DR404103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 1.420e-84 Identity = 146/152 (96.05%), Postives = 151/152 (99.34%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD 559 MSTPA+KRLMRDFKRLQ DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR+FSENKREYNRRVRE+VEQSWTAD Sbjct: 1 MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREVVEQSWTAD 152
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 1.420e-84 Identity = 146/152 (96.05%), Postives = 152/152 (100.00%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD 559 MSTPA+KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR+FSE+KREYNRRVRE+VEQSWTAD Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVVEQSWTAD 152
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 4.130e-84 Identity = 145/152 (95.39%), Postives = 150/152 (98.68%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD 559 MSTPA+KRLMRDFKRLQQDPPAGISGAP DNNI LWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR++SENKREYNR+VRE+VEQSWTAD Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREVVEQSWTAD 152
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 7.045e-84 Identity = 144/152 (94.74%), Postives = 152/152 (100.00%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTAD 559 MSTPA+KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAAR++SE+KREYNRRVR++VEQSWTAD Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTAD 152
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 1.423e-76 Identity = 134/149 (89.93%), Postives = 143/149 (95.97%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 550 M+TPAKKRLM DFKRLQ+DPP GISGAPQDNNIM WNA+IFGP+DTPWDGGTFKLTL FTEDYPNKPP VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA+LTSIQSLLCDPNP+SPAN+EAARLFSENKREYNR+V EIVEQS+ Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQSY 149
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 270.011 bits (689), Expect = 8.079e-72 Identity = 122/151 (80.79%), Postives = 142/151 (94.04%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSWTA 556 MST A++RLMRDFKRLQ DPPAGISGAP +NNI++W AVIFGPDD+ W+G TFKL+LQF+E+YPN PTV+F+S+MFHPN+YADGSICLDILQNQWSPIYD+AAILTSIQSLLCDPNPNSPANSE+ARLF ENKREYNR+V+EIVEQSW++ Sbjct: 1 MSTAARRRLMRDFKRLQSDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHPNVYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVKEIVEQSWSS 151
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.290e-69 Identity = 118/149 (79.19%), Postives = 140/149 (93.96%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 550 MSTPA++RLMRDFKRLQ+DPPAG+SGAP +NNIM+WNAVIFGP+ TP++ GTFKLT++FTE+YPNKPPTVRFVS+MFHPN+YADGSICLDILQN+WSP YDV++ILTSIQSLL +PNPNSPANS+AA+L+ ENKREY +RV IVEQSW Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSW 149
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 262.692 bits (670), Expect = 1.290e-69 Identity = 118/149 (79.19%), Postives = 140/149 (93.96%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 550 MSTPA++RLMRDFKRLQ+DPPAG+SGAP +NNIM+WNAVIFGP+ TP++ GTFKLT++FTE+YPNKPPTVRFVS+MFHPN+YADGSICLDILQN+WSP YDV++ILTSIQSLL +PNPNSPANS+AA+L+ ENKREY +RV IVEQSW Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSW 149
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 257.684 bits (657), Expect = 4.149e-68 Identity = 116/149 (77.85%), Postives = 137/149 (91.95%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 550 MSTPA++RLMRDFKRLQ+DPP G+SGAP DNNIM+WNAVIFGP DTP++ GTFKLT++FTE+YPNKPPTVRFVS++FHPN+YADG ICLDILQN+WSP YDV+AILTSIQSLL DPNPNSPANS AA+L+ EN+REY +RV+ VEQS+ Sbjct: 1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQSF 149
BLAST of DR404103 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.059e-67 Identity = 114/149 (76.51%), Postives = 137/149 (91.95%), Query Frame = 2 Query: 104 MSTPAKKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRRVREIVEQSW 550 MSTPA++RLMRDFKRLQ+DPP G+SGAP +NNIM WNAVIFGP+ TP++ GTFKL ++F+E+YPNKPPTVRF+S+MFHPN+YADGSICLDILQN+WSP YDV++ILTSIQSLL +PNPNSPANS+AA+L+ ENKREY +RV IVEQSW Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSW 149 The following BLAST results are available for this feature:
BLAST of DR404103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR404103 ID=DR404103; Name=DR404103; organism=Citrus sinensis; type=EST; length=680bpback to top |