CX070027

Overview
NameCX070027
Unique NameCX070027
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length529
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3314 contig Csv1_Contig3314:21..549. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX070027 vs. ExPASy Swiss-Prot
Match: NO93_SOYBN (Early nodulin-93 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.412e-31
Identity = 76/107 (71.03%), Postives = 76/107 (71.03%), Query Frame = 3 
Query:   69 MAKNVAQSPLERTSLASLDHKLAMAKRCSHEXXXXXXXXXXXXXXXXXXPTLASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASNMEA 389
            MAK    SPLER SLASLD KLA AKRCSHE                  PTLASVRMLPWARANLNHTAQALIIST   AAYFIVADKTVLATARKNSF Q SN EA
Sbjct:    1 MAKG--NSPLERPSLASLDQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPWARANLNHTAQALIISTATAAAYFIVADKTVLATARKNSFNQPSNSEA 105
The following BLAST results are available for this feature:
BLAST of CX070027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NO93_SOYBN1.412e-3171.03Early nodulin-93 OS=Glycine max PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_14C12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14C12-E24-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070027 ID=CX070027; Name=CX070027; organism=Citrus sinensis; type=EST; length=529bp
TATAACACAGCCTCGTCAATTTCCTCAGCTCATTATTAACATATTCTCCA
TTTTAACTTTCTCAAACAATGGCAAAGAATGTAGCTCAGTCTCCTCTTGA
AAGGACCAGCTTGGCTTCACTTGACCATAAACTGGCTATGGCTAAGCGTT
GCTCTCATGAGGGTGTAATTGCGGGAGCTAAGGCAGCTGTTGTTGCTACG
GTTGCTACTGCCATTCCAACGCTCGCGAGTGTGAGGATGCTTCCTTGGGC
TAGAGCCAACCTCAATCACACTGCTCAAGCTCTTATTATCTCAACAGTGG
CTGGAGCGGCATATTTCATTGTGGCTGACAAGACAGTTCTGGCCACAGCA
CGAAAAAACTCCTTCCAGCAAGCCTCTAACATGGAAGCATAGGTTTTGAA
TTGCTAATTAAATGATTATATGATTCGCTTATGTTGTACTGCGTTATCAT
CATATTCCAATAACCAACTTAGGATGTATATCCGTTATCTACGTATAAAT
AAAAGATGGGTTTCCATTCCAAAAAAAAA
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