CX069899

Overview
NameCX069899
Unique NameCX069899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4316 contig Csv1_Contig4316:1..697. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX069899 vs. ExPASy Swiss-Prot
Match: FBL15_ARATH (F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana GN=FBL15 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 3.989e-37
Identity = 79/138 (57.25%), Postives = 89/138 (64.49%), Query Frame = -2 
Query:  259 ENIHESIDQPNRLLQNLNCVGCPNIRKVFIPPQARCFHXXXXXXXXXXXLKEVDVAXXXXXXXXXXXXXXLETLKLDCPKLTSLFLQSCNIDEEGVESAITQCGMLETLDVRFCPKICSTSMGSLRAACPSLKRIFSS 672
            +N  E  +  NRLLQNLNCVGCPNIRKV IPP AR +H           LKEVD+               LE LKL CP+L SLFLQSCN+DE GVE+AI+ C  LETLD+RFCPKI S SM   R  CPSLKR+FSS
Sbjct:  847 DNTQEPAETANRLLQNLNCVGCPNIRKVLIPPAARFYHLSTLNLSLSVNLKEVDLTCSNLVLLNLSNCCSLEVLKLGCPRLASLFLQSCNMDEAGVEAAISGCSSLETLDLRFCPKISSVSMSKFRTVCPSLKRVFSS 984
The following BLAST results are available for this feature:
BLAST of CX069899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FBL15_ARATH3.989e-3757.25F-box/LRR-repeat protein 15 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_13E10_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13E10-I19-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069899 ID=CX069899; Name=CX069899; organism=Citrus sinensis; type=EST; length=697bp
TTTTTTTTTTTTTAAAACAAACAATGATAAATTAACATAGAAACAGCATT
TTATTGTGTTGTTACACAAAGACAGCCACATCAGGTACAAATAAAAATAT
ACCCAAACAAAAACTGGCGTGAAAGATGACCATTTACAATGACATTAAAA
GCAGATAATGGCAAGAATACCCCGCAGAAAGAAAATAACCACTTAAGCCA
ACGATAATTTTTAAAAAAACAAAGAGCAAAATTTTCTGTTGTATCATGAA
GTGGTCAGGCTGCTGAAGATGCGCTTCAAACTAGGGCACGCTGCACGTAA
GCTGCCCATGCTCGTTGAGCATATCTTTGGACAAAACCGGACATCCAGAG
TCTCAAGCATGCCACACTGAGTGATTGCACTTTCAACCCCTTCTTCATCA
ATGTTACAGGACTGAAGAAATAGACTAGTCAATTTTGGGCAATCAAGCTT
CAATGTTTCCAAAGAGCAGCAATTGCTCAAATTAAGAAAGCACAAATTGA
AACAAGCAACATCAACTTCCTTCAAGTTGGCAGATAGAGATAGATTTAAA
GATGACAAGTGAAAACAGCGGGCCTGGGGTGGGATGAAAACTTTCCTAAT
ATTCGGACAACCGACACAGTTGAGATTCTGCAGTAGGCGGTTGGGCTGGT
CAATTGACTCATGAATGTTCTCATGAGGAAAAATTCCACAGGAGCCT
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