALEIPPIVYVCKSLVSLKLCGVILPIP-EFVCLPSVKVIVLDWVKFANDLALEMLISGCLVLKSLTLCRSNN---------------------DNVKVLRVRSQSLLSFNYNGP 234          
BLAST of CX070137 vs. ExPASy Swiss-Prot
Match: FDL32_ARATH (Putative F-box/FBD/LRR-repeat protein At5g22670 OS=Arabidopsis thaliana GN=At5g22670 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.656e-12
Identity = 62/243 (25.51%), Postives = 112/243 (46.09%), Query Frame = 1
Query:  133 KDWVSRLPDDILVNIISRLTLKEAARTSVLSSRWKYLWTYASNLNFDASKLLVNVYEETIEEERLRYMCWVNKVLESHKSLSVNEFIIVFDLDDSHESNISHWVYTAISKRAQKFELNLFPAL-----------CWPPAS-GIYEFSQGCYDYLKSPCGLSRVKSLRFLYFDTVNVTEEILEFFINNCPNLDDLRVGRS----DKLLRLKVVGSSLQLKCLHIDHCNNLE----ELEISCPSL 801
            +D +S LPDD+L  I+S L  K A RTSVLS RWK        L F+ S+     +    E  R+     V+  L++ +   +++  + F+      S ++ W++ A+ ++ Q  ++  +  L           C    S  ++  S   +D++  P    R+K++  +  D +   + +LE  I++CP L+DL V R      K+LR++ +     +  L  D   ++E    E+ I  P L
Sbjct:   10 QDSISLLPDDLLCRILSNLPTKVAVRTSVLSKRWKRFSLSVPLLEFNVSE-----FHGYYEFARV-----VHGFLDTSRETCIHKLKLAFEKKQHDRSYLTQWIHNAVKRKVQHLDIGRWSYLGQELIPHSLYTCETLVSLRLHNVSLPDFDHVSLP----RLKTMHLI--DNIYPNDALLENLISSCPVLEDLNVSRDVENIVKVLRVRSLSLKSLILALDGDRYGDIEDDSWEVVIDAPRL 236          
BLAST of CX070137 vs. ExPASy Swiss-Prot
Match: FB226_ARATH (F-box protein At4g09920 OS=Arabidopsis thaliana GN=At4g09920 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.942e-12
Identity = 67/241 (27.80%), Postives = 112/241 (46.47%), Query Frame = 1
Query:  136 DWVSRLPDDILVNIISRLTLKEAARTSVLSSRWKYLWTYASNLNFDASKLLVNVYEETIEEERLRYMCWVNKVLESHKSLSVNEFIIVFDLDDSH--ESNISHWVYTAISKRAQKFEL---------NLFPALCWPPASGIYEFSQG--CYDYLKSPCGLSRVKSLRFLYFDTVNVTEE-ILEFFINNCPNLDDLRV--GRSDKLLRLKVVGSSLQLKCLHIDHCNNLEELEISCPSLLSF 810
            D +  LPD++LV I+S +  K A  TS+LS RW++LW + + L F + +          E E  R  C++++ L  H++  +  F +V  L DSH    +I  WV  A+S+  ++ ++         N+ P+  +   S +     G    D  +  C    + SL+ L    V   ++  L+  + NCP L+DL V   R D +    V+  SLQ   L++    NLE   I   + L +
Sbjct:    2 DRIIGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRY--------SESEFKRLQCFLDRNLPLHRAPVIESFRLV--LSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVLLDVPRMVC----LPSLKTLELKGVRYFKQGSLQRLLCNCPVLEDLFVLLLRCDDIGMFIVIVPSLQRLSLYLSPRCNLEGFVIVLDTPLEY 228          
The following BLAST results are available for this feature:
BLAST of CX070137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
FBL93_ARATH1.652e-1730.95Putative F-box/LRR-repeat protein At4g15060 OS=Ara... [more]
FB228_ARATH7.674e-1529.08F-box protein At4g10400 OS=Arabidopsis thaliana GN... [more]
FBL39_ARATH1.002e-1427.27F-box/LRR-repeat protein At2g42730 OS=Arabidopsis ... [more]
FBL13_ARATH1.108e-1326.72F-box/LRR-repeat protein 13 OS=Arabidopsis thalian... [more]
FBL65_ARATH4.211e-1326.80F-box/LRR-repeat protein At3g59210 OS=Arabidopsis ... [more]
FBL64_ARATH5.500e-1329.95F-box/LRR-repeat protein At3g59200 OS=Arabidopsis ... [more]
FBL32_ARATH5.500e-1326.16F-box/LRR-repeat protein At1g55660 OS=Arabidopsis ... [more]
FDL8_ARATH4.656e-1223.40Putative F-box/FBD/LRR-repeat protein At1g66300 OS... [more]
FDL32_ARATH4.656e-1225.51Putative F-box/FBD/LRR-repeat protein At5g22670 OS... [more]
FB226_ARATH7.942e-1227.80F-box protein At4g09920 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_15A03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-15A03-B5-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070137 ID=CX070137; Name=CX070137; organism=Citrus sinensis; type=EST; length=844bp
GAAACAGTAAAGAATCACAACGAAATCGATTTCAGCTGGAGCTTGATTGA
TATATCTGGGCAAAGTTCAGAGAAATTGAGCGACAGAGCAACGATGAGCT
CTTCCAATATCCGGGACAAGGATGAGGCTTTGAAGGATTGGGTGAGCCGC
CTCCCAGATGATATTCTTGTTAATATTATATCCCGGTTAACGCTTAAGGA
AGCTGCAAGGACCAGTGTTCTTTCGAGTAGATGGAAGTATTTGTGGACTT
ATGCCTCTAATCTTAACTTTGATGCTTCAAAGTTGCTCGTGAATGTTTAT
GAAGAGACTATAGAAGAAGAAAGGTTGAGGTACATGTGCTGGGTGAATAA
AGTCTTAGAATCGCATAAAAGTTTAAGCGTTAATGAGTTCATAATAGTTT
TTGATTTGGATGATTCTCATGAAAGCAACATTAGTCATTGGGTTTACACA
GCAATATCAAAGAGAGCTCAAAAGTTTGAGTTGAACTTGTTTCCTGCTCT
TTGTTGGCCACCCGCTTCTGGGATATATGAATTTTCACAAGGCTGTTATG
ACTATCTCAAAAGTCCCTGTGGTTTATCTAGAGTTAAGTCTCTAAGATTT
CTCTATTTTGATACAGTGAATGTTACAGAAGAGATTCTTGAGTTCTTTAT
AAACAATTGTCCAAATCTTGATGACTTACGGGTTGGACGGTCTGATAAGC
TATTAAGATTAAAGGTTGTTGGCTCATCACTTCAGTTGAAGTGTCTACAC
ATCGACCATTGCAACAACCTAGAGGAACTTGAAATTTCTTGCCCAAGTCT
TTTGTCATTCAAATATTTTGGACCAGAAAATCAGTTGCATGTTA
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