DR404088

Overview
NameDR404088
Unique NameDR404088
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12777 contig Csv1_Contig12777:27..757. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR404088 vs. ExPASy Swiss-Prot
Match: BP73_ORYSJ (SAP-like protein BP-73 OS=Oryza sativa subsp. japonica GN=BP-73 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17
Identity = 49/93 (52.69%), Postives = 66/93 (70.97%), Query Frame = 2
Query:  431 NGPILSLSNSPKFQATSTPGPREKEIVELFRKVQVQLRERAAAREDKKTESMQGQRKESETVDSLLKLLRKHSVEQGKRKSSSGSSNDFSLEQ 709
            NGP +SL+++ + QATS PG REKEIVELF++VQ QLR R   +E+KK E  + Q  E  +VDSLL LLRKHSV+Q ++   SG   + S++Q
Sbjct:   93 NGPPISLTSNSRPQATSVPGEREKEIVELFKRVQAQLRARGKGKEEKKPEQAKAQ-GERGSVDSLLNLLRKHSVDQRRK---SGDEKEQSVDQ 181          
The following BLAST results are available for this feature:
BLAST of DR404088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BP73_ORYSJ3.790e-1752.69SAP-like protein BP-73 OS=Oryza sativa subsp. japo... [more]
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Properties
Property NameValue
Genbank descriptionCSAG-PNP1245D24 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone CSAG-PNP1245D24 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR404088 ID=DR404088; Name=DR404088; organism=Citrus sinensis; type=EST; length=731bp
GGGGGAGTTACTATCAAAACTGAAAGAACCAAATTTGAAAAATCATATAA
AATGCAAAAGCTGCTCTAATCTTGTGTCCAATTTCGAGCAAGTGAAAGTG
ATGTCGCAAGCAGTCCATCTCACAGCTAAGAGCCCCCCAGGTTATGGGCC
ATCCGAAGGCAGATGTCTCCCATGTTTGGGTGTTTCCGGAAGAGCAGTGG
CTGTGTCTTCATGCTCTTCTCGTGGTGACTTCAGAATCCTATTCCAGGTC
AAGATTGGAGCAGTGAAATACAGTTCTAAGGGAGCATCATTTGCATGTAG
AGCTAGCTCTGGTAGTTATAGGAGAAATCCTGACTTCTCAAGGCAAAACA
GAAATGGTTACCGAGGCAGGAACAGGCAAAATGAAGAGAGGGATAGCATT
GATGATGAATCTGAACTGTTATCTTCCAGAAATGGGCCTATACTCTCCCT
CTCCAATTCCCCAAAATTCCAAGCAACATCAACTCCAGGACCAAGAGAGA
AGGAGATCGTTGAACTTTTCCGCAAGGTCCAAGTTCAGCTTCGAGAAAGA
GCTGCAGCAAGAGAAGACAAGAAGACTGAATCCATGCAAGGACAACGTAA
AGAGAGTGAAACTGTTGATTCTCTCCTTAAGCTGTTGAGGAAACACTCAG
TTGAGCAAGGTAAAAGGAAGAGCAGCAGTGGCAGCAGCAACGATTTTAGT
TTGGAGCAGGATGAACCAAATGGCTCACATG
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