CX070115

Overview
NameCX070115
Unique NameCX070115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070115 vs. ExPASy Swiss-Prot
Match: THIJ_SALTY (Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=3 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.453e-29
Identity = 79/181 (43.65%), Postives = 108/181 (59.67%), Query Frame = 1
Query:   88 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASV--EDKLEILAFRQVKLVADVLIDEAAKLSYDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPVMCNKLSDQSEIENRVVVDG--NLITSRGPGTSMEFALAIVEKFFGRNKALELA 618
            S Q LV +A GSEE EAV  ID+L R   +V  ASV  +  L I+  R VKL+AD  + E A   YD+IVLPGG+ GA+ F  S  LV  +++   S R   AICA+ A VL PH +      T FP + +K+  +  ++ RVV D    L+TS+GPGT+++F L I++   GR KA E+A
Sbjct:    2 SAQALVCLAPGSEETEAVTTIDLLVRGGIHVTTASVASDGNLTIVCSRGVKLLADAPLVEVADGDYDIIVLPGGIKGAECFRDSPLLVETVKQFHRSGRIVAAICAAAATVLVPHDIFPIGNMTGFPALKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLAGREKAHEVA 182          
BLAST of CX070115 vs. ExPASy Swiss-Prot
Match: THIJ_ECOLI (Protein thiJ OS=Escherichia coli (strain K12) GN=thiJ PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.453e-29
Identity = 79/181 (43.65%), Postives = 106/181 (58.56%), Query Frame = 1
Query:   88 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASV--EDKLEILAFRQVKLVADVLIDEAAKLSYDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPVMCNKLSDQSEIENRVVVDG--NLITSRGPGTSMEFALAIVEKFFGRNKALELA 618
            S   LV +A GSEE EAV  ID+L R    V  ASV  +  L I   R VKL+AD  + E A   YD+IVLPGG+ GA+ F  S  LV  +++   S R   AICA+PA VL PH +      T FP + +K+  +  ++ RVV D    L+TS+GPGT+++F L I++   GR KA E+A
Sbjct:    2 SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVA 182          
BLAST of CX070115 vs. ExPASy Swiss-Prot
Match: PARK7_CHICK (Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.645e-26
Identity = 72/177 (40.68%), Postives = 103/177 (58.19%), Query Frame = 1
Query:   88 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASVEDKLEILAFRQVKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPVMCNKLSDQSEI---ENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 606
            S + LV +A G+EEME V+  D++RRA   V VA +  K  +   R V +  D  +++A K   YD+IVLPGG  GAQ  ++S  + ++L+ Q+       AICA P  +L  HG+  G K    P+  +K+ + +     E+RV  DGN++TSRGPGTS EF LAIVE   G+  A
Sbjct:    3 SKRALVILAKGAEEMETVIPTDVMRRAGIKVTVAGLTGKEPVQCSRDVLICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESAAVKDILKDQESRKGLIAAICAGPTALLA-HGIGFGSKVITHPLAKDKMMNGAHYCYSESRVEKDGNILTSRGPGTSFEFGLAIVEALMGKEVA 178          
BLAST of CX070115 vs. ExPASy Swiss-Prot
Match: PARK7_HUMAN (Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.260e-25
Identity = 72/180 (40.00%), Postives = 105/180 (58.33%), Query Frame = 1
Query:   88 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASVEDKLEILAFRQVKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPVMCNKLSDQSEI---ENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALEL 615
            S + LV +A G+EEME V+ +D++RRA   V VA +  K  +   R V +  D  +++A K   YD++VLPGG  GAQ  ++S  +  +L++Q+       AICA P  +L  H +  G K T  P+  +K+ +       ENRV  DG ++TSRGPGTS EFALAIVE   G+  A ++
Sbjct:    3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLA-HEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQV 181          
BLAST of CX070115 vs. ExPASy Swiss-Prot
Match: PARK7_BOVIN (Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.260e-25
Identity = 73/177 (41.24%), Postives = 104/177 (58.76%), Query Frame = 1
Query:   88 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASVEDKLEILAFRQVKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPVMCNKL---SDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 606
            S + LV +A G+EEME V+ +D++RRA   V VA +  K  +   R V +  D  +++A K   YD++VLPGG  GAQ  ++S  +  +L++Q++      AICA P  +L  H +  G K T  P+  +K+   S  S  ENRV  DG ++TSRGPGTS EFAL IVE   G+  A
Sbjct:    3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQEKRKGLIAAICAGPTALLA-HEIGFGSKVTTHPLAKDKMMNGSHYSYSENRVEKDGLILTSRGPGTSFEFALKIVEVLVGKEVA 178          
BLAST of CX070115 vs. ExPASy Swiss-Prot
Match: PARK7_CERAE (Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.645e-25
Identity = 71/180 (39.44%), Postives = 105/180 (58.33%), Query Frame = 1
Query:   88 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASVEDKLEILAFRQVKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPVMCNKLSDQSEI---ENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALEL 615
            S + LV +A G+EEME V+ +D++RRA   V +A +  K  +   R V +  D  +++A K   YD++VLPGG  GAQ  ++S  +  +L++Q+       AICA P  +L  H +  G K T  P+  +K+ +       ENRV  DG ++TSRGPGTS EFALAIVE   G+  A ++
Sbjct:    3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTIAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLA-HEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQV 181          
BLAST of CX070115 vs. ExPASy Swiss-Prot
Match: PARK7_MESAU (Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.149e-25
Identity = 74/177 (41.81%), Postives = 103/177 (58.19%), Query Frame = 1
Query:   88 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASVEDKLEILAFRQVKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPVMCNKL---SDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 606
            S + LV +A G+EEME V+ +DI+RRA   V VA +  K  +   R V +  D  +++A K   YD++VLPGG  GAQ  ++S  +  +L++Q+       AICA P  +L  H +  G K T  P   +K+   S  S  E+RV  DG ++TSRGPGTS EFALAIVE   G+  A
Sbjct:    3 SKRALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKKQGPYDVVVLPGGNLGAQNLSESPVVKEILKEQESRKGLIAAICAGPTALLA-HEIGFGSKVTTHPGAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKEAA 178          
BLAST of CX070115 vs. ExPASy Swiss-Prot
Match: PARK7_RAT (Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.665e-25
Identity = 74/177 (41.81%), Postives = 105/177 (59.32%), Query Frame = 1
Query:   88 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASVEDKLEILAFRQVKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPVMCNKL---SDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 606
            S + LV +A G+EEME V+ +DI+RRA   V VA +  K  +   R V +  D  ++EA     YD++VLPGG  GAQ  ++S  +  +L++Q+       AICA P  +L  H +  G K T+ P+  +K+   S  S  E+RV  DG ++TSRGPGTS EFALAIVE   G++ A
Sbjct:    3 SKRALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVVICPDTSLEEAKTQGPYDVVVLPGGNLGAQNLSESALVKEILKEQENRKGLIAAICAGPTALLA-HEVGFGCKVTSHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKDMA 178          
BLAST of CX070115 vs. ExPASy Swiss-Prot
Match: PARK7_DANRE (Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.665e-25
Identity = 71/176 (40.34%), Postives = 101/176 (57.39%), Query Frame = 1
Query:  100 LVPIANGSEEMEAVMIIDILRRAKANVVVASVEDKLEILAFRQVKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPVMCNKLSDQSEI---ENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALEL 615
            LV +A G+EEME V+ +D++RRA   V VA +  K  +   R+V +  D  +++A K   YD+++LPGGL GAQ  ++S  +  +L+ Q+       AICA P  +L  HG+  G   T  P   +K+         E RV  DGN+ITSRGPGTS EFAL IVE+  G   A ++
Sbjct:    7 LVILAKGAEEMETVIPVDVMRRAGIAVTVAGLAGKEPVQCSREVMICPDSSLEDAHKQGPYDVVLLPGGLLGAQNLSESPAVKEVLKDQEGRKGLIAAICAGPTALLA-HGIAYGSTVTTHPGAKDKMMAGDHYKYSEARVQKDGNVITSRGPGTSFEFALTIVEELMGAEVAAQV 181          
BLAST of CX070115 vs. ExPASy Swiss-Prot
Match: PARK7_MOUSE (Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.252e-25
Identity = 72/177 (40.68%), Postives = 104/177 (58.76%), Query Frame = 1
Query:   88 SPQILVPIANGSEEMEAVMIIDILRRAKANVVVASVEDKLEILAFRQVKLVADVLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLEKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPVMCNKL---SDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 606
            S + LV +A G+EEME V+ +D++RRA   V VA +  K  +   R V +  D  +++A     YD++VLPGG  GAQ  ++S  +  +L++Q+       AICA P  +L  H +  G K T  P+  +K+   S  S  E+RV  DG ++TSRGPGTS EFALAIVE   G++ A
Sbjct:    3 SKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKTQGPYDVVVLPGGNLGAQNLSESPMVKEILKEQESRKGLIAAICAGPTALLA-HEVGFGCKVTTHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALVGKDMA 178          
The following BLAST results are available for this feature:
BLAST of CX070115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
THIJ_SALTY2.453e-2943.65Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=... [more]
THIJ_ECOLI2.453e-2943.65Protein thiJ OS=Escherichia coli (strain K12) GN=t... [more]
PARK7_CHICK9.645e-2640.68Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1[more]
PARK7_HUMAN1.260e-2540.00Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2[more]
PARK7_BOVIN1.260e-2541.24Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1[more]
PARK7_CERAE1.645e-2539.44Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE... [more]
PARK7_MESAU2.149e-2541.81Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1... [more]
PARK7_RAT3.665e-2541.81Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV... [more]
PARK7_DANRE3.665e-2540.34Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1[more]
PARK7_MOUSE6.252e-2540.68Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_14H02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14H02-O4-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070115 ID=CX070115; Name=CX070115; organism=Citrus sinensis; type=EST; length=839bp
GTTTCTGGGCCACTGGTAATGCGTGCAAATCATGGAGATGAATACACTAT
TGCTGAGTTCAATCCAATTCAGTGGACATTTGACAATTCTCCCCAGATTC
TTGTGCCTATTGCGAATGGTTCAGAGGAGATGGAAGCTGTTATGATAATT
GATATTCTGCGACGAGCTAAAGCAAACGTTGTGGTTGCATCGGTTGAGGA
TAAACTAGAAATTCTGGCTTTTCGTCAAGTTAAATTAGTGGCAGATGTGC
TCATTGATGAGGCAGCTAAACTTTCGTATGATTTAATTGTCTTGCCAGGT
GGACTTGGTGGCGCTCAAGCATTTGCGAAGTCAGAGAAATTGGTGAATAT
GCTAGAGAAGCAAAAGGAATCAAATAGACCTTACGGTGCTATATGTGCAT
CCCCAGCTTTAGTGTTGGAGCCCCATGGCTTACTCAAGGGTAAAAAAGCT
ACAGCTTTTCCTGTCATGTGCAACAAGCTGTCAGATCAGAGTGAAATCGA
AAACAGGGTTGTGGTTGATGGCAACCTTATCACCAGCAGAGGGCCAGGAA
CTTCTATGGAGTTTGCACTGGCAATTGTGGAGAAGTTTTTTGGCCGCAAC
AAAGCGCTTGAGCTTGCAAAGATAATGCTTTTCACTCGCACCTAAAGTTT
GTACTGAAACCTGCCTACTATTAAACTAGAGTATTTATTTCTGTATTACT
ACTGCTTGTAGAGAGTGGAAATGGAAACTTGAATTCGTGTTTGAATATGG
ATTCACTGTGCGGGTTTGTACAACAGTTCGTTTATAAATAAATGAGTTCA
TAGTCATTTTGAAAAAAAACCTCCCCCCCTTTTTTTTTT
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