CX069932
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069932 vs. ExPASy Swiss-Prot
Match: DAPB1_ARATH (Dihydrodipicolinate reductase 1, chloroplastic OS=Arabidopsis thaliana GN=DAPB1 PE=2 SV=2) HSP 1 Score: 315.079 bits (806), Expect = 3.234e-85 Identity = 162/238 (68.07%), Postives = 196/238 (82.35%), Query Frame = 3 Query: 147 SSRINRQSSNSGNGNVAFSRKRSL-VPPVLSMSATGASTKEHLETPMSKNLHIPIMVNSCTGKMGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDTSGTAKAVISCFQKLGVSFDMD 857 +SR N+ G G V+F + +P VLSM+A S +E +++ + N I IMVN C+GKMGKAVIKAAD+AG+ +VP+SFG+ E GQ+VEVCGKEI VHG ++RE VL+SVF+K+P +IVVDYT+P+AVN NAELYSKVGVPFVMGTTGGDR +L+ET+E + +YAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSL V+ESHQA KLD SGTAKAVISCFQ+LGVS+DMD Sbjct: 22 ASRTNQTVGKYGKGRVSFMGIGTRRLPVVLSMTAMADSGEEAVKSVLPGN-GISIMVNGCSGKMGKAVIKAADSAGVNIVPISFGSAGEDGQRVEVCGKEITVHGPTEREKVLSSVFEKHPELIVVDYTIPSAVNDNAELYSKVGVPFVMGTTGGDRNKLYETVEEAKIYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLDVMESHQASKLDASGTAKAVISCFQELGVSYDMD 258
BLAST of CX069932 vs. ExPASy Swiss-Prot
Match: DAPB2_ARATH (Dihydrodipicolinate reductase 2, chloroplastic OS=Arabidopsis thaliana GN=DAPB2 PE=2 SV=1) HSP 1 Score: 312.768 bits (800), Expect = 1.605e-84 Identity = 162/241 (67.22%), Postives = 191/241 (79.25%), Query Frame = 3 Query: 138 FTGSSRINRQSSNSGNGNVAF-SRKRSLVPPVLSMSATGASTKEHLETPMSKNLHIPIMVNSCTGKMGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDTSGTAKAVISCFQKLGVSFDMD 857 F+ SSR N+ G V+F + P VLSM + T E ++ I IMVN C+GKMGKAVIKAAD+AG+ +VP SFG+ EE+GQ VEVCGKEI VHG ++RE VL+SVF+KYP +IVVDYT+P+AVN NAELY KVGVPFVMGTTGGDR RL++T+E S +YAVISPQMGKQVVAFLAAMEIM+EQFPGAF+GYSL+V+ESHQA KLD SGTAKAVISCFQKLGVS+DMD Sbjct: 22 FSFSSRTNQMVPLGFKGRVSFIGNVKRCFPVVLSMGKS--ETFEEAGNSVAPGNGISIMVNGCSGKMGKAVIKAADSAGVNIVPTSFGSVEEAGQTVEVCGKEILVHGPTEREKVLSSVFEKYPELIVVDYTIPSAVNDNAELYGKVGVPFVMGTTGGDRTRLYKTVEESKIYAVISPQMGKQVVAFLAAMEIMSEQFPGAFAGYSLEVMESHQASKLDASGTAKAVISCFQKLGVSYDMD 260
BLAST of CX069932 vs. ExPASy Swiss-Prot
Match: DAPB1_ORYSJ (Probable dihydrodipicolinate reductase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAPB1 PE=2 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 2.840e-73 Identity = 143/213 (67.14%), Postives = 171/213 (80.28%), Query Frame = 3 Query: 225 PVLSMSATGASTKEHLET-PMSKNLH-IPIMVNSCTGKMGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDTSGTAKAVISCFQKLGVSFDMD 857 P+ +S T A + LE+ P + H PI+VNSCTGKMGKAV +AA +AGL+LVPVSF E KVE+C +EI + S+ ES+L S+ YP+MIVVDYTVP AVN NAELY K+G+PFVMGTTGG+R LH+T+E++NVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGY L+V+ESHQA KLD SGTAKAVISCFQKLGVSF+++ Sbjct: 42 PMARLSITNALASQSLESAPAAPPKHSFPILVNSCTGKMGKAVAEAAVSAGLQLVPVSFSAIEVPDGKVEICDREIYIRDPSEGESILPSIAKDYPDMIVVDYTVPDAVNANAELYCKLGLPFVMGTTGGNRQLLHKTVEDANVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYKLEVMESHQATKLDISGTAKAVISCFQKLGVSFNLN 254
BLAST of CX069932 vs. ExPASy Swiss-Prot
Match: DAPB2_ORYSJ (Probable dihydrodipicolinate reductase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAPB2 PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 3.363e-66 Identity = 121/185 (65.41%), Postives = 156/185 (84.32%), Query Frame = 3 Query: 303 PIMVNSCTGKMGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDTSGTAKAVISCFQKLGVSFDMD 857 PI+VN CTGKMG +V +A ++GL LVP+SF + + + V V +++++G S RE VL+SV D++P+++VVDYT P +VN NAELY K+G+PFVMGTTGGDR L++++++SN YA+ISPQMGKQVVAFLAAMEIMAEQFPGAFSGY L+VLESHQAGKLD SGTAKAVI+CF+KLGVS+DM+ Sbjct: 52 PILVNGCTGKMGLSVAEAVTSSGLHLVPISFSSRDTLDRTVRVGHTDVRIYGPSAREDVLSSVIDEFPDVVVVDYTAPDSVNANAELYCKLGLPFVMGTTGGDRQLLYKSVQDSNNYALISPQMGKQVVAFLAAMEIMAEQFPGAFSGYHLEVLESHQAGKLDISGTAKAVIACFEKLGVSYDMN 236
BLAST of CX069932 vs. ExPASy Swiss-Prot
Match: DAPB_CYAP7 (Dihydrodipicolinate reductase OS=Cyanothece sp. (strain PCC 7424) GN=dapB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.886e-11 Identity = 63/201 (31.34%), Postives = 96/201 (47.76%), Query Frame = 3 Query: 282 MSKNLHIPIMVNSCTGKMGKAVIKAADAA-------GLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTG--GDRVR-LHETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDT-SGTAKAVISCFQKLGVSFD 851 M+K IP++VN GKMGK VIKA A ++L P G E++G+ V CG ++V L D +SVL + ++VD+T P V N GV V+GTTG G++++ L E E ++ +I P ++ A ++ F ++++E H K D SGTA +LG SF+ Sbjct: 1 MTKESPIPVVVNGAAGKMGKEVIKAVSQAEDMMLVGAVDLNPKYRG--EDAGE-VAGCG-PVEVPILDDLQSVLVLATQEKVQGVMVDFTHPDGVYDNIRSAIAYGVRPVVGTTGLSGEQIKDLGEFAEKASTGCLIVPNFSIGMILLQQAAVQASQYFD------HVEIIELHHNQKADAPSGTAIKTAEMLSELGKSFN 191 The following BLAST results are available for this feature:
BLAST of CX069932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069932 ID=CX069932; Name=CX069932; organism=Citrus sinensis; type=EST; length=858bpback to top |