CX070120

Overview
NameCX070120
Unique NameCX070120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3510 contig Csv1_Contig3510:548..1370. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA1_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Urochloa panicoides GN=PCK1 PE=1 SV=1)

HSP 1 Score: 404.445 bits (1038), Expect = 3.830e-112
Identity = 191/217 (88.02%), Postives = 203/217 (93.55%), Query Frame = -2
Query:  172 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 822
            RAAYPIE+IPNAKIPCVGPHPKNVILLACDA+GVLPPVSKLNLAQTMYHFISGYTA+VAGTEDG+KEPTATFSACFGAAFIM HPTKYAAMLAEKMQK+G TGWLVNTGWSGG YG G+RIKLPYTRKIIDAIHSG LL ANYKKT+VFG+EIPTE+ GVPSEILDP NTW DK AYKETLLKLAGLFK NFE+F +YKIG DN LTE+ILAAGPNF
Sbjct:  408 RAAYPIEFIPNAKIPCVGPHPKNVILLACDAYGVLPPVSKLNLAQTMYHFISGYTAIVAGTEDGVKEPTATFSACFGAAFIMYHPTKYAAMLAEKMQKYGRTGWLVNTGWSGGRYGVGNRIKLPYTRKIIDAIHSGELLTANYKKTEVFGLEIPTEINGVPSEILDPVNTWTDKAAYKETLLKLAGLFKNNFEVFASYKIGDDNSLTEQILAAGPNF 624          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA2_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Urochloa panicoides GN=PCK2 PE=2 SV=1)

HSP 1 Score: 397.897 bits (1021), Expect = 3.585e-110
Identity = 188/217 (86.64%), Postives = 202/217 (93.09%), Query Frame = -2
Query:  172 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 822
            RAAYPIE+IPNAKIPCVGPHPKNVILLACDA+GVLPPVSKLNLAQTMYHFISGYTA+VAGTEDG+KEPTATFSACFGAAFIM HPTKYAAMLAEKMQK+GATGWLVNTGWSGG YG G+RIKLPYTRKIIDAIHSG LLNA+YKKT+VFG+EIPT + GVPSEIL P NTW DK AYKETLLKLAGLFK NFE+F +YKIG +N LTE+ILAA PNF
Sbjct:  410 RAAYPIEFIPNAKIPCVGPHPKNVILLACDAYGVLPPVSKLNLAQTMYHFISGYTAIVAGTEDGVKEPTATFSACFGAAFIMYHPTKYAAMLAEKMQKYGATGWLVNTGWSGGRYGVGNRIKLPYTRKIIDAIHSGELLNASYKKTEVFGLEIPTAINGVPSEILGPVNTWTDKAAYKETLLKLAGLFKNNFEVFASYKIGNNNSLTEQILAAAPNF 626          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_ARATH (Phosphoenolpyruvate carboxykinase [ATP] OS=Arabidopsis thaliana GN=PCKA PE=1 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 1.043e-109
Identity = 188/217 (86.64%), Postives = 204/217 (94.01%), Query Frame = -2
Query:  172 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 822
            RAAYPIE+IPNAKIPCVGPHP NVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKM+  GATGWLVNTGWSGGSYG G+RIKL YTRKIIDAIHSGSLL ANYKKT++FG EIPTE+EG+PSEILDP N+W+DK+A+K+TL+KL GLFK+NFE+F N+KIG D KLTEEILAAGP F
Sbjct:  455 RAAYPIEFIPNAKIPCVGPHPTNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMKSQGATGWLVNTGWSGGSYGVGNRIKLAYTRKIIDAIHSGSLLKANYKKTEIFGFEIPTEIEGIPSEILDPVNSWSDKKAHKDTLVKLGGLFKKNFEVFANHKIGVDGKLTEEILAAGPIF 671          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_MAIZE (Phosphoenolpyruvate carboxykinase [ATP] OS=Zea mays PE=2 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 9.762e-108
Identity = 187/217 (86.18%), Postives = 198/217 (91.24%), Query Frame = -2
Query:  172 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 822
            RAAYPIEYIP AKIPCVGPHPKNVILLACDAFGVLPPVSKL LAQTMYHFISGYTALVAGTEDGIKEP ATFSACFGAAFIMLHPTKYAAMLAEKMQK+GATGWLVNTGWSGG YG G RI+LPYTRKIIDAIHSG LL ANY+KT+VFG+EIPTE+ GVPSEILDP  TW DK AYKE LL+L GLFK NFE+F +YKIG D+ LT+EILAAGPNF
Sbjct:  450 RAAYPIEYIPIAKIPCVGPHPKNVILLACDAFGVLPPVSKLILAQTMYHFISGYTALVAGTEDGIKEPQATFSACFGAAFIMLHPTKYAAMLAEKMQKYGATGWLVNTGWSGGRYGVGKRIRLPYTRKIIDAIHSGELLTANYQKTEVFGLEIPTEINGVPSEILDPIYTWTDKAAYKENLLRLGGLFKNNFEVFASYKIGDDSSLTDEILAAGPNF 666          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_CUCSA (Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis sativus GN=PCK PE=2 SV=1)

HSP 1 Score: 370.933 bits (951), Expect = 4.693e-102
Identity = 176/215 (81.86%), Postives = 194/215 (90.23%), Query Frame = -2
Query:  178 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 822
            RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKL+L QTMYHFISGYTALVAGTE+G+KEP ATFSACFGAAFIMLHP++YAAMLAEKM+KHGATGWLVNTGWSGGSYG G+RIKL YTRKIIDAIHSG+LL ANY KT VFG+EIP  +EGVPS ILDP NTW+DK  Y ETLLKL GLFK+N+E    Y++ +D++L EEILAAGP
Sbjct:  454 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLSLPQTMYHFISGYTALVAGTEEGVKEPQATFSACFGAAFIMLHPSRYAAMLAEKMKKHGATGWLVNTGWSGGSYGSGNRIKLAYTRKIIDAIHSGALLEANYSKTRVFGLEIPDAIEGVPSHILDPINTWSDKDGYHETLLKLGGLFKKNYEGIHTYQVERDSELAEEILAAGP 668          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_DICDI (Phosphoenolpyruvate carboxykinase [ATP] OS=Dictyostelium discoideum GN=pckA PE=1 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 8.632e-72
Identity = 130/215 (60.47%), Postives = 156/215 (72.56%), Query Frame = -2
Query:  178 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 822
            R AYP+E+IPNAK P +  HPKN+I+L CDAFG+LPPVS+L+  Q MYHFI GYTA VAGTE G+ EPTATFS+C+G  FI+ HPTKYA MLA ++ KH A  WL+NTGW+GGS+G GSRIKL YTR IIDAIHSG L      K DVFG ++P    GVPSEIL P N WADK+ Y  T+ KLA LF  NF+ F        +K + E++AAGP
Sbjct:  351 RCAYPLEHIPNAKFPAIAGHPKNIIMLTCDAFGILPPVSRLDANQVMYHFIQGYTAKVAGTEVGVTEPTATFSSCYGEPFIVWHPTKYAEMLASQLHKHSARAWLINTGWTGGSHGVGSRIKLAYTRAIIDAIHSGELEKIPTTKMDVFGFQVPNSCPGVPSEILMPINGWADKEKYVSTMHKLAKLFIENFKKF-------QDKASPELVAAGP 558          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_CANGA (Phosphoenolpyruvate carboxykinase [ATP] OS=Candida glabrata GN=PCK1 PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.092e-66
Identity = 122/218 (55.96%), Postives = 155/218 (71.10%), Query Frame = -2
Query:  178 RAAYPIEYIPNAKIPCVGP-HPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSY-GCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQA-YKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 822
            R AYPI++IP+AKIPC+ P HPKN+ILL CDA GVLPPVSKL   Q MYHFISGYT+ +AGTE G+ EP  TFS+CFG  F+ LHP +YA MLAEKM +H A  WL+NTGW+G SY   G R  L YTR I+DAIH GSL  A ++   +F +++P  VEGVPSE+L+P   W++ +A Y+  + KLAGLF  NF+ +        +K T ++LAAGP
Sbjct:  332 RCAYPIDFIPSAKIPCLAPAHPKNIILLTCDASGVLPPVSKLTPEQVMYHFISGYTSKMAGTEQGVTEPEPTFSSCFGQPFLSLHPMRYATMLAEKMHEHSANAWLINTGWTGSSYVSGGKRCALKYTRAILDAIHDGSLAKAEFESLPIFNLQVPKAVEGVPSELLNPARNWSEGEAKYQSAVSKLAGLFVENFKTY-------QDKATSDVLAAGP 542          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_NEUCR (Phosphoenolpyruvate carboxykinase [ATP] OS=Neurospora crassa GN=pck-1 PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.991e-65
Identity = 120/218 (55.05%), Postives = 154/218 (70.64%), Query Frame = -2
Query:  178 RAAYPIEYIPNAKIPCVGP-HPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYG-CGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTW-ADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 822
            R AYPIEYIPNAKIPC+ P HPKN+ILL CDA GVLPP+SKL+ AQTM+HFISGYT+ +AGTEDGI EP ATFS+CF   F+ LHP +YA MLAEK++ H A  WL+NTGW G  +   G R  L YTR I+DAIHSG L N  Y+  +VF +++P    GVPSE+L+P+  W A   ++   + KL GLF  NF+ +       +++ TE+++ AGP
Sbjct:  349 RCAYPIEYIPNAKIPCLSPNHPKNIILLTCDARGVLPPISKLDSAQTMFHFISGYTSKMAGTEDGILEPQATFSSCFAQPFLALHPMRYAKMLAEKIENHNANAWLLNTGWVGAGFAQGGKRCPLKYTRAILDAIHSGELANVEYENYEVFNLQVPKSCPGVPSELLNPKTAWTAGANSFDTEVKKLGGLFLENFKKY-------ESEATEDVIKAGP 559          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_ASHGO (Phosphoenolpyruvate carboxykinase [ATP] OS=Ashbya gossypii GN=PCK1 PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.476e-63
Identity = 118/218 (54.13%), Postives = 150/218 (68.81%), Query Frame = -2
Query:  178 RAAYPIEYIPNAKIPCVGP-HPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGC-GSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQA-YKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 822
            R AYPIEYIP+A+IPC+   HP N++LL CDA GVLPPVS+L   Q MYHFISGYT+ +AGTE G+ EP ATFS+CFG  F+ LHP KYA MLAEKM +H A+ WL+NTGW+G SY   G R  L YTR I+D+IH G+L  A Y+   VFG+ IP  VEGVP+E+L+P   W + +  Y   +  LA  F  NF+I+        ++ TEE++ AGP
Sbjct:  329 RCAYPIEYIPSAQIPCLSENHPSNIVLLTCDASGVLPPVSRLTPEQVMYHFISGYTSKMAGTEQGVTEPEATFSSCFGQPFLALHPMKYATMLAEKMSQHNASAWLINTGWTGSSYTAGGKRCPLKYTRAILDSIHDGTLAQAEYETLPVFGLSIPKAVEGVPAELLNPAKNWVEGEGKYASAVSALASKFTENFKIY-------QDQATEEVVRAGP 539          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_YEAST (Phosphoenolpyruvate carboxykinase [ATP] OS=Saccharomyces cerevisiae GN=PCK1 PE=1 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 1.927e-63
Identity = 117/220 (53.18%), Postives = 154/220 (70.00%), Query Frame = -2
Query:  172 RAAYPIEYIPNAKIPCVGP-HPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSY-GCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQA-YKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 822
            R AYPI+YIP+AKIPC+   HPKN+ILL CDA GVLPPVSKL   Q MYHFISGYT+ +AGTE G+ EP  TFS+CFG  F+ LHP +YA MLA KM +H A  +L+NTGW+G SY   G R  L YTR I+D+IH GSL N  Y+   +F +++PT+V GVP+E+L+P   W+  ++ Y+  +  LA LF +NF+I+        ++ T ++LAAGP F
Sbjct:  336 RCAYPIDYIPSAKIPCLADSHPKNIILLTCDASGVLPPVSKLTPEQVMYHFISGYTSKMAGTEQGVTEPEPTFSSCFGQPFLALHPIRYATMLATKMSQHKANAYLINTGWTGSSYVSGGKRCPLKYTRAILDSIHDGSLANETYETLPIFNLQVPTKVNGVPAELLNPAKNWSQGESKYRGAVTNLANLFVQNFKIY-------QDRATPDVLAAGPQF 548          
The following BLAST results are available for this feature:
BLAST of CX070120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA1_UROPA3.830e-11288.02Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Uroch... [more]
PCKA2_UROPA3.585e-11086.64Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Uroch... [more]
PCKA_ARATH1.043e-10986.64Phosphoenolpyruvate carboxykinase [ATP] OS=Arabido... [more]
PCKA_MAIZE9.762e-10886.18Phosphoenolpyruvate carboxykinase [ATP] OS=Zea may... [more]
PCKA_CUCSA4.693e-10281.86Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis... [more]
PCKA_DICDI8.632e-7260.47Phosphoenolpyruvate carboxykinase [ATP] OS=Dictyos... [more]
PCKA_CANGA1.092e-6655.96Phosphoenolpyruvate carboxykinase [ATP] OS=Candida... [more]
PCKA_NEUCR5.991e-6555.05Phosphoenolpyruvate carboxykinase [ATP] OS=Neurosp... [more]
PCKA_ASHGO1.476e-6354.13Phosphoenolpyruvate carboxykinase [ATP] OS=Ashbya ... [more]
PCKA_YEAST1.927e-6353.18Phosphoenolpyruvate carboxykinase [ATP] OS=Sacchar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14H06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14H06-O12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070120 ID=CX070120; Name=CX070120; organism=Citrus sinensis; type=EST; length=823bp
TTTTTTTTTTTTTTTTTGACTCAAATATCGGATTACTTAATTAATTCAGA
GAACAAGTTTACATATGAATCGAACCACACATGTCGAATATGACTATATT
ACGCTTTATTTCCATCATATTTCCCAAACCACACTCACGTTCTTTGCTTG
TTCTTCACTCGGTCTAAATTAGAAATTTGGACCAGCTGCAAGGATCTCTT
CAGTGAGCTTGTTGTCCTTGCCAATCTTGTAGTTTGTGAATATTTCAAAG
TTCCTCTTGAAAAGACCAGCCAGCTTCAGCAGTGTCTCCTTGTAAGCCTG
CTTGTCTGCCCAAGTGTTCTCTGGATCCAGGATTTCTGAAGGCACTCCCT
CGACTTCAGTGGGGATTTCCACCCCAAATACATCAGTTTTCTTGTAATTT
GCATTCAACAGGCTGCCAGAGTGTATCGCATCAATGATTTTTCGAGTGTA
CGGTAACTTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCAG
TGTTGACGAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAGC
ATTGCTGCATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGCA
AGCTGAAAATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCTA
CCAAAGCAGTGTAGCCACTGATGAAATGGTACATTGTTTGTGCCAGGTTC
AGCTTGCTCACTGGTGGGAGTACACCAAAAGCATCACATGCCAAAAGGAT
GACATTCTTGGGATGAGGACCAACGCATGGTATCTTTGCATTGGGGATAT
ACTCAATGGGGTAGGCAGCACGA
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