CX069941

Overview
NameCX069941
Unique NameCX069941
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8426 contig Csv1_Contig8426:869..1651. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.412e-36
Identity = 78/234 (33.33%), Postives = 134/234 (57.26%), Query Frame = -1
Query:  106 RWASGLIDVSISRFCPLLYGPSRMSLLLSMCYG-----EMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMI---AVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPS 783
            RW  G + +S+SR+ P L G  ++ L L M Y       ++ FP LY      + T+P LC LNGI L+PE +SP+F+  +++ ++A    L E +  G S   W N QR+W+I+ +TS+   ++D   ++LG+ ++ F  T KV D + ++RY+ G  +F + S   V + ++ +LN+A +V G+ R++     G  + LF Q +L + I+ IN  + E + +R+DKG +  S
Sbjct:  499 RWTEGFLQISLSRYSPFLLGHGKIKLGLQMGYSVCGFWAVNSFPTLY------YVTIPSLCFLNGISLFPEKTSPWFIPFAYVMVAAYSCSLAESLQCGDSAVEWWNAQRMWLIRRITSYLLATIDTFRRILGISESGFNLTVKVTDLQALERYKKGMMEFGSFSAMFVILTTVALLNLACMVLGISRVLLQEGPGGLETLFLQAVLCVLIVAINSPVYEALFLRRDKGSLPAS 726          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 9.153e-36
Identity = 86/223 (38.57%), Postives = 126/223 (56.50%), Query Frame = -1
Query:  115 RWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRI 783
            RW+ G   + +S+    L+G  ++SL L M Y    L+     LP   +  +P L L+ G PL+PE+ SP+     ++F       L E + +G ++  W N QR+WM+K +TS+ YG +D I KLLGL K SF  T KV D ++ KRYE    +F +SS   V + ++ +LN   LV G+ +++A G W+    QV+L   I+I N  I E M VRKDKGRI
Sbjct:  487 RWSEGNFTIFLSKHNTFLFGHGKISLQLQMGYCIYGLWAA-NSLPTIYYVMIPALGLVKGTPLFPEIMSPWATPFIYVFCVKTLYSLYEALLSGDTLKGWWNGQRMWMVKRITSYLYGFIDTIRKLLGLSKMSFEITAKVSDGDEAKRYEQEILEFGSSSPEFVIIATVALLNFVCLVAGLSKIMA-GVWNVFLPQVILCGLIVITNIPIYEAMFVRKDKGRI 707          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.933e-35
Identity = 75/224 (33.48%), Postives = 134/224 (59.82%), Query Frame = -1
Query:  115 RWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVL-DNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRI 783
            RW+ GL++V+ SR+ PL YG   +SLL+S+ Y   + +P  +C+PL  +  LPQ+ L++G+ ++P+ S P+F +   +FL    + L + +  GG+   W N+QR+WM++ ++S F+G  +  +K L L    +  T+K   DNEQ+KRYE   FDF  SS   +P+ ++ I+N+ A + G+  +   G    L  +++L+ + ++    I E M++R D G++
Sbjct:  478 RWSVGLLEVAFSRYNPLTYGIKPLSLLMSLGYCHYAFWPF-WCIPLVVYGILPQVALIHGVSVFPKASDPWFWLYIILFLGGYAQDLSDFLLEGGTYRKWWNDQRMWMVRGLSSFFFGFTEFTLKTLNLSTQGYNVTSKSNDDNEQMKRYEQEIFDFGPSSSMFLPITTVAIMNLLAFMRGLYGIFTWGEGPVL--ELMLASFAVVNCLPIYEAMVLRIDDGKL 698          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.726e-34
Identity = 78/225 (34.67%), Postives = 133/225 (59.11%), Query Frame = -1
Query:  112 RWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVL-DNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRIS 783
            RWA GL ++S S++ P+ YG   + LL+ + Y   S F   + +PL  +  LPQL L++G+ ++P+ S P+F +   +F  A  + L + +  GG+   W N+QR+ MIK ++S F+G ++ I+K L L    F  T+K   D+EQ KRYE   FDF TSS   +P+ ++ I+N+ A V G+  ++  G   +L+ +++L  + ++    I   M++RKD G++S
Sbjct:  488 RWAVGLFEMSFSKYSPITYGIKSLDLLMGLGYCN-SPFKPFWSIPLTVYGLLPQLALISGVSVFPKASDPWFWLYIILFFGAYAQDLSDFLLEGGTYRKWWNDQRMLMIKGLSSFFFGFIEFILKTLNLSTPKFNVTSKANDDDEQRKRYEQEIFDFGTSSSMFLPLTTVAIVNLLAFVWGLYGILFCGG--ELYLELMLVSFAVVNCLPIYGAMVLRKDDGKLS 709          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 8.567e-34
Identity = 81/226 (35.84%), Postives = 128/226 (56.64%), Query Frame = -1
Query:  115 RWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIA-VGN--WDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRI 783
            RW+ G + + +S++C  L+G  ++ L L M Y    L+     LP   +  +P L L+ G PL+P++ SP+     ++F       L E + +G ++  W N QR+WM+KS+TS+ YG +D I K +G+ K SF  T KV  +++ KRYE    +F +SS   V + ++ +LN   LV G+ +++A V N  W+    Q +L   I+IIN  I E M +RKD GRI
Sbjct:  492 RWSEGNLTIFLSKYCSFLFGHGKIKLQLQMGYCICGLWAA-NSLPTLYYVVIPSLGLVKGTPLFPQIMSPWATPFIYVFCVKTLYGLYEALLSGDTLKGWWNGQRMWMVKSITSYLYGFIDTIRKCVGMSKMSFEVTAKVSGHDEAKRYEQEILEFGSSSPEYVIIATVALLNFVCLVGGLSQIMAGVWNMPWNVFLPQAILCGMIVIINMPIYEAMFLRKDNGRI 716          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.786e-31
Identity = 73/234 (31.20%), Postives = 133/234 (56.84%), Query Frame = -1
Query:  106 RWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCL------PLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIA--VGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPS 783
            RW+ G   + +S++ P+ YG  ++SL L + Y         YCL      P+  ++ L  LCL  GIPL+P+VSS +F+   ++ ++A    L E +  GG+   W NEQR+W+ +  +S  +G MD I KLLG+ +++F+ T KV + E  +RY+    +F   S   + + +L +LN+      V R+++   G+   +  Q +++  +++IN+ + +GM++R+DKG++  S
Sbjct:  484 RWSEGDFQIMLSKYSPVWYGKGKISLGLILGY-------CCYCLWAPSSLPVLIYSVLTSLCLFKGIPLFPKVSSSWFIPFGYVTVAATAYSLAEFLWCGGTFRGWWNEQRMWLYRRTSSFLFGFMDTIKKLLGVSESAFVITAKVAEEEAAERYKEEVMEFGVESPMFLVLGTLGMLNLFCFAAAVARLVSGDGGDLKTMGMQFVITGVLVVINWPLYKGMLLRQDKGKMPMS 710          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 5.197e-31
Identity = 76/224 (33.93%), Postives = 129/224 (57.59%), Query Frame = -1
Query:  115 RWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDN-EQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRI 783
            RWA GL++V+ISR+ P+ YG   M L+  + Y + + +   + LPL  +  LPQL LL    ++P+ S P+F +   +FL A  + L + +  GG+   W N+QR+W I+  +SH +G ++  +K L L    F  T+K  D+ EQ KRYE   F+F  SS   +P+ ++ I+N+ A V G+  + A G  + L  +++L+ + ++    I E M++R D G++
Sbjct:  507 RWAIGLLEVAISRYSPITYGVKSMGLVTGVGYCQYACWAF-WSLPLIVYGFLPQLALLYQSSVFPKSSDPWFWLYIVLFLGAYGQDLLDFVLEGGTYGGWWNDQRMWSIRGFSSHLFGFIEFTLKTLNLSTHGFNVTSKANDDEEQSKRYEKEIFEFGPSSSMFLPLTTVAIVNLLAFVWGLYGLFAWG--EGLVLELMLASFAVVNCLPIYEAMVLRIDDGKL 727          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.338e-23
Identity = 68/225 (30.22%), Postives = 119/225 (52.89%), Query Frame = -1
Query:  124 RWASGLIDVSISRFCPLLYGPS--RMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVY-TWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783
            RWA G +++ +SR CPL YG S  R+ LL  + Y    ++P    LPL  + TLP +CLL G  + P +S+   M+   +F+S I   + E+  +G S+   WRNEQ  W+I  V++H +      +K+L     +F  T+K  D+      E G+      +  L+P  SL+I+N+  +V G    +  G   W  LF +V  + ++++  +  ++G++ R+++
Sbjct:  724 RWALGSVEIFLSRHCPLWYGCSGGRLKLLQRLAYINTIVYPFT-SLPLVAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQ-FWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADD-----LEFGELYIVKWTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQNR 941          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.410e-22
Identity = 65/226 (28.76%), Postives = 119/226 (52.65%), Query Frame = -1
Query:  124 RWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNG---IPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMI--AVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783
            RWA G +++ +SR CPL Y    R+  L    Y    ++P    +PL  + T+P +CLL G   IP    ++S +F+ L   FLS I   + E+  +G S+  W   ++ W+I  V++H +     ++K+LG    +F  T+K   +E     E+  F + T    LVP  +L+I+N+  +V GV   +    G+W  LF ++  S ++++  +  ++G++ R+++
Sbjct:  803 RWALGSVEIFMSRHCPLWYAYGGRLKWLERFAYTNTIVYPFT-SIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFIAL---FLSIIATGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAAADETDAFGELYLFKWTT---LLVPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVILHLYPFLKGLMGRQNR 1021          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.760e-22
Identity = 62/224 (27.68%), Postives = 118/224 (52.68%), Query Frame = -1
Query:  124 RWASGLIDVSISRFCPLLYGPSRMSL--LLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGN--WDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783
            RWA G +++  SR  PLLYG    +L  L    Y   +++P    LPL  + TLP +CLL G  + P +S+   +    +F+S     + E+  +G S+  W   ++ W+I  V++H +  +  ++K+L     +F  T+K   +E  +  E+  F + T    L+P  +L+ILN+  +V GV   I  G+  W  LF ++  + ++++  +  ++G++ R+++
Sbjct:  794 RWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFT-SLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKWTT---LLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNR 1013          
The following BLAST results are available for this feature:
BLAST of CX069941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CSLE2_ORYSJ1.412e-3633.33Cellulose synthase-like protein E2 OS=Oryza sativa... [more]
CSLE6_ORYSJ9.153e-3638.57Cellulose synthase-like protein E6 OS=Oryza sativa... [more]
CSLG2_ARATH5.933e-3533.48Cellulose synthase-like protein G2 OS=Arabidopsis ... [more]
CSLG1_ARATH1.726e-3434.67Cellulose synthase-like protein G1 OS=Arabidopsis ... [more]
CSLE1_ORYSJ8.567e-3435.84Cellulose synthase-like protein E1 OS=Oryza sativa... [more]
CSLE1_ARATH1.786e-3131.20Cellulose synthase-like protein E1 OS=Arabidopsis ... [more]
CSLG3_ARATH5.197e-3133.93Cellulose synthase-like protein G3 OS=Arabidopsis ... [more]
CESA8_ARATH2.338e-2330.22Cellulose synthase A catalytic subunit 8 [UDP-form... [more]
CESA7_ORYSJ4.410e-2228.76Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA9_ORYSJ5.760e-2227.68Cellulose synthase A catalytic subunit 9 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13G09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13G09-M17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069941 ID=CX069941; Name=CX069941; organism=Citrus sinensis; type=EST; length=783bp
TTTTTTTTTTTTTTGAAACTCTCTACACTTCGCTTAAAATTAAATAAGAA
TGATAGATCCAAAGAACAAGAAAGTCACAAAAAATAGGCTTGATAATAAA
ATGGCTGATGGCGAAATTCTTCCCTTGTCCTTTCTCACTATCATCCCTTC
AACAATTGCAAAATTGATGATCAAGATGTAGAGTGAGAGCAACACTTGCG
CAAACAACTTGTCCCAGTTGCCCACAGCAATCATTCTGATAACTCCGCAA
ACCAAGGCTGCCACGTTCAAAATCATCAAAGAAACCATAGGAACAAGAAA
CACAGAGGATGTTTGAAAATCAAATTGGCCCATTTCATATCTTTTGACTT
GTTCATTATCTAAAACCTTGTTGGTTGGCAAGAAACTGGCTTTCCTCAAG
CCAAGAAGTTTCATAATAGCATCCATACTTCCATAGAAATGAGATGTGAC
AGACTTTATCATCCAAATTCTCTGCTCATTTCTCCATGTATAGACTGAAC
CTCCAGTTGAAATGACCTCTTGCAAGTGTTTACAAATCGCCGATAAGAAA
ATGAATGAAAGTACCATAAAGAAAGGACTTGAAACCTCAGGGTACAGAGG
GATGCCGTTTAGCAGACACAACTGAGGAAGAGTAGCAAAACACCAGAGAG
GCAAGCAATAAAGAAGAGGGAACAACGACATCTCTCCATAGCACATGCTC
AGAAGTAAAGACATCCTTGACGGTCCGTAAAGTAGAGGGCAGAATCTCGA
GATACTGACGTCAATCAACCCAGAGGCCCATCT
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