CX069948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069948 vs. ExPASy Swiss-Prot
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.568e-41 Identity = 94/176 (53.41%), Postives = 107/176 (60.80%), Query Frame = -3 Query: 291 IRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXLRGDFARLNFPNLRHNGSHIGGEFGEYKPLHSSVDAKLAAICENLAETQKLGTSKKEKQSNSAQKKRHRSGNKKXXXXXXXXXXXXXVKNECSLSDGSAGSSPVSDLTCQDLTEPPSELELDAASENFMLQKYPSYEIDWASILS 818 IRLP+NRTRLWLGTFDT LRGDFARLNFPNLRHNGSHIGG+FGEYKPLHSSVDAKL AIC+++AETQK K K S +KK + + +AGSSP+SDLT D EPP +E F L+KYPSYEIDW SIL+ Sbjct: 167 IRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHNGSHIGGDFGEYKPLHSSVDAKLEAICKSMAETQK--QDKSTKSSKKREKKVSSPDLSEKVKAEENSVSIGGSPPVTEFEESTAGSSPLSDLTFADPEEPPQ------WNETFSLEKYPSYEIDWDSILA 334
BLAST of CX069948 vs. ExPASy Swiss-Prot
Match: ERF58_ARATH (Ethylene-responsive transcription factor ERF058 OS=Arabidopsis thaliana GN=ERF058 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.395e-27 Identity = 84/176 (47.73%), Postives = 98/176 (55.68%), Query Frame = -3 Query: 294 IRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXLRGDFARLNFPNLRHNGSHIGGEFGEYKPLHSSVDAKLAAICENLAE-TQKLGTSKKEKQSNSAQKKRHRSGNKKXXXXXXXXXXXXXVKNECSLSDGSAGSSPVSDLTCQDLTEPPSELELDAASENFMLQKYPSYEIDWASIL 818 IRLP+NRTRLWLGTFDT LRGDFARLNFP+LRHN EY+PL SSVDAKL AIC+NLAE TQK S K+ S+ +KR + K + E S GS SSP+S+LT D +E E+ L+KYPSYEIDW SIL Sbjct: 98 IRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPDLRHN--------DEYQPLQSSVDAKLEAICQNLAETTQKQVRSTKK----SSSRKRSSTVAVKLPEEDYSSAGSSPLLTESYGSGGS--SSPLSELTFGD-----TEEEIQPPWNENALEKYPSYEIDWDSIL 254
BLAST of CX069948 vs. ExPASy Swiss-Prot
Match: ERF55_ARATH (Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF055 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.630e-22 Identity = 76/176 (43.18%), Postives = 90/176 (51.14%), Query Frame = -3 Query: 291 IRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXLRGDFARLNFPNLRHNGSHIGGEFGEYKPLHSSVDAKLAAICENLAETQKLGTSKKEKQSNSAQKKRHRSGNKKXXXXXXXXXXXXXVKNECSLSDGSAGSSPVSDLTCQDLTEPPSELELDAASENFMLQKYPSYEIDWASILS 818 IRLP+NRTRLWLGTFDT LRGD ARLNFP LR+ + GEY P+ ++VDAKL AI LAE K K E+ S K S + + SDGS SP SD+ Q++ + P +ENFML K PSYEIDWASILS Sbjct: 158 IRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNFPALRYQTGSSPSDTGEYGPIQAAVDAKLEAI---LAE-PKNQPGKTERTSRKRAKAAASSAEQ---------PSAPQQHSGSGESDGS--GSPTSDVMVQEMCQEPEM----PWNENFMLGKCPSYEIDWASILS 314
BLAST of CX069948 vs. ExPASy Swiss-Prot
Match: ERF60_ARATH (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana GN=ERF060 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.877e-19 Identity = 68/177 (38.42%), Postives = 88/177 (49.72%), Query Frame = -3 Query: 297 IRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXLRGDFARLNFPNLRHNGSHIGGEFGEYKPLHSSVDAKLAAICENLAETQKLGTSKKEKQSNSAQKKRHRSGNKKXXXXXXXXXXXXXVKNECSLSDGS--AGSSPVSDLTC-QDLTEPPSELELDAASENFMLQKYPSYEIDWASI 818 IRLPKNRTRLWLGTFDT LRG+FARLNFP RH + GG + PLHSSVDAKL IC++L +T+ + E + + + S +E S SD S SSP S +T D ++ + +F L+K+PS EIDW +I Sbjct: 108 IRLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFPQFRHEDGYYGGG-SCFNPLHSSVDAKLQEICQSLRKTEDIDLPCSETELFPPKTEYQES------------EYGFLRSDENSFSDESHVESSSPESGITTFLDFSDSGFD-----EIGSFGLEKFPSVEIDWDAI 266
BLAST of CX069948 vs. ExPASy Swiss-Prot
Match: ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF056 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.835e-17 Identity = 63/184 (34.24%), Postives = 85/184 (46.20%), Query Frame = -3 Query: 297 IRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXLRGDFARLNFPNLRHNGSHIGGEFGEYKPLHSSVDAKLAAICENLAETQKLGTSKKEKQSNSAQKKRHRSG----------NKKXXXXXXXXXXXXXVKNECSLSDGSAGSSPVSDLTCQDLTEPPSELELDAASENFMLQKYPSYEIDWASI 818 IRLPKNRTRLWLGTF+T LRGD A+LNFPNL H + PL SSVD KL AIC++L +T+++ + + + S ++ K+ +E SL D S SD T D ++ E +F L+K+PS EIDW +I Sbjct: 86 IRLPKNRTRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNFPNLIHE---------DMNPLPSSVDTKLQAICKSLRKTEEICSVSDQTKEYSVYSVSDKTELFLPKAELFLPKREHLETNELSNESPRSDETSLLDESQAEYSSSDKTFLDFSDTEFE-----EIGSFGLRKFPSVEIDWDAI 255
BLAST of CX069948 vs. ExPASy Swiss-Prot
Match: ERF57_ARATH (Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana GN=ERF057 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.359e-13 Identity = 61/175 (34.86%), Postives = 82/175 (46.86%), Query Frame = -3 Query: 297 IRLPKNRTRLWLGTFDTXXXXXXXXXXXXXXLRGDFARLNFPNLRHNGSHIGGEFGEYKPLHS-SVDAKLAAICENLAETQKLGTSKKEKQSNSAQKKRHRSGNKKXXXXXXXXXXXXXVKNECSLSDGSAGSSPVSDLTCQDLTEPPSELELDAASENFMLQKYPSYEIDWASI 818 IRLPKNRTRLWLGTF+T +RGD ARLNFP++ G YK + S S++AK+ +IC + L + EKQ+ + + S +K G +GSSP SD+T D + S+ + S L KYPS EIDW +I Sbjct: 126 IRLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNARLNFPDIVRQ--------GHYKQILSPSINAKIESIC----NSSDLPLPQIEKQNKTEEVLSGFSKPEKEPEFGEIYGC------------GYSGSSPESDITLLDFS---SDCVKEDESFLMGLHKYPSLEIDWDAI 273 The following BLAST results are available for this feature:
BLAST of CX069948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069948 ID=CX069948; Name=CX069948; organism=Citrus sinensis; type=EST; length=820bpback to top |