DR404105
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: TRXM3_ARATH (Thioredoxin M-type 3, chloroplastic OS=Arabidopsis thaliana GN=At2g15570 PE=2 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 1.169e-48 Identity = 98/163 (60.12%), Postives = 117/163 (71.78%), Query Frame = 2 Query: 128 CFTSAHFAIPRVSSFPSHTPNKLSFPSH---FYAKNATFKAPNRSLSLKVLCVRESRAV-VTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPKEFYIAAIERVLKS 604 CF F R S PS SF F + + + L L LCVR+SRA VT+ SWE S+L S+TPVLVEFY SWCGPCRMVHR+IDEIAG+YAG+L C+++N D DL +AE+YEIKAVPVVLLFKNGEKRE+++GTMPKEFYI+AIERVL S Sbjct: 11 CFNPTRFHTARHISSPSRLFPVTSFSPRSLRFSDRRSLLSSSASRLRLSPLCVRDSRAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVLNS 173
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: TRXM_ORYSJ (Thioredoxin M-type, chloroplastic OS=Oryza sativa subsp. japonica GN=TRXM PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.145e-26 Identity = 51/104 (49.04%), Postives = 74/104 (71.15%), Query Frame = 2 Query: 293 VVTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPKEFYIAAIERVLKS 604 V + +W+ +L S+ PVLVEF+A WCGPCRM+ VIDE+A EY G+++C VNTD IA +Y I+++P VL+FKNGEK+E+V+G +PK I++ + S Sbjct: 69 VADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAVPKTTLATIIDKYVSS 172
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: TRXM_PEA (Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.064e-25 Identity = 47/102 (46.08%), Postives = 74/102 (72.55%), Query Frame = 2 Query: 293 VVTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPKEFYIAAIERVL 598 VV SW++ ++ S+TPVLV+F+A WCGPCRM+ +IDE+A EYAG+++C+ +NTD A Y I+++P VL FKNGE++++V+G +PK +E+ + Sbjct: 71 VVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDESPNTATKYGIRSIPTVLFFKNGERKDSVIGAVPKATLSEKVEKYI 172
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: TRXM_CHLRE (Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii GN=TRXM PE=1 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 6.900e-25 Identity = 50/120 (41.67%), Postives = 78/120 (65.00%), Query Frame = 2 Query: 239 APNRSLSLKVLCVRESRAVVTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPKEFYIAAIERVL 598 AP RS+ VR V D+++ +L S PVLV+F+A WCGPCR++ V+DEIAGEY +L+C +NTD +A +Y I+++P +++FK G+K ET++G +PK + +E+ L Sbjct: 25 APRRSV-----VVRAEAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 139
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.537e-24 Identity = 56/147 (38.10%), Postives = 92/147 (62.59%), Query Frame = 2 Query: 173 PSHTPNKLSFPSHFYAKNATFKAPNRSLSLKVLCVRESRAV-----VTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPKEFYIAAIERVL 598 P+ K SFP+ + + + +P + V+C + S AV V SW++ +L S+ PV+V+F+A WCGPC+++ VIDE+A EY+G++ + +NTD IA Y I+++P VL FKNGE++E+++G +PK +IE+ L Sbjct: 36 PTFRGLKRSFPA--LSSSVSSSSPRQFRYSSVVC-KASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 179
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: TRXM_MAIZE (Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.008e-24 Identity = 48/104 (46.15%), Postives = 72/104 (69.23%), Query Frame = 2 Query: 293 VVTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPKEFYIAAIERVLKS 604 V + +W+ ++ +TPVLVEF+A WCGPCRM+ VIDE+A +YAG++ C VNTD +A Y I+++P VL+FK GEK+E+V+G +PK I++ + S Sbjct: 63 VADEKNWDGLVMACETPVLVEFWAPWCGPCRMIAPVIDELAKDYAGKITCCKVNTDDSPNVASTYGIRSIPTVLIFKGGEKKESVIGAVPKSTLTTLIDKYIGS 166
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: TRXM_WHEAT (Thioredoxin M-type, chloroplastic OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.622e-24 Identity = 53/134 (39.55%), Postives = 85/134 (63.43%), Query Frame = 2 Query: 203 PSHFYAKNATFKAPNRSLSLKVLCVRESRAVVTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPKEFYIAAIERVLKS 604 PS + + + P+R + K V + V + +W+ ++ ++PVLVEF+A WCGPCRM+ VIDE+A +Y G+++C VNTD IA Y I+++P VL+FK+GEK+E+V+G +PK I++ + S Sbjct: 43 PSPYKSALVAARRPSRFVC-KCKNVVDEVIVADEKNWDNMVIACESPVLVEFWAPWCGPCRMIAPVIDELAKDYVGKIKCCKVNTDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLCTIIDKYIGS 175
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: TRXM4_ARATH (Thioredoxin M-type 4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.622e-24 Identity = 44/101 (43.56%), Postives = 71/101 (70.30%), Query Frame = 2 Query: 296 VTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPKEFYIAAIERVL 598 ++ W+ +L SD PVLVEF+A WCGPCRM+H ++D++A ++AG+ + + +NTD A Y I++VP V++FK GEK+++++G +P+E IER L Sbjct: 91 LSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: THIO_GRIPA (Thioredoxin OS=Griffithsia pacifica GN=trxA PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 5.467e-22 Identity = 48/103 (46.60%), Postives = 72/103 (69.90%), Query Frame = 2 Query: 296 VTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPKEFYIAAIERVLKS 604 V S+ + ++NS PVLV+F+A WCGPCRM+ IDEIA +Y +L+ VNTD + TIA +Y I+++P V++F NG+K +TVVG +PK + +++ LKS Sbjct: 6 VIDTSFHEEVINSRQPVLVDFWAPWCGPCRMIASTIDEIAHDYKDKLKVVKVNTDQNPTIATEYGIRSIPTVMIFINGKKVDTVVGAVPKLTLLNTLQKHLKS 108
BLAST of DR404105 vs. ExPASy Swiss-Prot
Match: THIO1_ANASP (Thioredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=trxA PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 5.467e-22 Identity = 46/103 (44.66%), Postives = 72/103 (69.90%), Query Frame = 2 Query: 290 AVVTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPKEFYIAAIERVL 598 A VT ++++ +L+SD PVLV+F+A WCGPCRMV V+DEIA +Y G+++ VNTD + +A Y I+++P +++FK G+K + VVG +PK +E+ L Sbjct: 5 AQVTDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107 The following BLAST results are available for this feature:
BLAST of DR404105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR404105 ID=DR404105; Name=DR404105; organism=Citrus sinensis; type=EST; length=758bpback to top |