CX069858

Overview
NameCX069858
Unique NameCX069858
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX069858_ssr32 microsatellite CX069858_ssr32:32..43. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig4313 contig Csv1_Contig4313:1..857. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.889e-41
Identity = 82/178 (46.07%), Postives = 115/178 (64.61%), Query Frame = -2
Query:  305 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 838
            M  +L+ Y GF+G+  +VDVGG  G  + MI+ K+P I +GINFDLP V+ +APS PGV  +GGDMF S+P ADAIFMKW+   W+DD C  +++NCY+ALPA GK+I  E +LP+  + S  T++ + GDI +M  +   GK RTE++F+ L     F   R     Y   ++EF K
Sbjct:  184 MKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSI-KGINFDLPHVIRDAPSYPGVEQVGGDMFVSVPKADAIFMKWICHDWSDDHCIKLLKNCYEALPANGKVIIVECILPEAPDTSAATKSKVHGDI-IMLAHNPGGKERTEKDFEALANWGWFSRFRKVCCAYHTWVMEFNK 359          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.427e-40
Identity = 83/182 (45.60%), Postives = 112/182 (61.54%), Query Frame = -2
Query:  305 SVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 850
            SV     +LD Y GF+GV  LVDVGG  G  L  I  +HP I  G+NFDLP V++EAP  PGV H+GGDMF S+PA DAI MKW+L  W+D  C  +++NCY ALP  GK+I  E VLP ++  + + + +   D+ +M  +   GK R E+EF++L   AGF   +A Y+      +EF K
Sbjct:  185 SVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHI-SGVNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDM-IMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 364          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.406e-40
Identity = 81/163 (49.69%), Postives = 110/163 (67.48%), Query Frame = -2
Query:  350 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLR 838
            M  +L+ Y GF+G+K +VDVGG  G  L MI+ K+P I +GINF+LP VV +APS  GV H+GGDMF S+P  DAIFMKW+   W+DD C+ +++NCY+ALP  GK+I  E VLP+  + S  T+ ++  D+ VM  +   GK RTE+EF+ L   AGF   R
Sbjct:  175 MKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTI-KGINFELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDV-VMLAHNPGGKERTEKEFEALAKGAGFKEFR 335          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.060e-40
Identity = 80/178 (44.94%), Postives = 114/178 (64.04%), Query Frame = -2
Query:  305 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 838
            M  +L+ Y GF+G+K LVDVGG  G  +  I+ K+P I +GINFDLP V+ +APS PGV H+GGDMF SIP ADA+FMKW+   W+D+ C   ++NCY+ALP  GK+I  E +LP   + S  T+ ++  D+ +M  +   GK RT++EF+ L   AGF   +     +   ++EF K
Sbjct:  188 MKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDV-IMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 9.221e-40
Identity = 81/178 (45.51%), Postives = 113/178 (63.48%), Query Frame = -2
Query:  305 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 838
            M  +L+ Y GF+G+  +VDVGG  G  + MI+ K+P I +GINFDL  V+ +AP+ PGV H+G DMF S+P ADAIFMKW+   W+D+ C   ++NCY+ALPA GK++  E +LP+  + S  T+  +  DI VM  +   GK RTE+EF+ L   AGF   R     Y   ++EF K
Sbjct:  184 MKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSI-KGINFDLSHVIEDAPAYPGVEHVGRDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPANGKVLVAECILPETPDTSAATKNAVHVDI-VMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.054e-39
Identity = 81/178 (45.51%), Postives = 111/178 (62.36%), Query Frame = -2
Query:  305 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 838
            M  +L+ Y GF G+K +VDVGG  G  L MI+ K+P I +GINFDLP V+ +APS PGV H+GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E VLP+  +    T+ ++  D+ +M  +   GK RTE+EF+ L  +AGF         Y   ++E  K
Sbjct:  186 MKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDV-IMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.977e-39
Identity = 79/178 (44.38%), Postives = 110/178 (61.80%), Query Frame = -2
Query:  305 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 838
            M  V   Y GF+G+  LVDVGG  G  L MIL K+P I   INFDLP V+ +AP  PG+ H+GGDMF S+P  DAIFMKW+   W+D+ C  +++NCY ALP  GK+I  E +LP+  + S  T+ ++  D+ +   +   GK RTE+EF+ L  +AGF   + F   +   ++EF K
Sbjct:  164 MKKVFQAYQGFQGLTSLVDVGGGTGATLTMILSKYPTI-RCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDV-ITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.019e-38
Identity = 79/178 (44.38%), Postives = 110/178 (61.80%), Query Frame = -2
Query:  305 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 838
            M  V   Y GF+G+  LVDVGG  G  L MIL K+P I   INFDLP V+ +AP  PG+ H+GGDMF S+P  DAIFMKW+   W+D+ C  +++NCY ALP  GK+I  E +LP+  + S  T+ ++  D+ +   +   GK RTE+EF+ L  +AGF   + F   +   ++EF K
Sbjct:  164 MKKVFQTYQGFQGLTSLVDVGGGTGATLTMILSKYPTI-RCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDV-ITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.019e-38
Identity = 77/178 (43.26%), Postives = 115/178 (64.61%), Query Frame = -2
Query:  305 MTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 838
            M  +L+ Y GF+G+  LVDVGG  G  L+MI+ K+P + +GINFDLP V+ +APS PG+ H+GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY++LP  GK+I  E +LP+  + S  T+ ++  D  +M  +   GK RTE+EF+ L  ++GF  ++     +   L+E  K
Sbjct:  186 MKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNL-KGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDC-IMLAHNPGGKERTEKEFEALAKASGFKGIKVVCDAFGVNLIELLK 361          
BLAST of CX069858 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.019e-38
Identity = 83/182 (45.60%), Postives = 110/182 (60.44%), Query Frame = -2
Query:  305 SVPFMTSVLDGYDGFKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 850
            SV     +L+ Y GF+GV  LVDVGG  G  L  I   HP I +GINFDLP V++EAP  PGV H+GGDMFKS+PA DAI MKW+L  W+D  C  +++NCY ALP  GK+I  E VLP ++    + + +   D+ +M  +   G+ R E+EF  L   AGF   +A Y+      +EF K
Sbjct:  183 SVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQI-KGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDM-IMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIEFIK 362          
The following BLAST results are available for this feature:
BLAST of CX069858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
COMT1_CAPCH4.889e-4146.07Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_MAIZE2.427e-4045.60Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_COFCA5.406e-4049.69Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_MEDSA7.060e-4044.94Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_CAPAN9.221e-4045.51Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_OCIBA2.054e-3945.51Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
OMT1_CHRAE5.977e-3944.38Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
OMT2_CHRAE1.019e-3844.38Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_ARATH1.019e-3843.26Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_SACOF1.019e-3845.60Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13C08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13C08-E15-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069858 ID=CX069858; Name=CX069858; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTTTAGTAGGAAATTAAATTTACTAAAAAGAAAGAAAGCAAACGA
CAAAGGAAAAAGAAATACATATCTATGAGATATGAGTTCAATGGAGTGAG
CTCAATATACAAAATACATGTCTATGAAATATGAGCTCAATAATTTATGT
TAATGATAAATCGTTTCTTTTTTTTTTTTGGTAGGCAGCTAGCGCTAACC
GCCTACTCAACATTTATAATTCATAGCAAGTTATTCCATCCTAGGCAACC
ACAGTCCATCACAAATATTCCCCAAGTCTTTTAAGGATCCAGAAACTAAA
ATTACTTTTGGAACTCAAGAAGAGTGTGAAAATAATCGACATAAAAAGCT
CTCAAGTGTGGAAAACCAGCAGAGAGACCAAGTTGCTTAAACTCTTGTTC
AGTCCTGTGTTTACCTTTGGCCCTGTAGATGGTCATTACAAAAATGTCCC
CTTCTAAGAGAGCACGCGTCCTCTGACTCTCGTTTGAATCATCAGGCAGC
ACGGGCTCACAAGCAATCAGTTTTCCTCCTGCCGGAAGAGCCTTGTAACA
GTTCTCCATTATCAGCTTGCATTCATCGTCAGTCCATGTAGTTAAAACCC
ACTTCATAAAGATAGCATCAGCGGCAGGAATGGACTTAAACATGTCCCCA
CCAATATGGGTCACTCCAGGGATACTTGGAGCTTCGGCAACAACCTCAGG
CAAATCAAAATTGATCCCTTCACATATAAAAGGATGTTTCTGTAATATCA
TCCTCAGGCAATCACCTGCACTCCCACCCACATCAACCAATCGCTTCACA
CCTTTGAACCCATCGTAACCGTCCAAAACGGACGTCATGAACGGCACGGA
CACTCCC
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