DR404094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_ARATH (Cytoplasmic tRNA 2-thiolation protein 1 OS=Arabidopsis thaliana GN=NCS6 PE=2 SV=2) HSP 1 Score: 264.618 bits (675), Expect = 3.137e-70 Identity = 128/149 (85.91%), Postives = 140/149 (93.96%), Query Frame = 2 Query: 206 ESKSKKA-GGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649 E+K+KKA RLC CN R+ LKRPKTL+QICRECFYEVFEEEIHQVIV N+LFK+GER+AIGASGGKDSTVLA+VLSELNRRHNYGLDLFLLSIDEGI+GYRDDSL+TVKRNE+QYGLPLKIVSYKDLYGWTMDEIVK+IGLKNNCT Sbjct: 2 EAKNKKAVASRLCCLCNLRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVQNRLFKSGERVAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVKRNEVQYGLPLKIVSYKDLYGWTMDEIVKMIGLKNNCT 150
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_ORYSJ (Cytoplasmic tRNA 2-thiolation protein 1 OS=Oryza sativa subsp. japonica GN=NCS6 PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 2.486e-67 Identity = 121/143 (84.62%), Postives = 132/143 (92.31%), Query Frame = 2 Query: 221 KAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649 +AG RLC+ C +RKAALKRPKTLEQICRECFY VFE+EIHQ IV N LFK G+R+AIGASGGKDSTVLA+VLSELNRRH Y LDLFLLS+DEGI+GYRDDSL+TVKRNEIQYGLPLKIVSYKDLYGWTMD+IVK IGLKNNCT Sbjct: 14 RAGSRLCTRCGERKAALKRPKTLEQICRECFYVVFEDEIHQTIVDNNLFKPGDRVAIGASGGKDSTVLAYVLSELNRRHKYCLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKIVSYKDLYGWTMDDIVKAIGLKNNCT 156
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_CHLRE (Cytoplasmic tRNA 2-thiolation protein 1 OS=Chlamydomonas reinhardtii GN=NCS6 PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 4.699e-58 Identity = 104/139 (74.82%), Postives = 119/139 (85.61%), Query Frame = 2 Query: 233 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649 RLC CN +A L RPKT EQ+CRECF+ FEEE+HQ IV N+LFK GER+A+ ASGGKDSTVLA ++S LN R+NYGLDLFLLSIDEGI+GYRDDSL+TVKRNE QYG+PLK+VSYK+LYGWTMDEIV IG KNNCT Sbjct: 4 RLCVRCNTSRAMLNRPKTQEQVCRECFFTAFEEEVHQTIVDNKLFKHGERLAVAASGGKDSTVLAHIMSTLNARYNYGLDLFLLSIDEGITGYRDDSLETVKRNEQQYGIPLKVVSYKELYGWTMDEIVSQIGTKNNCT 142
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_DICDI (Cytoplasmic tRNA 2-thiolation protein 1 OS=Dictyostelium discoideum GN=ctu1 PE=2 SV=2) HSP 1 Score: 214.157 bits (544), Expect = 4.863e-55 Identity = 99/148 (66.89%), Postives = 122/148 (82.43%), Query Frame = 2 Query: 206 ESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649 E+ + K +LC CN + LKRPKT E IC+ECFY VFE+EIH I+ N LFK G+R+AIGASGGKDSTVLA +++ LN++++YGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY +PLKI+SYK+LY WTMD+IVK IGLK NCT Sbjct: 2 ENTATKKKSKLCEVCNVSRPVLKRPKTGEMICKECFYTVFEDEIHHTIISNNLFKRGDRVAIGASGGKDSTVLAEIMTLLNKKYDYGLDLFLLSIDEGITGYRDDSLETVKRNQEQYQIPLKILSYKELYNWTMDDIVKEIGLKGNCT 149
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_ASHGO (Cytoplasmic tRNA 2-thiolation protein 1 OS=Ashbya gossypii GN=NCS6 PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.198e-53 Identity = 96/145 (66.21%), Postives = 119/145 (82.07%), Query Frame = 2 Query: 215 SKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649 +K G+LC C+ RKA +KRPK L+++C+ CF+ VFE EIH I+ N+LF+ GER+A+GASGGKDSTVLA++L LN RH+YGL++ LLSIDEGI GYRDDSL TVKRN+ QYGLPLKIVSYKDLY WTMDEIV G++N+CT Sbjct: 12 AKVTAGQLCELCHARKALVKRPKNLQKVCKLCFFHVFETEIHNTIMENKLFQRGERVAVGASGGKDSTVLAYILKLLNERHDYGLEIVLLSIDEGIVGYRDDSLATVKRNQEQYGLPLKIVSYKDLYDWTMDEIVACAGMRNSCT 156
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_USTMA (Cytoplasmic tRNA 2-thiolation protein 1 OS=Ustilago maydis GN=NCS6 PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.668e-53 Identity = 95/139 (68.35%), Postives = 115/139 (82.73%), Query Frame = 2 Query: 233 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649 +LC CN +A L+RPKT +QIC+ECF+ VFE E+H IV N LFK G+R+AIGASGGKDSTVLA + LN R++YGLDLFLLSIDEGI+GYRDDSL+TVKRN+ QY LPLK++ Y +LYGWTMD+IVK +G KNNCT Sbjct: 4 KLCVICNAERAVLRRPKTAQQICKECFFYVFETEVHHTIVSNNLFKRGDRVAIGASGGKDSTVLAHCMKVLNERYDYGLDLFLLSIDEGITGYRDDSLETVKRNQQQYQLPLKVLGYGELYGWTMDDIVKSVGRKNNCT 142
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_KLULA (Cytoplasmic tRNA 2-thiolation protein 1 OS=Kluyveromyces lactis GN=NCS6 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 3.485e-53 Identity = 96/139 (69.06%), Postives = 115/139 (82.73%), Query Frame = 2 Query: 233 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649 +LC C+ RKA +KRPK L++IC+ECF+ VFE EIH IV N LF GERIA+GASGGKDSTVLA+VL LN RH+YG+++ LLSIDEGI GYRDDSL TVKRN++QY LPL+IVSYKDLY WTMDEIV G++N+CT Sbjct: 18 QLCELCHARKAVMKRPKNLQRICKECFFSVFETEIHNTIVSNNLFHRGERIAVGASGGKDSTVLAYVLKLLNDRHDYGVEIVLLSIDEGIVGYRDDSLATVKRNQVQYDLPLEIVSYKDLYNWTMDEIVACAGIRNSCT 156
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_CRYNE (Cytoplasmic tRNA 2-thiolation protein 1 OS=Cryptococcus neoformans GN=NCS6 PE=3 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.014e-52 Identity = 95/138 (68.84%), Postives = 120/138 (86.96%), Query Frame = 2 Query: 239 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIV-GNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649 CS C+ +A +KRPKT +Q+C++CF+EVFE E+H IV G +FK GER+AIGASGGKDSTVLA VLS LN+R++YGLDL+LLSIDEGI+GYRDDSL+TVK+N+ +YGLPLKI+SY +LYGWTMD+IV+ +G KNNCT Sbjct: 6 CSLCHTARALVKRPKTGQQVCKDCFFEVFETEVHNTIVEGEGIFKRGERVAIGASGGKDSTVLAHVLSVLNKRYDYGLDLYLLSIDEGITGYRDDSLETVKQNQAEYGLPLKILSYSELYGWTMDKIVEQVGKKNNCT 143
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_XENTR (Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus tropicalis GN=ctu1 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.259e-52 Identity = 94/137 (68.61%), Postives = 114/137 (83.21%), Query Frame = 2 Query: 239 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCT 649 CS+C +R+A L+RPKT +C++CF+ FEEEIH IV +LF GE++ IGASGGKDSTVLA VL LN R+ YGLDL L+S+DEGISGYRDDSL+TVKRN+ QY LPLKIVSY++LYGWTMD+IVK +GLKNNCT Sbjct: 5 CSSCEERRAVLRRPKTGHSLCKDCFFHAFEEEIHHTIVSAKLFNPGEKVGIGASGGKDSTVLAHVLKVLNERYAYGLDLILVSVDEGISGYRDDSLETVKRNQQQYELPLKIVSYQELYGWTMDQIVKQVGLKNNCT 141
BLAST of DR404094 vs. ExPASy Swiss-Prot
Match: CTU1_SCHPO (Cytoplasmic tRNA 2-thiolation protein 1 OS=Schizosaccharomyces pombe GN=ncs6 PE=1 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 3.853e-52 Identity = 96/140 (68.57%), Postives = 116/140 (82.86%), Query Frame = 2 Query: 233 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY-GWTMDEIVKVIGLKNNCT 649 +LC CN+R+ AL RPKT ++IC+ECFY VFE EIH VI+ N+LF GER+ IGASGGKDSTVLA+V+ LN R++YGL+L+L+S+DEGI GYRDDSL TVKRN+ QYGLP+KIVSY DLY GWTMD +V IG KNNCT Sbjct: 4 KLCQLCNERRPALVRPKTGQKICKECFYYVFETEIHNVIIENKLFVRGERVGIGASGGKDSTVLAYVMKLLNERYDYGLELYLISVDEGIRGYRDDSLDTVKRNQQQYGLPMKIVSYADLYDGWTMDNVVARIGTKNNCT 143 The following BLAST results are available for this feature:
BLAST of DR404094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >DR404094 ID=DR404094; Name=DR404094; organism=Citrus sinensis; type=EST; length=650bpback to top |