CX070121

Overview
NameCX070121
Unique NameCX070121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3510 contig Csv1_Contig3510:525..1310. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA1_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Urochloa panicoides GN=PCK1 PE=1 SV=1)

HSP 1 Score: 419.468 bits (1077), Expect = 1.064e-116
Identity = 198/225 (88.00%), Postives = 211/225 (93.78%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 675
            DKS+TENTRAAYPIE+IPNAKIPCVGPHPKNVILLACDA+GVLPPVSKLNLAQTMYHFISGYTA+VAGTEDG+KEPTATFSACFGAAFIM HPTKYAAMLAEKMQK+G TGWLVNTGWSGG YG G+RIKLPYTRKIIDAIHSG LL ANYKKT+VFG+EIPTE+ GVPSEILDP NTW DK AYKETLLKLAGLFK NFE+F +YKIG DN LTE+ILAAGPNF
Sbjct:  400 DKSITENTRAAYPIEFIPNAKIPCVGPHPKNVILLACDAYGVLPPVSKLNLAQTMYHFISGYTAIVAGTEDGVKEPTATFSACFGAAFIMYHPTKYAAMLAEKMQKYGRTGWLVNTGWSGGRYGVGNRIKLPYTRKIIDAIHSGELLTANYKKTEVFGLEIPTEINGVPSEILDPVNTWTDKAAYKETLLKLAGLFKNNFEVFASYKIGDDNSLTEQILAAGPNF 624          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA2_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Urochloa panicoides GN=PCK2 PE=2 SV=1)

HSP 1 Score: 412.92 bits (1060), Expect = 9.955e-115
Identity = 195/225 (86.67%), Postives = 210/225 (93.33%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 675
            DKS+TENTRAAYPIE+IPNAKIPCVGPHPKNVILLACDA+GVLPPVSKLNLAQTMYHFISGYTA+VAGTEDG+KEPTATFSACFGAAFIM HPTKYAAMLAEKMQK+GATGWLVNTGWSGG YG G+RIKLPYTRKIIDAIHSG LLNA+YKKT+VFG+EIPT + GVPSEIL P NTW DK AYKETLLKLAGLFK NFE+F +YKIG +N LTE+ILAA PNF
Sbjct:  402 DKSITENTRAAYPIEFIPNAKIPCVGPHPKNVILLACDAYGVLPPVSKLNLAQTMYHFISGYTAIVAGTEDGVKEPTATFSACFGAAFIMYHPTKYAAMLAEKMQKYGATGWLVNTGWSGGRYGVGNRIKLPYTRKIIDAIHSGELLNASYKKTEVFGLEIPTAINGVPSEILGPVNTWTDKAAYKETLLKLAGLFKNNFEVFASYKIGNNNSLTEQILAAAPNF 626          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_ARATH (Phosphoenolpyruvate carboxykinase [ATP] OS=Arabidopsis thaliana GN=PCKA PE=1 SV=1)

HSP 1 Score: 411.764 bits (1057), Expect = 2.218e-114
Identity = 196/225 (87.11%), Postives = 212/225 (94.22%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 675
            DKSVTENTRAAYPIE+IPNAKIPCVGPHP NVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKM+  GATGWLVNTGWSGGSYG G+RIKL YTRKIIDAIHSGSLL ANYKKT++FG EIPTE+EG+PSEILDP N+W+DK+A+K+TL+KL GLFK+NFE+F N+KIG D KLTEEILAAGP F
Sbjct:  447 DKSVTENTRAAYPIEFIPNAKIPCVGPHPTNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMKSQGATGWLVNTGWSGGSYGVGNRIKLAYTRKIIDAIHSGSLLKANYKKTEIFGFEIPTEIEGIPSEILDPVNSWSDKKAHKDTLVKLGGLFKKNFEVFANHKIGVDGKLTEEILAAGPIF 671          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_MAIZE (Phosphoenolpyruvate carboxykinase [ATP] OS=Zea mays PE=2 SV=1)

HSP 1 Score: 402.519 bits (1033), Expect = 1.346e-111
Identity = 194/225 (86.22%), Postives = 205/225 (91.11%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 675
            D SVTENTRAAYPIEYIP AKIPCVGPHPKNVILLACDAFGVLPPVSKL LAQTMYHFISGYTALVAGTEDGIKEP ATFSACFGAAFIMLHPTKYAAMLAEKMQK+GATGWLVNTGWSGG YG G RI+LPYTRKIIDAIHSG LL ANY+KT+VFG+EIPTE+ GVPSEILDP  TW DK AYKE LL+L GLFK NFE+F +YKIG D+ LT+EILAAGPNF
Sbjct:  442 DYSVTENTRAAYPIEYIPIAKIPCVGPHPKNVILLACDAFGVLPPVSKLILAQTMYHFISGYTALVAGTEDGIKEPQATFSACFGAAFIMLHPTKYAAMLAEKMQKYGATGWLVNTGWSGGRYGVGKRIRLPYTRKIIDAIHSGELLTANYQKTEVFGLEIPTEINGVPSEILDPIYTWTDKAAYKENLLRLGGLFKNNFEVFASYKIGDDSSLTDEILAAGPNF 666          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_CUCSA (Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis sativus GN=PCK PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.903e-106
Identity = 183/223 (82.06%), Postives = 202/223 (90.58%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            +KSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKL+L QTMYHFISGYTALVAGTE+G+KEP ATFSACFGAAFIMLHP++YAAMLAEKM+KHGATGWLVNTGWSGGSYG G+RIKL YTRKIIDAIHSG+LL ANY KT VFG+EIP  +EGVPS ILDP NTW+DK  Y ETLLKL GLFK+N+E    Y++ +D++L EEILAAGP
Sbjct:  446 EKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLSLPQTMYHFISGYTALVAGTEEGVKEPQATFSACFGAAFIMLHPSRYAAMLAEKMKKHGATGWLVNTGWSGGSYGSGNRIKLAYTRKIIDAIHSGALLEANYSKTRVFGLEIPDAIEGVPSHILDPINTWSDKDGYHETLLKLGGLFKKNYEGIHTYQVERDSELAEEILAAGP 668          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_DICDI (Phosphoenolpyruvate carboxykinase [ATP] OS=Dictyostelium discoideum GN=pckA PE=1 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.554e-75
Identity = 136/223 (60.99%), Postives = 163/223 (73.09%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            D S+TENTR AYP+E+IPNAK P +  HPKN+I+L CDAFG+LPPVS+L+  Q MYHFI GYTA VAGTE G+ EPTATFS+C+G  FI+ HPTKYA MLA ++ KH A  WL+NTGW+GGS+G GSRIKL YTR IIDAIHSG L      K DVFG ++P    GVPSEIL P N WADK+ Y  T+ KLA LF  NF+ F        +K + E++AAGP
Sbjct:  343 DVSITENTRCAYPLEHIPNAKFPAIAGHPKNIIMLTCDAFGILPPVSRLDANQVMYHFIQGYTAKVAGTEVGVTEPTATFSSCYGEPFIVWHPTKYAEMLASQLHKHSARAWLINTGWTGGSHGVGSRIKLAYTRAIIDAIHSGELEKIPTTKMDVFGFQVPNSCPGVPSEILMPINGWADKEKYVSTMHKLAKLFIENFKKF-------QDKASPELVAAGP 558          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_CANGA (Phosphoenolpyruvate carboxykinase [ATP] OS=Candida glabrata GN=PCK1 PE=3 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.152e-70
Identity = 128/226 (56.64%), Postives = 162/226 (71.68%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGP-HPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSY-GCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQA-YKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            D S+TENTR AYPI++IP+AKIPC+ P HPKN+ILL CDA GVLPPVSKL   Q MYHFISGYT+ +AGTE G+ EP  TFS+CFG  F+ LHP +YA MLAEKM +H A  WL+NTGW+G SY   G R  L YTR I+DAIH GSL  A ++   +F +++P  VEGVPSE+L+P   W++ +A Y+  + KLAGLF  NF+ +        +K T ++LAAGP
Sbjct:  324 DSSITENTRCAYPIDFIPSAKIPCLAPAHPKNIILLTCDASGVLPPVSKLTPEQVMYHFISGYTSKMAGTEQGVTEPEPTFSSCFGQPFLSLHPMRYATMLAEKMHEHSANAWLINTGWTGSSYVSGGKRCALKYTRAILDAIHDGSLAKAEFESLPIFNLQVPKAVEGVPSELLNPARNWSEGEAKYQSAVSKLAGLFVENFKTY-------QDKATSDVLAAGP 542          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_NEUCR (Phosphoenolpyruvate carboxykinase [ATP] OS=Neurospora crassa GN=pck-1 PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.138e-68
Identity = 125/226 (55.31%), Postives = 161/226 (71.24%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGP-HPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYG-CGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTW-ADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            D ++TENTR AYPIEYIPNAKIPC+ P HPKN+ILL CDA GVLPP+SKL+ AQTM+HFISGYT+ +AGTEDGI EP ATFS+CF   F+ LHP +YA MLAEK++ H A  WL+NTGW G  +   G R  L YTR I+DAIHSG L N  Y+  +VF +++P    GVPSE+L+P+  W A   ++   + KL GLF  NF+ +       +++ TE+++ AGP
Sbjct:  341 DATLTENTRCAYPIEYIPNAKIPCLSPNHPKNIILLTCDARGVLPPISKLDSAQTMFHFISGYTSKMAGTEDGILEPQATFSSCFAQPFLALHPMRYAKMLAEKIENHNANAWLLNTGWVGAGFAQGGKRCPLKYTRAILDAIHSGELANVEYENYEVFNLQVPKSCPGVPSELLNPKTAWTAGANSFDTEVKKLGGLFLENFKKY-------ESEATEDVIKAGP 559          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_ASHGO (Phosphoenolpyruvate carboxykinase [ATP] OS=Ashbya gossypii GN=PCK1 PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.557e-67
Identity = 124/226 (54.87%), Postives = 157/226 (69.47%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGP-HPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGC-GSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQA-YKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 669
            D S+TENTR AYPIEYIP+A+IPC+   HP N++LL CDA GVLPPVS+L   Q MYHFISGYT+ +AGTE G+ EP ATFS+CFG  F+ LHP KYA MLAEKM +H A+ WL+NTGW+G SY   G R  L YTR I+D+IH G+L  A Y+   VFG+ IP  VEGVP+E+L+P   W + +  Y   +  LA  F  NF+I+        ++ TEE++ AGP
Sbjct:  321 DSSITENTRCAYPIEYIPSAQIPCLSENHPSNIVLLTCDASGVLPPVSRLTPEQVMYHFISGYTSKMAGTEQGVTEPEATFSSCFGQPFLALHPMKYATMLAEKMSQHNASAWLINTGWTGSSYTAGGKRCPLKYTRAILDSIHDGTLAQAEYETLPVFGLSIPKAVEGVPAELLNPAKNWVEGEGKYASAVSALASKFTENFKIY-------QDQATEEVVRAGP 539          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_YEAST (Phosphoenolpyruvate carboxykinase [ATP] OS=Saccharomyces cerevisiae GN=PCK1 PE=1 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 2.034e-67
Identity = 123/228 (53.95%), Postives = 161/228 (70.61%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGP-HPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSY-GCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQA-YKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 675
            D S+TENTR AYPI+YIP+AKIPC+   HPKN+ILL CDA GVLPPVSKL   Q MYHFISGYT+ +AGTE G+ EP  TFS+CFG  F+ LHP +YA MLA KM +H A  +L+NTGW+G SY   G R  L YTR I+D+IH GSL N  Y+   +F +++PT+V GVP+E+L+P   W+  ++ Y+  +  LA LF +NF+I+        ++ T ++LAAGP F
Sbjct:  328 DSSITENTRCAYPIDYIPSAKIPCLADSHPKNIILLTCDASGVLPPVSKLTPEQVMYHFISGYTSKMAGTEQGVTEPEPTFSSCFGQPFLALHPIRYATMLATKMSQHKANAYLINTGWTGSSYVSGGKRCPLKYTRAILDSIHDGSLANETYETLPIFNLQVPTKVNGVPAELLNPAKNWSQGESKYRGAVTNLANLFVQNFKIY-------QDRATPDVLAAGPQF 548          
The following BLAST results are available for this feature:
BLAST of CX070121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA1_UROPA1.064e-11688.00Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Uroch... [more]
PCKA2_UROPA9.955e-11586.67Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Uroch... [more]
PCKA_ARATH2.218e-11487.11Phosphoenolpyruvate carboxykinase [ATP] OS=Arabido... [more]
PCKA_MAIZE1.346e-11186.22Phosphoenolpyruvate carboxykinase [ATP] OS=Zea may... [more]
PCKA_CUCSA2.903e-10682.06Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis... [more]
PCKA_DICDI1.554e-7560.99Phosphoenolpyruvate carboxykinase [ATP] OS=Dictyos... [more]
PCKA_CANGA1.152e-7056.64Phosphoenolpyruvate carboxykinase [ATP] OS=Candida... [more]
PCKA_NEUCR3.138e-6855.31Phosphoenolpyruvate carboxykinase [ATP] OS=Neurosp... [more]
PCKA_ASHGO1.557e-6754.87Phosphoenolpyruvate carboxykinase [ATP] OS=Ashbya ... [more]
PCKA_YEAST2.034e-6753.95Phosphoenolpyruvate carboxykinase [ATP] OS=Sacchar... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_14H06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14H06-O12-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070121 ID=CX070121; Name=CX070121; organism=Citrus sinensis; type=EST; length=786bp
GACAAATCTGTCACAGAGAACACTCGTGCTGCCTACCCCATTGAGTATAT
CCCCAATGCAAAGATACCATGCGTTGGTCCTCATCCCAAGAATGTCATCC
TTTTGGCATGTGATGCTTTTGGTGTACTCCCACCAGTGAGCAAGCTGAAC
CTGGCACAAACAATGTACCATTTCATCAGTGGCTACACTGCTTTGGTAGC
TGGAACAGAGGATGGTATTAAGGAGCCAACGGCAACATTTTCAGCTTGCT
TTGGTGCAGCATTTATCATGCTGCATCCTACCAAGTATGCAGCAATGCTG
GCTGAGAAGATGCAGAAGCATGGTGCTACAGGATGGCTCGTCAACACTGG
ATGGTCAGGTGGAAGCTATGGTTGTGGCAGCCGCATCAAGTTACCGTACA
CTCGAAAAATCATTGATGCGATACACTCTGGCAGCCTGTTGAATGCAAAT
TACAAGAAAACTGATGTATTTGGGGTGGAAATCCCCACTGAAGTCGAGGG
AGTGCCTTCAGAAATCCTGGATCCAGAGAACACTTGGGCAGACAAGCAGG
CTTACAAGGAGACACTGCTGAAGCTGGCTGGTCTTTTCAAGAGGAACTTT
GAAATATTCACAAACTACAAGATTGGCAAGGACAACAAGCTCACTGAAGA
GATCCTTGCAGCTGGTCCAAATTTCTAATTTAGACCGAGTGAAGAACAAG
CAAAGAACGTGAGTGTGGTTTGGGAAATATGATGGAAATAAAGCGTAATA
TAGTCATATTCGACATGTGTGGTTCGATTCATATGT
back to top