CX070040

Overview
NameCX070040
Unique NameCX070040
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX070040 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.919e-11
Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = -3 
Query:  315 TIDDGFYIDLRPPEVVMRTAATPANASEPL--EFYLITDDTLEFNFYFYFAELTKLQPNESREFNISFNGKHIYGPLSLEYLYSLAIFSVLP-TMSGGD 602
            T D G   D +PP+V + TAA P NAS PL  E+  +  D  ++  Y +F+E+ +LQ NE+REFN+  NGK  +GP+    L    I SV P T  GG+
Sbjct:  232 TSDVGNSNDYKPPKVALTTAAIPTNASAPLTNEWSSVNPDE-QYYVYAHFSEIQELQANETREFNMLLNGKLFFGPVVPPKLAISTILSVSPNTCEGGE 329
The following BLAST results are available for this feature:
BLAST of CX070040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5596_ARATH2.919e-1142.42Probable LRR receptor-like serine/threonine-protei... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_14D08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14D08-G16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070040 ID=CX070040; Name=CX070040; organism=Citrus sinensis; type=EST; length=616bp
CTTATAGCACCTGGTCGAGGTGGTCTGCTCCACCTCATAGCACCTGGTCG
AGGTGATCTGCTCTATCTCATAGCACCTGGTCGATGTGATCTGCTCAAGC
TCATACCACCTGGTCGAGGTCATTTGCTCAAGCTCATACCACATGGTCAT
CTGCTCAAGCTCACACCACCTGGTCAAGGCGATCTGCTCAACCTCATTGT
ACTTGGTCGAGGTGATCTGCTCAAGCTCATACCACCTGGTCAAGGTGACC
TGCTCAACCATTTGCTCACTTTCACTTGGAGGAGATCATGGTCGCTCTAT
TTAATTCCTCAAACATCTCCTCCACTCATCGTTGGCAACACACTGAAAAT
AGCCAATGAGTATAAGTATTCAAGTGACAATGGCCCGTAGATATGCTTCC
CATTGAAAGAAATGTTGAACTCTCTGGACTCATTGGGTTGGAGCTTTGTA
AGTTCGGCAAAGTAAAAGTAGAAATTAAATTCGAGAGTGTCGTCAGTTAT
CAAATAAAATTCTAAGGGCTCACTGGCATTTGCCGGCGTGGCAGCTGTCC
TCATGACAACTTCAGGTGGTCGAAGGTCAATGTAAAAACCATCATCAATT
GTTAATGAAGTGCCCT
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