CX069929

Overview
NameCX069929
Unique NameCX069929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX069929 vs. ExPASy Swiss-Prot
Match: ABIL5_ORYSJ (Probable protein ABIL5 OS=Oryza sativa subsp. japonica GN=Os01g0760900 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.769e-12
Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = -3 
Query:  590 YICNALITVVDHLGNVSANLDNCIPNSNAYSEAELRINSLKQRLLSCELYAHKLALNRVKWNVVLPRYHRRYLSAPIEDVGRSNEKSG 853
            YIC+A++ V+DHLG VS+ L+  +      ++ E ++N LKQRLL+CE YA  L L  V+ +    +YHRRYLS   +  G + E++G
Sbjct:   79 YICDAIVAVIDHLGTVSSKLEQQLQEKIEITQTEKKLNFLKQRLLTCEQYAITLKLLTVRGDNDAIQYHRRYLS---QSTGGTKEENG 163
The following BLAST results are available for this feature:
BLAST of CX069929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ABIL5_ORYSJ4.769e-1242.05Probable protein ABIL5 OS=Oryza sativa subsp. japo... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_13G02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13G02-M3-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069929 ID=CX069929; Name=CX069929; organism=Citrus sinensis; type=EST; length=858bp
TTTTTTTCAACTANTGTGATTTTGGGGGATCTCATTAATTATCATTAACC
AAAGATAAAACTCACTAAAATTATACATATGAGATTATATTAAAAATTTA
GAAGAACAGCATATCATCGAAGAACTGGTCTTAAATTTTATGCAAAGAAA
GCCATAAAAAGCAAGCCACGGATTAGATCAAATGGCAAAAGCTTGATTGC
TTTTAAACTTTCATCTTGTTCTTTTTAGTTCTCCGAATAAGTGACATGAT
TTCAGTGCTCTGAAATGATCTGCGTAAGCTCCTGCGTCCAGGATTCCGAT
TACCCAGCTGGAAATGAAAAATGGGATTTGGACCTTTAGCCAGAATTGAG
ATGCCATCTCGAACAGGCAAAAGTACGCGAGCTGATGCTAAATTAGGATC
ACATTCGACGACAGAATTTTTGAATTTGTCGACAGAATTCTTCGATGGTA
GATTCTTAATTGCAGATGACTTGTCAGCGAACGTATACATGAAAAGTGGC
ACATCCTGTATGTCAAATTCTTGCTTATCTGTGATTTTTGCATTACTCGG
AAACCTGCAGTCCCACGATGGTGCAGAAGGTCCCTGGTATCCAGACTTCT
CATTTGATCTACCAACATCCTCGATTGGTGCTGACAAATAACGCCGGTGA
TATCTTGGCAGAACTACATTCCACTTAACTCTGTTCAGAGCAAGCTTGTG
TGCATACAGCTCACATGAGAGAAGCCTTTGTTTGAGGGAGTTGATTCGAA
GCTCCGCCTCAGAATACGCATTACTATTAGGAATGCAGTTATCAAGATTA
GCGGAGACGTTTCCCAGATGATCAACAACGGTGATTAAAGCGTTGCATAT
GTACTCTT
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