CX069974
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069974 vs. ExPASy Swiss-Prot
Match: C19L2_MOUSE (CWF19-like protein 2 OS=Mus musculus GN=Cwf19l2 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.944e-34 Identity = 76/183 (41.53%), Postives = 117/183 (63.93%), Query Frame = 2 Query: 248 GRAD-DEYDFEEGPSRKS--RKNRGANDNKGAERAIA--RCIMTQQERCLFCFENPNRPRHLVVAIANFTYLVLPQWQSVVPGHCCILSVQHELATRTVDSHVWDEIRNFKKCLIMMFAKQEKELVFLETVMGLGQQRRHCLIECIPLPQKIAKQAPVYFKKAIDEAEDEWSQHNAKKLIDTS 781 G++D D Y ++ K+ +++ G + RAIA + + + +CL+CF++ P+HL+VAI YL LP +QS+ GHC I+ +QH A +D VW+EI+ F+K L+ MF +E + +FLET MGL ++ H + ECIPLP+++ AP+YFKKAI E+++EWS + KKLID S Sbjct: 620 GKSDEDNYTLDDMFVSKAAEKEHLGKKEESQRRRAIAEHQSLAAKMAKCLYCFDSSQFPKHLIVAIGVKVYLCLPSFQSLTEGHCFIVPLQHHQAATVLDEDVWEEIQMFRKSLVKMFEDKELDCIFLETNMGL-KKHYHMVYECIPLPKEVGDMAPIYFKKAIMESDEEWSMN--KKLIDLS 799
BLAST of CX069974 vs. ExPASy Swiss-Prot
Match: C19L2_HUMAN (CWF19-like protein 2 OS=Homo sapiens GN=CWF19L2 PE=1 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 4.252e-33 Identity = 70/163 (42.94%), Postives = 105/163 (64.42%), Query Frame = 2 Query: 299 RKNRGANDNKGAERAIA--RCIMTQQERCLFCFENPNRPRHLVVAIANFTYLVLPQWQSVVPGHCCILSVQHELATRTVDSHVWDEIRNFKKCLIMMFAKQEKELVFLETVMGLGQQRRHCLIECIPLPQKIAKQAPVYFKKAIDEAEDEWSQHNAKKLIDTS 781 R+ G + ++AIA R + Q E+CL+CF++ P+HL+VAI YL LP +S+ GHC I+ +QH A +D +W+EI+ F+K L+ MF + + +FLET M + +Q H + ECIPLP+++ AP+YFKKAI E+++EWS + KKLID S Sbjct: 643 RERLGEEEENQRKKAIAEHRSLAAQMEKCLYCFDSSQFPKHLIVAIGVKVYLCLPNVRSLTEGHCLIVPLQHHRAATLLDEDIWEEIQMFRKSLVKMFEDKGLDCIFLETNMSMKKQ-YHMVYECIPLPKEVGDMAPIYFKKAIMESDEEWSMN--KKLIDLS 802
BLAST of CX069974 vs. ExPASy Swiss-Prot
Match: C19L2_XENTR (CWF19-like protein 2 OS=Xenopus tropicalis GN=cwf19l2 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.158e-30 Identity = 70/178 (39.33%), Postives = 106/178 (59.55%), Query Frame = 2 Query: 260 DEYDFEEGPSRKSRKNRGANDNKGAERAIA----RCIMTQQERCLFCFENPNRPRHLVVAIANFTYLVLPQWQSVVPGHCCILSVQHELATRTVDSHVWDEIRNFKKCLIMMFAKQEKELVFLETVMGLGQQRRHCLIECIPLPQKIAKQAPVYFKKAIDEAEDEWSQHNAKKLIDTS 781 D Y ++ K+ K + + ER A R + E+C FCF+N P+HL+VAI YL LP S+ GHC I+ +QH A+ +D +++EI+ F+K L+ MF + + VFLE+ + ++R H + ECIPLP+++ AP+YFKKAI E+++EWS + KKLID S Sbjct: 663 DYYTLDDMFVTKAAKKEHTDKEEERERMQAMHEHRSLTATMEKCRFCFDNAELPKHLIVAIGTKVYLCLPNHLSLTEGHCLIVPLQHHTASTLLDEDIYNEIQVFRKALVRMFESKGLDCVFLESNI-YARKRLHLVYECIPLPKEVGDMAPIYFKKAIMESDEEWSMN--KKLIDLS 837
BLAST of CX069974 vs. ExPASy Swiss-Prot
Match: C19L2_DANRE (CWF19-like protein 2 OS=Danio rerio GN=cwf19l2 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.369e-30 Identity = 66/183 (36.07%), Postives = 109/183 (59.56%), Query Frame = 2 Query: 248 GRAD-DEYDFEEG--PSRKSRKNRGANDNKGAERAI--ARCIMTQQERCLFCFENPNRPRHLVVAIANFTYLVLPQWQSVVPGHCCILSVQHELATRTVDSHVWDEIRNFKKCLIMMFAKQEKELVFLETVMGLGQQRRHCLIECIPLPQKIAKQAPVYFKKAIDEAEDEWSQHNAKKLIDTS 781 GR D D Y ++ S ++ G ++ + +A+ R + + E+C CF++ P+HL++A+ YL LP S+ GHC I+ VQH A +D +W EI+ F++ L+ MF QE + VFLET M ++ H + EC+P+P+++ AP+YFKKAI E+++EW+ + KK++D S Sbjct: 694 GRTDGDNYTLDDMFVSSAAQKERAGRDEERQRNKAVQETRRLAGRMEKCPHCFDSAELPKHLIIAVGTKVYLCLPNSVSLTEGHCLIVPVQHHTAATGLDEDIWGEIQMFRRALVRMFESQELDCVFLETHMN-PKRHLHMVYECVPMPRELGDMAPIYFKKAIMESDEEWAMN--KKVVDLS 873
BLAST of CX069974 vs. ExPASy Swiss-Prot
Match: C19L2_DROME (CWF19-like protein 2 homolog OS=Drosophila melanogaster GN=CG9213 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.980e-22 Identity = 59/179 (32.96%), Postives = 95/179 (53.07%), Query Frame = 2 Query: 227 NKQYS--ISGRADDEYDFEEGPSRKSRKNRGANDNKGAERAIA----RCIMTQQERCLFCFENPNRPRHLVVAIANFTYLVLPQWQSVVPGHCCILSVQHELATRTVDSHVWDEIRNFKKCLIMMFAKQEKELVFLETVMGLGQQRRHCLIECIPLPQKIAKQAPVYFKKAIDEAEDEW 745 N QY+ +S + D ++ + K RK A+D + E A ++ + C CF++ + L+V++ + YL LP + + GHC + ++QH +D W+EI NF+K L MFA + +++VF E L +R H + CIP+P + AP YFKKAI+E+E EW Sbjct: 417 NLQYADIVSKHKNPNDDLDDIFADKVRKQISASDAEKREMQSAIREHEKLVATLDNCERCFDSAKLDKQLLVSLGDKIYLSLPWYMGLQSGHCILTTLQHVPCCTQLDEDAWEEISNFRKALTRMFAARRQDVVFYEIANKL-HRRPHLSVHCIPIPASQGEMAPFYFKKAIEESEQEW 594
BLAST of CX069974 vs. ExPASy Swiss-Prot
Match: CWF19_SCHPO (Pre-mRNA-splicing factor cwf19 OS=Schizosaccharomyces pombe GN=cwf19 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.317e-21 Identity = 48/136 (35.29%), Postives = 76/136 (55.88%), Query Frame = 2 Query: 371 ERCLFCFENPNRPRHLVVAIANFTYLVLPQWQSVVPGHCCILSVQHELATRTVDSHVWDEIRNFKKCLIMMFAKQEKELVFLETVMGLGQQRRHCLIECIPLPQKIAKQAPVYFKKAIDEAEDEWSQHNAKKLIDT 778 + C C +P V+++++ Y+ LP + HC I+ H + T + D WDEIRNF KC+ +MF ++F E Q+ H IECIP+ ++I AP YF++A+ +++EWSQH +K+IDT Sbjct: 410 DTCPLCLNYETQPLAPVISLSHRAYVSLPTQPELAKYHCLIVPTGHRINTLSCDEDEWDEIRNFMKCIALMFDSMNLGVIFYENAPS-PQRYMHTAIECIPVSKRILSLAPAYFREALSTSDEEWSQH--RKIIDT 542
BLAST of CX069974 vs. ExPASy Swiss-Prot
Match: C19L2_CAEEL (CWF19-like protein 2 homolog OS=Caenorhabditis elegans GN=B0361.2/B0361.1 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 5.391e-20 Identity = 56/179 (31.28%), Postives = 93/179 (51.96%), Query Frame = 2 Query: 251 RADDEYDFEEGPSRKSRKNRGANDNKGAERAIAR---CIMTQQERCLFCFENPNRPRHLVVAIANFTYLVLPQWQSVVPGHCCILSVQHELATRTVDSHVWDEIRNFKKCLIMMFAKQEKELVFLETVMGLGQQRRHCLIECIPLPQKIAKQAPVYFKKAIDEAEDEWSQHNAKKLIDT 778 R DDE + +K +K D K E+ + I + C C ++ +H ++A+ TYL + +W + H I+ QH +T +D +VWDE+R ++K L+ ++ Q ++ +F E + H IEC+P+ Q+I A +YFKKAI+E E E+ + KKLI+T Sbjct: 194 RHDDESVDDIAEMQKGKKKSDEKDKKRKEKESIKEHKRIERSFDDCSRCIDSSRLKKHNIIAVGINTYLAVVEWDGLDDEHLIIVPTQHCSSTIQLDENVWDEMRLWRKGLVAVWKSQNRDCIFFEMSRHV-DSNPHVFIECVPVEQEIGDMASIYFKKAINECEGEYMDN--KKLIET 369 The following BLAST results are available for this feature:
BLAST of CX069974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069974 ID=CX069974; Name=CX069974; organism=Citrus sinensis; type=EST; length=786bpback to top |