CX069967

Overview
NameCX069967
Unique NameCX069967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX069967 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.599e-58
Identity = 112/117 (95.73%), Postives = 115/117 (98.29%), Query Frame = 3 
Query:  162 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 512
            MA+SSFKLEHPLERRQAE+ RIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN LPPTAA+MSAIYEENKDEDGFLYMTYSGENTFG
Sbjct:    1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
[Close]
BLAST of CX069967 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.599e-58
Identity = 112/117 (95.73%), Postives = 115/117 (98.29%), Query Frame = 3 
Query:  162 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 512
            MA+SSFKLEHPLERRQAE+ RIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN LPPTAA+MSAIYEENKDEDGFLYMTYSGENTFG
Sbjct:    1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
[Close]
BLAST of CX069967 vs. ExPASy Swiss-Prot
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana GN=ATG8C PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.787e-57
Identity = 108/117 (92.31%), Postives = 114/117 (97.44%), Query Frame = 3 
Query:  162 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 512
            MA SSFKLEHPLERRQ ES+RIREKYPDRIPVIVE+AERSD+P+IDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIF+FVKN LPPTAAMMSAIY+ENKDEDGFLYMTYSGENTFG
Sbjct:    1 MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117
[Close]
BLAST of CX069967 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 9.800e-56
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 3 
Query:  162 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 512
            MAKSSFKL+H LERRQAE+ RIREKY DRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKN LPPTAA+MSAIYEENKDEDGFLYMTYSGENTFG
Sbjct:    1 MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
[Close]
BLAST of CX069967 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 9.800e-56
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 3 
Query:  162 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 512
            MAKSSFKL+H LERRQAE+ RIREKY DRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKN LPPTAA+MSAIYEENKDEDGFLYMTYSGENTFG
Sbjct:    1 MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
[Close]
BLAST of CX069967 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSJ (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica GN=ATG8A PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.672e-55
Identity = 104/119 (87.39%), Postives = 116/119 (97.48%), Query Frame = 3 
Query:  162 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAS 518
            MA++SFKLEHPLERRQAESARIREKY DRIPVIVEKA+++D+P+IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIF+FVKN LPPTA++MSAIYEENKDEDGFLYMTYSGENTFG++
Sbjct:    1 MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGSA 119
[Close]
BLAST of CX069967 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSI (Autophagy-related protein 8A OS=Oryza sativa subsp. indica GN=ATG8A PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.672e-55
Identity = 104/119 (87.39%), Postives = 116/119 (97.48%), Query Frame = 3 
Query:  162 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAS 518
            MA++SFKLEHPLERRQAESARIREKY DRIPVIVEKA+++D+P+IDKKKYLVPADLTVGQFVYVVRKRIKLS EKAIF+FVKN LPPTA++MSAIYEENKDEDGFLYMTYSGENTFG++
Sbjct:    1 MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGSA 119
[Close]
BLAST of CX069967 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.724e-55
Identity = 106/120 (88.33%), Postives = 115/120 (95.83%), Query Frame = 3 
Query:  162 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGASF 521
            MA SSFK EHPLE+RQAE+ARIREKYPDRIPVIVE+AE+SD+PDID+KKYLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKNILPPTAA+MSAIYEE+KDEDGFLYM+YSGENTFG  F
Sbjct:    1 MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFGIFF 120
[Close]
BLAST of CX069967 vs. ExPASy Swiss-Prot
Match: ATG8A_ARATH (Autophagy-related protein 8a OS=Arabidopsis thaliana GN=ATG8A PE=1 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.565e-53
Identity = 102/118 (86.44%), Postives = 112/118 (94.92%), Query Frame = 3 
Query:  162 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGA 515
            MAKSSFK+ +PLE R +ES+RIREKYPDRIPVIVEKA +SD+PDIDKKKYLVPADLTVGQFVYVVRKRIKL AEKAIF+FVKN LPPTAA+MSAIYEE+KDEDGFLYMTYSGENTFG+
Sbjct:    1 MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 118
[Close]
BLAST of CX069967 vs. ExPASy Swiss-Prot
Match: ATG8B_ARATH (Autophagy-related protein 8b OS=Arabidopsis thaliana GN=ATG8B PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.014e-52
Identity = 100/120 (83.33%), Postives = 110/120 (91.67%), Query Frame = 3 
Query:  162 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGASF 521
            M K+SFKL +PLE R AES RIR KYP+R+PVIVEKA +SD+PDIDKKKYLVPADLT+GQFVYVVRKRIKL AEKAIF+FVKN LPPTAA+MSAIYEE+KDEDGFLYMTYSGENTFG SF
Sbjct:    1 MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGGSF 120
The following BLAST results are available for this feature:
BLAST of CX069967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8C_ORYSJ3.599e-5895.73Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8C_ORYSI3.599e-5895.73Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8C_ARATH6.787e-5792.31Autophagy-related protein 8c OS=Arabidopsis thalia... [more]
ATG8B_ORYSJ9.800e-5693.16Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8B_ORYSI9.800e-5693.16Autophagy-related protein 8B OS=Oryza sativa subsp... [more]
ATG8A_ORYSJ1.672e-5587.39Autophagy-related protein 8A OS=Oryza sativa subsp... [more]
ATG8A_ORYSI1.672e-5587.39Autophagy-related protein 8A OS=Oryza sativa subsp... [more]
ATG8D_ARATH3.724e-5588.33Autophagy-related protein 8d OS=Arabidopsis thalia... [more]
ATG8A_ARATH1.565e-5386.44Autophagy-related protein 8a OS=Arabidopsis thalia... [more]
ATG8B_ARATH1.014e-5283.33Autophagy-related protein 8b OS=Arabidopsis thalia... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_14A03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14A03-A6-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069967 ID=CX069967; Name=CX069967; organism=Citrus sinensis; type=EST; length=757bp
TTTTCTTTCACCCCACTCTTTGAATAATTTTTTTTTTTCAATTTCTTTAA
TGGCGTACAAGAGAACAAAATAAAAAGGAAGTTTCTTGAAAAATAATAAT
CCACAACAATAATTTGTCTACTCTTGATCAGCAGAAGCAGTAGAAAGAAC
AAGGAGAAGCTATGGCCAAGAGCTCCTTCAAGCTTGAACACCCACTCGAA
AGGAGGCAGGCTGAATCTGCCCGTATCAGGGAGAAGTATCCTGATAGAAT
ACCAGTGATTGTGGAGAAGGCTGAAAGGAGTGACATACCTGATATTGACA
AAAAAAAATACCTGGTTCCTGCTGATCTGACTGTTGGACAATTTGTTTAT
GTGGTCCGGAAGAGGATAAAGCTCAGTGCTGAGAAGGCCATATTCATATT
TGTCAAGAACATTTTGCCACCCACTGCTGCAATGATGTCTGCAATTTATG
AGGAAAACAAAGATGAGGATGGCTTCCTTTACATGACTTACAGTGGGGAG
AACACATTCGGGGCATCTTTCTAAGGGAATCAACTGAACTTCTGTAGATT
AACTCTGAAAAGACTTGATGGAAATATGTAAATCCTTTGCTATTTGCTTT
CAACTGAGGGAGCACTTGGAAAGCATGATCTTCCTGGACGCAGCCCCTTC
TTAAAGTTTGGATCTATTGTTACTCCTCTTTATCTTATTTGTTGCAGTAA
ATATTCGTGATTTCATATTGGATGAGCAAGTTAATACAGGTACTGTTGGA
TTACTAA
back to top