CX069973
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069973 vs. ExPASy Swiss-Prot
Match: C19L2_MOUSE (CWF19-like protein 2 OS=Mus musculus GN=Cwf19l2 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.213e-53 Identity = 103/221 (46.61%), Postives = 147/221 (66.52%), Query Frame = -2 Query: 174 RCLFCFENPNRPRHLVVAIANFTYLVLPQWQSVVPGHCCILSVQHELATRTVDSHVWDEIRNFKKCLIMMFAKQEKELVFLETVMGLGQQRRHCLIECIPLPQKIAKQAPVYFKKAIDEAEDEWSQHNAKKLIDTSVKGLCGSIPKDFPYFHVEFGLNKGFVHVIDDETQFKSSFGLNVIRGMLRLPEEDMYRHRRHESVETQKQAVATFAQDWEPFDWTK 836 +CL+CF++ P+HL+VAI YL LP +QS+ GHC I+ +QH A +D VW+EI+ F+K L+ MF +E + +FLET MGL ++ H + ECIPLP+++ AP+YFKKAI E+++EWS + KKLID S K + S+P+ PYF V+FGL GF H+I+D+ +F FG +I GML L E ++R ES E Q++ FAQ W+P+D TK Sbjct: 667 KCLYCFDSSQFPKHLIVAIGVKVYLCLPSFQSLTEGHCFIVPLQHHQAATVLDEDVWEEIQMFRKSLVKMFEDKELDCIFLETNMGL-KKHYHMVYECIPLPKEVGDMAPIYFKKAIMESDEEWSMN--KKLIDLSSKDIRKSVPRGLPYFAVDFGLQGGFAHIIEDQYRFPHYFGKEIIGGMLDL-EPRLWRKGIRESFEDQRKKSLQFAQWWKPYDITK 883
BLAST of CX069973 vs. ExPASy Swiss-Prot
Match: C19L2_HUMAN (CWF19-like protein 2 OS=Homo sapiens GN=CWF19L2 PE=1 SV=3) HSP 1 Score: 206.453 bits (524), Expect = 1.601e-52 Identity = 101/224 (45.09%), Postives = 148/224 (66.07%), Query Frame = -2 Query: 174 QQERCLFCFENPNRPRHLVVAIANFTYLVLPQWQSVVPGHCCILSVQHELATRTVDSHVWDEIRNFKKCLIMMFAKQEKELVFLETVMGLGQQRRHCLIECIPLPQKIAKQAPVYFKKAIDEAEDEWSQHNAKKLIDTSVKGLCGSIPKDFPYFHVEFGLNKGFVHVIDDETQFKSSFGLNVIRGMLRLPEEDMYRHRRHESVETQKQAVATFAQDWEPFDWTK 845 Q E+CL+CF++ P+HL+VAI YL LP +S+ GHC I+ +QH A +D +W+EI+ F+K L+ MF + + +FLET M + +Q H + ECIPLP+++ AP+YFKKAI E+++EWS + KKLID S K + S+P+ PYF V+FGL+ GF HVI+D+ +F FG +I GML + E ++R ES E Q++ FAQ W+P+D+TK Sbjct: 667 QMEKCLYCFDSSQFPKHLIVAIGVKVYLCLPNVRSLTEGHCLIVPLQHHRAATLLDEDIWEEIQMFRKSLVKMFEDKGLDCIFLETNMSMKKQ-YHMVYECIPLPKEVGDMAPIYFKKAIMESDEEWSMN--KKLIDLSSKDIRKSVPRGLPYFSVDFGLHGGFAHVIEDQHKFPHYFGKEIIGGMLDI-EPRLWRKGIRESFEDQRKKALQFAQWWKPYDFTK 886
BLAST of CX069973 vs. ExPASy Swiss-Prot
Match: C19L2_XENTR (CWF19-like protein 2 OS=Xenopus tropicalis GN=cwf19l2 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 1.038e-51 Identity = 102/223 (45.74%), Postives = 146/223 (65.47%), Query Frame = -2 Query: 171 ERCLFCFENPNRPRHLVVAIANFTYLVLPQWQSVVPGHCCILSVQHELATRTVDSHVWDEIRNFKKCLIMMFAKQEKELVFLETVMGLGQQRRHCLIECIPLPQKIAKQAPVYFKKAIDEAEDEWSQHNAKKLIDTSVKGLCGSIPKDFPYFHVEFGLNKGFVHVIDDETQFKSSFGLNVIRGMLRLPEEDMYRHRRHESVETQKQAVATFAQDWEPFDWTKQ 839 E+C FCF+N P+HL+VAI YL LP S+ GHC I+ +QH A+ +D +++EI+ F+K L+ MF + + VFLE+ + ++R H + ECIPLP+++ AP+YFKKAI E+++EWS + KKLID S K + ++PK PYF V+FGL G+ HVI+DE +F S FG +I GML L E ++R E E Q++ V FAQ W+PFD TK+ Sbjct: 704 EKCRFCFDNAELPKHLIVAIGTKVYLCLPNHLSLTEGHCLIVPLQHHTASTLLDEDIYNEIQVFRKALVRMFESKGLDCVFLESNI-YARKRLHLVYECIPLPKEVGDMAPIYFKKAIMESDEEWSMN--KKLIDLSTKDIRRAVPKGLPYFSVDFGLQGGYAHVIEDEHKFPSYFGKEIIGGMLDL-EPRIWRKAVRERFEDQRKKVLEFAQWWKPFDVTKE 922
BLAST of CX069973 vs. ExPASy Swiss-Prot
Match: C19L2_DANRE (CWF19-like protein 2 OS=Danio rerio GN=cwf19l2 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.832e-48 Identity = 92/224 (41.07%), Postives = 142/224 (63.39%), Query Frame = -2 Query: 174 QQERCLFCFENPNRPRHLVVAIANFTYLVLPQWQSVVPGHCCILSVQHELATRTVDSHVWDEIRNFKKCLIMMFAKQEKELVFLETVMGLGQQRRHCLIECIPLPQKIAKQAPVYFKKAIDEAEDEWSQHNAKKLIDTSVKGLCGSIPKDFPYFHVEFGLNKGFVHVIDDETQFKSSFGLNVIRGMLRLPEEDMYRHRRHESVETQKQAVATFAQDWEPFDWTK 845 + E+C CF++ P+HL++A+ YL LP S+ GHC I+ VQH A +D +W EI+ F++ L+ MF QE + VFLET M ++ H + EC+P+P+++ AP+YFKKAI E+++EW+ + KK++D S + + ++P+ PYF V+FGL GF HVI++E +F FG ++ GML L E +R E+ + Q++ V FAQ W+PFD TK Sbjct: 738 RMEKCPHCFDSAELPKHLIIAVGTKVYLCLPNSVSLTEGHCLIVPVQHHTAATGLDEDIWGEIQMFRRALVRMFESQELDCVFLETHMN-PKRHLHMVYECVPMPRELGDMAPIYFKKAIMESDEEWAMN--KKVVDLSKRDIRQAVPRGLPYFSVDFGLQGGFAHVIENEQKFPHYFGKEILGGMLDL-EPRRWRKPIRENFDDQRKKVLKFAQWWKPFDCTK 957
BLAST of CX069973 vs. ExPASy Swiss-Prot
Match: C19L2_CAEEL (CWF19-like protein 2 homolog OS=Caenorhabditis elegans GN=B0361.2/B0361.1 PE=2 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 2.030e-39 Identity = 85/223 (38.12%), Postives = 128/223 (57.40%), Query Frame = -2 Query: 165 CLFCFENPNRPRHLVVAIANFTYLVLPQWQSVVPGHCCILSVQHELATRTVDSHVWDEIRNFKKCLIMMFAKQEKELVFLETVMGLGQQRRHCLIECIPLPQKIAKQAPVYFKKAIDEAEDEWSQHNAKKLIDTSVKGLCGSIPKDFPYFHVEFGLNKGFVHVIDDETQFKSSFGLNVIRGMLRLPEEDMYRHRRHESVETQKQAVATFAQDWEPFDWTKQLE 833 C C ++ +H ++A+ TYL + +W + H I+ QH +T +D +VWDE+R ++K L+ ++ Q ++ +F E + H IEC+P+ Q+I A +YFKKAI+E E E+ + KKLI+T K L IPK F YF V+FGL+ GF HVI+ F S+F +I GML LP + +R R + + QK F + WEP DWTK+L+ Sbjct: 239 CSRCIDSSRLKKHNIIAVGINTYLAVVEWDGLDDEHLIIVPTQHCSSTIQLDENVWDEMRLWRKGLVAVWKSQNRDCIFFEMSRHV-DSNPHVFIECVPVEQEIGDMASIYFKKAINECEGEYMDN--KKLIET--KDLRRQIPKGFSYFAVDFGLSNGFAHVIESHDHFPSTFATEIIAGMLDLPPK-KWRKRETDEMSKQKSRAENFKKLWEPVDWTKRLK 455
BLAST of CX069973 vs. ExPASy Swiss-Prot
Match: C19L2_DROME (CWF19-like protein 2 homolog OS=Drosophila melanogaster GN=CG9213 PE=1 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 1.718e-38 Identity = 83/222 (37.39%), Postives = 129/222 (58.11%), Query Frame = -2 Query: 174 ERCLFCFENPNRPRHLVVAIANFTYLVLPQWQSVVPGHCCILSVQHELATRTVDSHVWDEIRNFKKCLIMMFAKQEKELVFLETVMGLGQQRRHCLIECIPLPQKIAKQAPVYFKKAIDEAEDEWSQHNAKKLIDTSVKGLCGSIPKDFPYFHVEFGLNKGFVHVIDDETQFKSSFGLNVIRGMLRLPEEDMYRHRRHESVETQKQAVATFAQDWEPFDWTK 839 + C CF++ + L+V++ + YL LP + + GHC + ++QH +D W+EI NF+K L MFA + +++VF E L +R H + CIP+P + AP YFKKAI+E+E EW + K+L+ K L +IPK PY V FG++ GF HVI+DE +F ++F ++ GML L + +R R E+ K V +FA++W+ FD T+ Sbjct: 471 DNCERCFDSAKLDKQLLVSLGDKIYLSLPWYMGLQSGHCILTTLQHVPCCTQLDEDAWEEISNFRKALTRMFAARRQDVVFYEIANKL-HRRPHLSVHCIPIPASQGEMAPFYFKKAIEESEQEWCIN--KQLVSLRQKSLRAAIPKGLPYVWVHFGMDSGFAHVIEDEDRFPANFAQEILGGMLEL-NPNAWRKPRKEANPIGK--VKSFAENWKKFDCTQ 686
BLAST of CX069973 vs. ExPASy Swiss-Prot
Match: CWF19_SCHPO (Pre-mRNA-splicing factor cwf19 OS=Schizosaccharomyces pombe GN=cwf19 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.541e-29 Identity = 77/237 (32.49%), Postives = 119/237 (50.21%), Query Frame = -2 Query: 168 ERCLFCFENPNRPRHLVVAIANFTYLVLPQWQSVVPGHCCILSVQHELATRTVDSHVWDEIRNFKKCLIMMFAKQEKELVFLETVMGLGQQRRHCLIECIPLPQKIAKQAPVYFKKAIDEAEDEWSQHNAKKLIDTSVKGLCGS-----------IPKDFPYFHVEFGLNKGFVHVIDDETQF--KSSFGLNVIRGMLRLPEEDMYRHRRHESVETQKQAVATFAQDWEPFDWTKQL 839 + C C +P V+++++ Y+ LP + HC I+ H + T + D WDEIRNF KC+ +MF ++F E Q+ H IECIP+ ++I AP YF++A+ +++EWSQH +K+IDT L GS + K+ YFHV F ++ G+ HV++DE + V ML LP E + R + ++ + F +E FDWTK L Sbjct: 410 DTCPLCLNYETQPLAPVISLSHRAYVSLPTQPELAKYHCLIVPTGHRINTLSCDEDEWDEIRNFMKCIALMFDSMNLGVIFYENAPS-PQRYMHTAIECIPVSKRILSLAPAYFREALSTSDEEWSQH--RKIIDT----LEGSKKYGKWAFRKMMVKELGYFHVWFSIDGGYGHVVEDEKAWGRHDQVPRQVFASMLNLPPEVIRRKGSWTGKKDPREDM--FRSRFEKFDWTKGL 637
BLAST of CX069973 vs. ExPASy Swiss-Prot
Match: C3H59_ORYSJ (Zinc finger CCCH domain-containing protein 59 OS=Oryza sativa subsp. japonica GN=Os09g0364000 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.487e-15 Identity = 58/220 (26.36%), Postives = 97/220 (44.09%), Query Frame = -2 Query: 183 QERCLFCFENPNRPRHLVVAIANFTYLVLPQWQSVVPGHCCILSVQHELATRTVDSHVWDEIRNFKKCLIMMFAKQEKELVFLETVMGLGQQRRHCLIECIPLPQKIAKQAPVYFKKAIDEAEDEWSQHNAKKLIDTSVKGLCGSIPKDFPYFHVEFGLNKGFVHVIDDETQFKSSFGLNVIRGMLRLPEEDMYRHRRHESVETQKQAVATFAQDWEPFD 842 + C FC +P+ HLV++I Y L + +VP H ++ V+H +T + E+ +K L F KQ K ++ E V QQ RH ++ +P+P A F A E+S N + + + L F+VE +H++D +F + FG V+ G+L + + +R+ + S E + Q V F Q + FD Sbjct: 396 ESSCWFCLSSPDVESHLVISIGEGYYCALAKGP-LVPNHVLVIPVEHCSSTLKMPVEAEAELGRYKDALAKYFEKQGKIAIYFEWV---SQQSRHANLQAVPVPLSKASSVKKIFHLAAQRLGFEFSVVNPDGDANRARELLRSECDSKSSLFYVELPEGSVLLHLVDSNEKFPAQFGREVLAGLLSMADRADWRNCK-VSKEEEIQMVDDFKQGFREFD 610
BLAST of CX069973 vs. ExPASy Swiss-Prot
Match: C3H64_ARATH (Zinc finger CCCH domain-containing protein 64 OS=Arabidopsis thaliana GN=At5g56900 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.608e-12 Identity = 56/223 (25.11%), Postives = 100/223 (44.84%), Query Frame = -2 Query: 183 QQERCLFCFENPNRPRHLVVAIANFTYLVLPQWQSVVPGHCCILSVQHELATRTVDSHVWDEIRNFKKCLIMMFAKQEKELVFLETVMGLGQQRRHCLIECIPLPQKIAKQAPVYFKKAIDEAEDEWSQHNAKKLIDTSV--KGLCGSIPKDFPYFHVEFGLNKGFVHVIDDETQFKSSFGLNVIRGMLRLPEEDMYRHRRHESVETQKQAVATFAQDWEPFD 845 + + C FC +P+ HL+V++ Y LP+ S+V H I+ ++H T + V E+ ++ L + Q + VF E V ++ H ++ +P+P A+ P F A AE + KK D++ K L F+VE H +++ F + FG V+ G+L++P+ +R+ + E K A F + ++ FD Sbjct: 379 RSKECWFCLSSPSVESHLIVSVGESFYCALPKG-SLVEDHILIIPIEHLPNTLVLSPEVESELSRYQNGLRNCYKSQGNDAVFFELV---SKRVSHANLQVVPVPSSRARLLPNIFSLA---AEKLGFKLVTKKFNDSTDGRKYLQKEYNAALGLFYVELPDGTVLSHTLEENEVFPAQFGREVLAGLLKIPDRADWRNCKISQEEEAKLA-EDFKKQFQEFD 593 The following BLAST results are available for this feature:
BLAST of CX069973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069973 ID=CX069973; Name=CX069973; organism=Citrus sinensis; type=EST; length=852bpback to top |