CX070016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX070016 vs. ExPASy Swiss-Prot
Match: RBH1B_ARATH (Ras-related protein RABH1B OS=Arabidopsis thaliana GN=RABH1B PE=1 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 2.325e-78 Identity = 151/174 (86.78%), Postives = 158/174 (90.80%), Query Frame = -3 Query: 352 TSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXSRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNLRSTTGNA 873 TSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR SRQSFLNT+KWIDEVRTERGSDVI+VLVGNKTDLV+KRQVSIEE EAK+RELNVMFIETSAKAGFNIK LFRKIAAALPGMETLSSTKQE+MVDVNL+S+ NA Sbjct: 23 TSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSNANA 196
BLAST of CX070016 vs. ExPASy Swiss-Prot
Match: RAB6A_PONAB (Ras-related protein Rab-6A OS=Pongo abelii GN=RAB6A PE=2 SV=3) HSP 1 Score: 250.751 bits (639), Expect = 7.757e-66 Identity = 124/167 (74.25%), Postives = 141/167 (84.43%), Query Frame = -3 Query: 373 TSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXSRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNL 873 TS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M+D+ L Sbjct: 27 TSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKL 193
BLAST of CX070016 vs. ExPASy Swiss-Prot
Match: RAB6A_MOUSE (Ras-related protein Rab-6A OS=Mus musculus GN=Rab6a PE=1 SV=4) HSP 1 Score: 250.751 bits (639), Expect = 7.757e-66 Identity = 124/167 (74.25%), Postives = 141/167 (84.43%), Query Frame = -3 Query: 373 TSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXSRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNL 873 TS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M+D+ L Sbjct: 27 TSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKL 193
BLAST of CX070016 vs. ExPASy Swiss-Prot
Match: RAB6A_HUMAN (Ras-related protein Rab-6A OS=Homo sapiens GN=RAB6A PE=1 SV=3) HSP 1 Score: 250.751 bits (639), Expect = 7.757e-66 Identity = 124/167 (74.25%), Postives = 141/167 (84.43%), Query Frame = -3 Query: 373 TSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXSRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNL 873 TS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M+D+ L Sbjct: 27 TSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKL 193
BLAST of CX070016 vs. ExPASy Swiss-Prot
Match: RAB6A_CHICK (Ras-related protein Rab-6A OS=Gallus gallus GN=RAB6A PE=2 SV=3) HSP 1 Score: 250.366 bits (638), Expect = 1.013e-65 Identity = 123/167 (73.65%), Postives = 141/167 (84.43%), Query Frame = -3 Query: 373 TSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXSRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNL 873 TS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYIR + SF T+KWID+VRTERGSDVII+LVGNKTDL +KRQVSIEEGE K++ELNVMFIETSAKAG+N+K LFR++AAALPGME+ +E+M+D+ L Sbjct: 27 TSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDMIDIKL 193
BLAST of CX070016 vs. ExPASy Swiss-Prot
Match: RBH1C_ARATH (Ras-related protein RABH1C OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.120e-64 Identity = 130/176 (73.86%), Postives = 147/176 (83.52%), Query Frame = -3 Query: 352 TSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXSRQSFLNTSKWIDEVRTERG-SDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLS-STKQEEMVDVNLRSTTGNA 873 TSIITRFMYDKFD TYQ TIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR +RQ+FLNTSKWI++V ERG S+VIIVLVGNKTDLVEKRQVSI EGE K +E VMFIETSAK FNIK LFRKIAAALPG+++ S +TK ++MVDVNL++T+ ++ Sbjct: 23 TSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLATKSDDMVDVNLKTTSNSS 198
BLAST of CX070016 vs. ExPASy Swiss-Prot
Match: RAB6B_MOUSE (Ras-related protein Rab-6B OS=Mus musculus GN=Rab6b PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 9.482e-64 Identity = 119/167 (71.26%), Postives = 139/167 (83.23%), Query Frame = -3 Query: 373 TSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXSRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNL 873 TS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR + SF TSKWID+VRTERGSDVII+LVGNKTDL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K LFR++A+ALPGME + +E M+D+ L Sbjct: 27 TSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKL 193
BLAST of CX070016 vs. ExPASy Swiss-Prot
Match: RAB6B_HUMAN (Ras-related protein Rab-6B OS=Homo sapiens GN=RAB6B PE=1 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 9.482e-64 Identity = 119/167 (71.26%), Postives = 139/167 (83.23%), Query Frame = -3 Query: 373 TSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXSRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNL 873 TS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR + SF TSKWID+VRTERGSDVII+LVGNKTDL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K LFR++A+ALPGME + +E M+D+ L Sbjct: 27 TSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKL 193
BLAST of CX070016 vs. ExPASy Swiss-Prot
Match: RAB6B_BOVIN (Ras-related protein Rab-6B OS=Bos taurus GN=RAB6B PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 9.482e-64 Identity = 119/167 (71.26%), Postives = 139/167 (83.23%), Query Frame = -3 Query: 373 TSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXSRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVNL 873 TS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR + SF TSKWID+VRTERGSDVII+LVGNKTDL +KRQ++IEEGE +++EL+VMFIETSAK G+N+K LFR++A+ALPGME + +E M+D+ L Sbjct: 27 TSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKL 193
BLAST of CX070016 vs. ExPASy Swiss-Prot
Match: RAB6A_CAEEL (Ras-related protein Rab-6.1 OS=Caenorhabditis elegans GN=rab-6.1 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 7.513e-61 Identity = 118/166 (71.08%), Postives = 134/166 (80.72%), Query Frame = -3 Query: 376 TSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRXXXXXXXXXXXXSRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKSRELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSTKQEEMVDVN 873 TSIITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYIR + SF T+KW+D+VR ERG DVIIVLVGNKTDL +KRQVS E+GE K+R+LNVMFIETSAKAG+N+K LFRKIA ALPG+ + +Q +V +N Sbjct: 25 TSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATALPGIVQEETPEQPNIVIMN 190 The following BLAST results are available for this feature:
BLAST of CX070016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 435
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070016 ID=CX070016; Name=CX070016; organism=Citrus sinensis; type=EST; length=875bpback to top |