CX069908

Overview
NameCX069908
Unique NameCX069908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length485
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL7_ARATH (4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana GN=4CLL7 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 5.983e-65
Identity = 116/161 (72.05%), Postives = 135/161 (83.85%), Query Frame = 1
Query:    1 VTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VTH+WVVPP+ LAL+K  +VKKFDLSSLK +GSGAAPLGK+LMEEC +N+P+  ++QGYG+TET GI ++E+   G RN GSAG LAPGVEA IVSV+T K  PPNQ GEIW+RGPNMM+GY NN QATK TIDKK WVHTGDLGYF+ DG LYVVDRIKE
Sbjct:  282 VTHLWVVPPVFLALSKQSIVKKFDLSSLKYIGSGAAPLGKDLMEECGRNIPNVLLMQGYGMTETCGIVSVEDPRLGKRNSGSAGMLAPGVEAQIVSVETGKSQPPNQQGEIWVRGPNMMKGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIKE 442          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL1_ORYSJ (4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica GN=4CLL1 PE=2 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 1.633e-54
Identity = 103/162 (63.58%), Postives = 128/162 (79.01%), Query Frame = 1
Query:    1 VTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG-SRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VTH++ VPP+I+ALAKHG   K+DLSSLK +GSGAAPLGK++ME  AK  P + ++QGYG+TET GI ++E    G +R  GS G L  GVEA IV + T K LPPNQ+GEI +RGPN+MQGY+NN QAT+ TI K+GW+HTGDLGYFDG GQL+VVDR+KE
Sbjct:  289 VTHLFCVPPVIIALAKHGKAGKYDLSSLKFIGSGAAPLGKDVMEVVAKKFPDSEIVQGYGMTETCGIISLEYPEKGQAREFGSTGTLVSGVEAKIVDIKTLKHLPPNQVGEICVRGPNVMQGYFNNVQATEFTI-KQGWLHTGDLGYFDGGGQLFVVDRLKE 449          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL9_ARATH (4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 9.618e-39
Identity = 79/161 (49.07%), Postives = 106/161 (65.84%), Query Frame = 1
Query:    1 VTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VT + V PPLI+AL K  L KK+DL SL+ +G G APLGK++ E   +  P   ++QGYGLTE+SG A            GS G ++  +EA IV   T + LPP + GE+WLRGP +M+GY  NE+A+  T+DK+GW+ TGDL YFD +  LY+VDR+KE
Sbjct:  296 VTGMPVSPPLIVALVKSELTKKYDLRSLRSLGCGGAPLGKDIAERFKQKFPDVDIVQGYGLTESSGPAASTFGPEEMVKYGSVGRISENMEAKIVDPSTGESLPPGKTGELWLRGPVIMKGYVGNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLKE 456          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL4_ORYSJ (4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica GN=4CLL4 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 4.041e-37
Identity = 75/161 (46.58%), Postives = 107/161 (66.46%), Query Frame = 1
Query:    1 VTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VT++ +VPP+++A+  H   K   L  ++ V SG APLGKEL+E   +  P   ++QGYGLTE++ I    +S   SR  G+AG L+P  EA IV  D+ + LP N+ GE+W+RGP +M+GY+ N +AT+ T+   GW+ TGDL Y D DG L+VVDR+KE
Sbjct:  292 VTYLPLVPPILVAMVAHP--KPLPLGQMRKVLSGGAPLGKELIEGFREKYPQVEILQGYGLTESTAIGASTDSAEESRRYGTAGLLSPNTEAKIVDPDSGEALPVNRTGELWIRGPYVMKGYFKNAEATQSTLTPDGWLKTGDLCYIDEDGYLFVVDRLKE 450          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL2_ARATH (4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana GN=4CLL2 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 5.278e-37
Identity = 73/162 (45.06%), Postives = 111/162 (68.52%), Query Frame = 1
Query:    4 THIWVVPPLILALAK--HGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            +++ +VPP+++A+    + +  K+DLSSL  V +G APL +E+ E+  +N P   ++QGYGLTE++ IA    +   ++  G++G LAP VE  IV  DT + L  NQ GE+W+R P +M+GY+ N++AT  TID +GW+ TGDL Y DGDG ++VVDR+KE
Sbjct:  302 SYLSLVPPIVVAMVNGANEINSKYDLSSLHTVVAGGAPLSREVTEKFVENYPKVKILQGYGLTESTAIAASMFNKEETKRYGASGLLAPNVEGKIVDPDTGRVLGVNQTGELWIRSPTVMKGYFKNKEATASTIDSEGWLKTGDLCYIDGDGFVFVVDRLKE 463          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CL2_SOYBN (4-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 6.893e-37
Identity = 79/159 (49.69%), Postives = 105/159 (66.04%), Query Frame = 1
Query:   16 VVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGS---RNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VVPPL+LALAK+ +V  FDLSS++LV SGAAPLGKEL E     +P A + QGYG+TE   + +M   FA        GS G +    E  +V  +T + L  NQ GEI +RG  +M+GY N+E AT  TID +GW+HTGD+GY D D ++++VDR+KE
Sbjct:  298 VVPPLVLALAKNPMVADFDLSSIRLVLSGAAPLGKELEEALRNRMPQAVLGQGYGMTEAGPVLSMCLGFAKQPFQTKSGSCGTVVRNAELKVVDPETGRSLGYNQPGEICIRGQQIMKGYLNDEAATASTIDSEGWLHTGDVGYVDDDDEIFIVDRVKE 456          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CLL5_ARATH (4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana GN=4CLL5 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 4.468e-36
Identity = 73/162 (45.06%), Postives = 109/162 (67.28%), Query Frame = 1
Query:    4 THIWVVPPLILALAKHG--LVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            T + +VPP+++A+      +  K+DLSS+  V  G APL KE+ E  A+  P+  ++QGYGLTE++GI    ++   SR  G+AG L+  +E  IV   T + L P Q GE+WL+GP++M+GY++NE+AT  T+D +GW+ TGDL Y D DG ++VVDR+KE
Sbjct:  281 TSLPLVPPILVAMVNGADQIKAKYDLSSMHTVLCGGAPLSKEVTEGFAEKYPTVKILQGYGLTESTGIGASTDTVEESRRYGTAGKLSASMEGRIVDPVTGQILGPKQTGELWLKGPSIMKGYFSNEEATSSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKE 442          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CL1_SOYBN (4-coumarate--CoA ligase 1 (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.300e-35
Identity = 76/164 (46.34%), Postives = 107/164 (65.24%), Query Frame = 1
Query:    1 VTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSR---NIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VT   VVPP++LA++K   + K+DLSS++++ SG APLGKEL +      P+A + QGYG+TE   + TM  +FA        G+ G +    E  IV  +T   LP NQ GEI +RG  +M+GY N+ +AT+ TIDK GW+HTGD+GY D D +L++VDR+KE
Sbjct:   25 VTIAPVVPPIVLAISKSPDLHKYDLSSIRVLKSGGAPLGKELEDTLRAKFPNAKLGQGYGMTEAGPVLTMSLAFAKEPIDVKPGACGTVVRNAEMKIVDPETGHSLPRNQSGEICIRGDQIMKGYLNDGEATERTIDKDGWLHTGDIGYIDDDDELFIVDRLKE 188          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CL2_ORYSJ (Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa subsp. japonica GN=4CL2 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 1.698e-35
Identity = 78/164 (47.56%), Postives = 106/164 (64.63%), Query Frame = 1
Query:    1 VTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGS---RNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VT   VVPPL+LALAK+  V++ DLSS+++V SGAAPLGKEL +     +P A   QGYG+TE   + +M  +FA        GS G +    E  +V  DT   L  N  GEI +RGP +M+GY N+ +AT  TID +GW+HTGD+GY D D ++++VDR+KE
Sbjct:  305 VTVAAVVPPLVLALAKNPFVERHDLSSIRIVLSGAAPLGKELEDALRARLPQAIFGQGYGMTEAGPVLSMCPAFAKEPTPAKSGSCGTVVRNAELKVVDPDTGFSLGRNLPGEICIRGPQIMKGYLNDPEATAATIDVEGWLHTGDIGYVDDDDEVFIVDRVKE 468          
BLAST of CX069908 vs. ExPASy Swiss-Prot
Match: 4CL2_PETCR (4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL2 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 2.896e-35
Identity = 73/158 (46.20%), Postives = 105/158 (66.46%), Query Frame = 1
Query:   19 VPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSR---NIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMQGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 483
            VPP++LA+AK  +V K+DLSS++ V SGAAPLGKEL +      P+A + QGYG+TE   +  M  +FA        G+ G +    E  IV  +T   LP NQ GEI +RG  +M+GY N+ ++T+ TID++GW+HTGD+G+ D D +L++VDR+KE
Sbjct:  282 VPPIVLAIAKSPVVDKYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPYEIKSGACGTVVRNAEMKIVDPETNASLPRNQRGEICIRGDQIMKGYLNDPESTRTTIDEEGWLHTGDIGFIDDDDELFIVDRLKE 439          
The following BLAST results are available for this feature:
BLAST of CX069908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
4CLL7_ARATH5.983e-6572.054-coumarate--CoA ligase-like 7 OS=Arabidopsis thal... [more]
4CLL1_ORYSJ1.633e-5463.584-coumarate--CoA ligase-like 1 OS=Oryza sativa sub... [more]
4CLL9_ARATH9.618e-3949.074-coumarate--CoA ligase-like 9 OS=Arabidopsis thal... [more]
4CLL4_ORYSJ4.041e-3746.584-coumarate--CoA ligase-like 4 OS=Oryza sativa sub... [more]
4CLL2_ARATH5.278e-3745.064-coumarate--CoA ligase-like 2 OS=Arabidopsis thal... [more]
4CL2_SOYBN6.893e-3749.694-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2[more]
4CLL5_ARATH4.468e-3645.064-coumarate--CoA ligase-like 5 OS=Arabidopsis thal... [more]
4CL1_SOYBN1.300e-3546.344-coumarate--CoA ligase 1 (Fragment) OS=Glycine ma... [more]
4CL2_ORYSJ1.698e-3547.56Probable 4-coumarate--CoA ligase 2 OS=Oryza sativa... [more]
4CL2_PETCR2.896e-3546.204-coumarate--CoA ligase 1 OS=Petroselinum crispum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13F02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13F02-K3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069908 ID=CX069908; Name=CX069908; organism=Citrus sinensis; type=EST; length=485bp
GTGACACACATATGGGTTGTTCCACCTCTTATTCTTGCATTGGCTAAGCA
TGGTTTGGTCAAGAAATTTGATCTTTCTTCATTGAAACTTGTTGGTTCTG
GTGCTGCTCCTTTGGGAAAGGAATTGATGGAGGAATGCGCAAAGAATGTA
CCTAGTGCAACAGTCATTCAGGGTTATGGTTTGACGGAAACTAGTGGTAT
TGCCACAATGGAGAATTCATTTGCAGGATCTCGAAATATTGGTTCAGCTG
GAGCACTTGCCCCAGGTGTTGAAGCCCTAATAGTCAGTGTGGATACTCAA
AAGCCTCTTCCTCCAAATCAGTTGGGGGAGATATGGCTACGAGGACCTAA
TATGATGCAAGGTTATTACAACAATGAACAAGCCACCAAGCTGACAATAG
ATAAAAAGGGTTGGGTACATACGGGTGATCTTGGATATTTTGATGGGGAT
GGCCAGCTATATGTTGTTGACCGAATCAAAGAGCT
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