CX069891

Overview
NameCX069891
Unique NameCX069891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length504
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3404 contig Csv1_Contig3404:456..959. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069891 vs. ExPASy Swiss-Prot
Match: IFRH_SOLTU (Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.058e-29
Identity = 62/83 (74.70%), Postives = 72/83 (86.75%), Query Frame = 1
Query:    1 LVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 249
            LVSLWE+K GK LE+ YV EEQ+LKNIQEA+ P NV LSIYH+AFVKG  TNF+IEPSFGVEAS++YPDVKYT +DE LNQ+V
Sbjct:  226 LVSLWEKKTGKNLERLYVPEEQVLKNIQEASVPMNVGLSIYHTAFVKGDHTNFEIEPSFGVEASEVYPDVKYTPIDEILNQYV 308          
BLAST of CX069891 vs. ExPASy Swiss-Prot
Match: IFRH_MAIZE (Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 8.094e-26
Identity = 54/83 (65.06%), Postives = 70/83 (84.34%), Query Frame = 1
Query:    1 LVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 249
            L+SLWE+K GKT  +EYV EE +LK IQE+  P N+IL+I H+AFV+G QT F+I+P+ GV+AS+LYPDVKYTTVDEYLN+F+
Sbjct:  227 LLSLWEKKTGKTFRREYVPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL 309          
BLAST of CX069891 vs. ExPASy Swiss-Prot
Match: IFRH_ARATH (Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.076e-25
Identity = 56/82 (68.29%), Postives = 69/82 (84.15%), Query Frame = 1
Query:    1 LVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQF 246
            +V+LWE+KIGK+LEK ++ EEQLLK+IQE+  P NV+LSI H+ FV G  TN  IEPSFGVEAS+LYPDVKYT+VDEYL+ F
Sbjct:  229 IVTLWEKKIGKSLEKTHLPEEQLLKSIQESPIPINVVLSINHAVFVNG-DTNISIEPSFGVEASELYPDVKYTSVDEYLSYF 309          
BLAST of CX069891 vs. ExPASy Swiss-Prot
Match: IFR_MEDSA (Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 4.441e-24
Identity = 51/83 (61.45%), Postives = 69/83 (83.13%), Query Frame = 1
Query:    1 LVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 249
            +++LWE+KIGKTLEK YVSEEQ+LK+IQE++ PHN +L++YHS  +KG    ++I+P+  +EAS+ YPDV YTT DEYLNQFV
Sbjct:  237 VIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKG-DAVYEIDPAKDIEASEAYPDVTYTTADEYLNQFV 318          
BLAST of CX069891 vs. ExPASy Swiss-Prot
Match: IFR_PEA (Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.879e-23
Identity = 51/83 (61.45%), Postives = 67/83 (80.72%), Query Frame = 1
Query:    1 LVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 249
            +++LWE+KIGKTLEK YVSEEQ+LK+IQ ++ PHN +L++YHS  +KG    ++I+P+  VEA   YPDVKYTT DEYLNQFV
Sbjct:  237 VIALWEKKIGKTLEKTYVSEEQVLKDIQTSSFPHNYLLALYHSQQIKG-DAVYEIDPAKDVEAYDAYPDVKYTTADEYLNQFV 318          
BLAST of CX069891 vs. ExPASy Swiss-Prot
Match: IFR_CICAR (Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.429e-22
Identity = 49/83 (59.04%), Postives = 65/83 (78.31%), Query Frame = 1
Query:    1 LVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 249
            +VSLWE+KIGKTLEK Y+SEE++LK+I  +  PHN +L++YHS  +KG    ++I+P+   EA  LYPDVKYTT DEYL+QFV
Sbjct:  237 VVSLWEKKIGKTLEKSYISEEKVLKDINVSTFPHNYLLALYHSQQIKG-DAVYEIDPAKDAEAYDLYPDVKYTTADEYLDQFV 318          
BLAST of CX069891 vs. ExPASy Swiss-Prot
Match: IFRH_TOBAC (Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.580e-21
Identity = 49/83 (59.04%), Postives = 62/83 (74.70%), Query Frame = 1
Query:    1 LVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 249
            +VSLWE KIGKTLEK Y+SEE +L+ +QE   P    L+I HS FV G   NF+++P  GVEA++LYP VKYTTVDE+ N+FV
Sbjct:  228 IVSLWEDKIGKTLEKLYLSEEDILQIVQEGPLPLRTNLAICHSVFVNGDSANFEVQPPTGVEATELYPKVKYTTVDEFYNKFV 310          
BLAST of CX069891 vs. ExPASy Swiss-Prot
Match: IGS1_PETHY (Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.527e-13
Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = 1
Query:    1 LVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYL 237
            LVS WE+  G TL+  ++SE++++K  +    P N+  SI H+ F+ G Q +F++     +EAS+LYP+  YT+VDEYL
Sbjct:  225 LVSSWEKTTGSTLKMTHISEQEIIKLSESINFPENIHASILHNIFIAGAQLSFELTQDHDLEASELYPNYNYTSVDEYL 303          
BLAST of CX069891 vs. ExPASy Swiss-Prot
Match: EGS1_OCIBA (Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.750e-12
Identity = 34/83 (40.96%), Postives = 55/83 (66.27%), Query Frame = 1
Query:    1 LVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 249
            L+S WE+KIGK  +K +V EE+++   +E   P N+ ++I H  F+ G   ++  + +  VEAS LYP++K+TT+DE L+ FV
Sbjct:  222 LISRWEKKIGKKFKKIHVPEEEIVALTKELPEPENIPIAILHCLFIDGATMSYDFKEN-DVEASTLYPELKFTTIDELLDIFV 303          
BLAST of CX069891 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.652e-12
Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 1
Query:    1 LVSLWERKIGKTLEKEYVSEEQLLKNIQEAAPPHNVILSIYHSAFVKGVQTNFKIEPSFGVEASQLYPDVKYTTVDEYLNQFV 249
            L SLWE+KIG+TL +  V+ ++LL +  E   P +++ S  H  F+ G Q NF I+    VE   LYPD K+ ++D+    FV
Sbjct:  235 LASLWEKKIGRTLPRFTVTADKLLAHAAENIIPESIVSSFTHDIFINGCQVNFSIDEHSDVEIDTLYPDEKFRSLDDCYEDFV 317          
The following BLAST results are available for this feature:
BLAST of CX069891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
IFRH_SOLTU2.058e-2974.70Isoflavone reductase homolog OS=Solanum tuberosum ... [more]
IFRH_MAIZE8.094e-2665.06Isoflavone reductase homolog IRL OS=Zea mays GN=IR... [more]
IFRH_ARATH3.076e-2568.29Isoflavone reductase homolog P3 OS=Arabidopsis tha... [more]
IFR_MEDSA4.441e-2461.45Isoflavone reductase OS=Medicago sativa GN=IFR PE=... [more]
IFR_PEA2.879e-2361.45Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 ... [more]
IFR_CICAR5.429e-2259.04Isoflavone reductase OS=Cicer arietinum GN=IFR PE=... [more]
IFRH_TOBAC1.580e-2159.04Isoflavone reductase homolog A622 OS=Nicotiana tab... [more]
IGS1_PETHY3.527e-1341.77Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 P... [more]
EGS1_OCIBA1.750e-1240.96Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=... [more]
LAR_DESUN6.652e-1239.76Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_13E06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13E06-I11-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069891 ID=CX069891; Name=CX069891; organism=Citrus sinensis; type=EST; length=504bp
CTTGTGTCTCTGTGGGAGAGAAAGATTGGTAAAACCCTCGAAAAGGAGTA
TGTTTCAGAGGAGCAGCTCCTAAAGAATATTCAAGAAGCTGCACCTCCAC
ACAATGTGATATTATCAATTTATCACTCTGCTTTCGTGAAGGGAGTTCAA
ACCAACTTCAAGATTGAACCATCTTTTGGAGTTGAAGCCTCGCAGCTTTA
TCCTGATGTCAAGTACACTACAGTTGATGAGTACCTCAATCAGTTTGTGT
AACCCTTCTCTGTTTCCAGCTGCAGCTTGCAGGATCTTGGACTCTTGGTA
AATAAATAATTGGCTTGTTGCCATCTTTGGTTTTATATGTAAAAATTATG
GTTGTTGGCCTTACTTTCTTCTGGTTGTCCATGGAATTTGTTAGACCATA
TTATGTTTGCTATGTCAGTGATCAAATGAAGTAGGCCATGTACTTGATTT
GAGAGTAGTAGTTATAAAGCCATCATGATCAGGTGGGTGCGTGGGTTGGG
CCCT
back to top