CX069842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_CITSI (Putative membrane protein ycf1 OS=Citrus sinensis GN=ycf1-A PE=3 SV=1) HSP 1 Score: 540.806 bits (1392), Expect = 3.338e-153 Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 811 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL Sbjct: 1507 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 1776
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_GOSHI (Putative membrane protein ycf1 OS=Gossypium hirsutum GN=ycf1 PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 1.931e-84 Identity = 161/270 (59.63%), Postives = 200/270 (74.07%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 811 I+P +K+ L N+++EE E +G SDAQKQ SVLSNQEKD EE+Y SD K R KKKQ K TE +LDFFLKRYL QLRW S ++I+N+++VYC L+RLINP+++ I+SIQRGEM+L IL+ +K L+EL K G+LII+P RLSVKNDGQF LYQ + I LVHKNK +I +RYQEK Y+DK F EFIA+HQKMT N++KNHYDL VPE IL P RRELR I FNS+++NGM +N VF NN K G+VL KNK+L Sbjct: 1572 IAPNEKQIIGLENRNQEEKEPIGEGGLVSDAQKQGNFKSVLSNQEKDVEEDYDKSDKKKRRKKKQYKSNTEAELDFFLKRYLRFQLRWDD--SLNQRIINNIKVYCLLLRLINPNEIVISSIQRGEMNLDILMIQKDLTLRELMKKGILIIDPVRLSVKNDGQFILYQTISILLVHKNKHQINQRYQEKNYIDKNHFYEFIARHQKMTENKDKNHYDLFVPENILSPNHRRELRIRISFNSRDKNGMHRNAVFLNNVKNCGQVLTKNKHL 1839
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_GOSBA (Putative membrane protein ycf1 OS=Gossypium barbadense GN=ycf1 PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 1.931e-84 Identity = 161/270 (59.63%), Postives = 200/270 (74.07%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 811 I+P +K+ L N+++EE E +G SDAQKQ SVLSNQEKD EE+Y SD K R KKKQ K TE +LDFFLKRYL QLRW S ++I+N+++VYC L+RLINP+++ I+SIQRGEM+L IL+ +K L+EL K G+LII+P RLSVKNDGQF LYQ + I LVHKNK +I +RYQEK Y+DK F EFIA+HQKMT N++KNHYDL VPE IL P RRELR I FNS+++NGM +N VF NN K G+VL KNK+L Sbjct: 1569 IAPNEKQIIGLENRNQEEKEPIGEGGLVSDAQKQGNFKSVLSNQEKDVEEDYDKSDKKKRRKKKQYKSNTEAELDFFLKRYLRFQLRWDD--SLNQRIINNIKVYCLLLRLINPNEIVISSIQRGEMNLDILMIQKDLTLRELMKKGILIIDPVRLSVKNDGQFILYQTISILLVHKNKHQINQRYQEKNYIDKNHFYEFIARHQKMTENKDKNHYDLFVPENILSPNHRRELRIRISFNSRDKNGMHRNAVFLNNVKNCGQVLTKNKHL 1836
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_EUCGG (Putative membrane protein ycf1 OS=Eucalyptus globulus subsp. globulus GN=ycf1 PE=3 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 1.135e-76 Identity = 152/266 (57.14%), Postives = 192/266 (72.18%), Query Frame = -2 Query: 5 QKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLL-VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKN 799 +K+ EL N+++EE E A + SDAQ Q LGS+ SNQEKD E+Y SDMK R KKK+ K TEV+L FFLKRYL +QLRW S ++++N++++YC L+RLINP ++AI+SIQRGEMSL ILIT+K L EL K G+LIIEP RLS+KNDGQ +YQ + I+L HK+K KI + Y+EK YV K + D+ IA+H KM NR KN YDLL VPE +L KRRRELR ICFNS+ +NG+ KNPVF NN K G LDK K+ Sbjct: 1562 EKKSIELENRNQEEKESAIRDNLESDAQNQANLGSLFSNQEKDIGEDYASSDMKKRRKKKEYKSNTEVELYFFLKRYLRIQLRWDD--SLNQRMINNIKIYCLLLRLINPREIAISSIQRGEMSLDILITQKDLTLTELMKKGILIIEPIRLSIKNDGQLIMYQSLNISLFHKSKPKINQIYREKSYVAKINLDKSIARHPKMAENRYKNDYDLLFVPEKVLSTKRRRELRIRICFNSRKRNGIHKNPVFCNNVKNWGEFLDKRKH 1825
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_VITVI (Putative membrane protein ycf1 OS=Vitis vinifera GN=ycf1 PE=3 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 4.767e-75 Identity = 150/274 (54.74%), Postives = 196/274 (71.53%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSD--MKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTK--GGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 811 IS +K+ +L N+++EE E A Q SD Q Q L SVLSN EKD EE+Y GSD M+ R KKKQ K TE +LD FLKRYL QLRW S +K++N+++VYC L+RLINP ++ I++IQRGEMSL ++ K L EL K G+ IIEP RLSVKNDGQF +YQ +GI+LVHK+K + +RY+E+ YVD K+ D+F A+ QKM GN++KNHYDLLVPE IL P+RRR+ R LICFN +N++G+ +NPVF NG + LD+NK+L Sbjct: 1567 ISSNEKKLLKLENRNQEEKESAGQVDLGSDVQNQGNLESVLSNHEKDIEEDYAGSDSDMQKRTKKKQFKNHTEAELDLFLKRYLLFQLRWDD--SLNQKMINNIKVYCLLLRLINPREICISAIQRGEMSLDLIPVHKDLTLTELMKMKRGIFIIEPIRLSVKNDGQFIMYQTIGISLVHKSKYQTNQRYREERYVDNKNCDKFSARCQKMIGNKDKNHYDLLVPENILSPRRRRKFRILICFNLRNRSGVARNPVFC-NGNSCNKFLDENKHL 1837
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_BUXMI (Putative membrane protein ycf1 OS=Buxus microphylla GN=ycf1-A PE=3 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.062e-74 Identity = 147/269 (54.65%), Postives = 192/269 (71.38%), Query Frame = -2 Query: 2 TQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNG--KGGGRVLDKNKNL 802 T+K+ EL N+++EE E QG SDAQ LG VLSNQ+KD EE+Y GS++K R KKKQ TE +L+F LKRYL QLRW F ++++N+++VYC L+RLINP +++I+SIQ GEMS I+ +K + EL K G+LIIEP RLS+K DGQF +YQ + I+LVHKNK++ R +EK YVDK FDE IA+H+KM G ++NHY+LLVPE I P+RRRELR ICFNS N+N + +NPVFFN K GR LD+NK+L Sbjct: 1542 TEKKSIELENRNQEEKETRGQGDLGSDAQNHGNLGYVLSNQQKDVEEDYAGSNIKKRRKKKQCTSNTEAELNFLLKRYLLFQLRWDDP--FNQRMINNIKVYCLLLRLINPKEISISSIQSGEMSPDII--QKDLTITELIKKGLLIIEPVRLSIKRDGQFIMYQTISISLVHKNKQQTNGRCREKRYVDKNYFDESIARHEKMVGTGDENHYELLVPENISSPRRRRELRIRICFNSGNKNFVDRNPVFFNENKVKHCGRFLDENKHL 1806
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_PLAOC (Putative membrane protein ycf1 OS=Platanus occidentalis GN=ycf1 PE=3 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 3.198e-71 Identity = 141/278 (50.72%), Postives = 193/278 (69.42%), Query Frame = -2 Query: 2 QKEYFELSNQSKEENELADQGTPRSDAQKQVILG----------SVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKNL 799 +K+ EL N+++EE E + QG S+AQ Q LG SVL NQ+K+ EE+Y GSD+K KKKQ K + EV+LD LK+YL QLRW G S ++ILN++++YC L+RLINP ++ I+SIQ+GEMSL I++ K+ EL K G+ IIEP RLS+K DGQF +YQ +GI+LVHK+K + +RY+EK +DK F+ FIA+H+ M GN ++NHYDLLVPE I P+RRRELR L CF+ N N + +NPVF NN K G+ L+++K+L Sbjct: 1585 KKKSLELENRNQEEKESSSQGDLGSNAQNQGNLGPNAQNQGNLGSVLPNQQKNLEEDYAGSDIKKVRKKKQFKSKAEVELDLLLKKYLLFQLRWNG--SLNQRILNNIKIYCFLLRLINPKEITISSIQKGEMSLGIMLIKRDLTFTELIKRGIFIIEPVRLSIKWDGQFIMYQTIGISLVHKSKHQTNQRYREKRCIDKNHFEGFIARHENMLGNGDENHYDLLVPENISSPRRRRELRILTCFHFLNGNVLDRNPVFCNGNNVKNCGQFLNEDKHL 1860
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_MORIN (Putative membrane protein ycf1 OS=Morus indica GN=ycf1 PE=3 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 4.176e-71 Identity = 144/268 (53.73%), Postives = 186/268 (69.40%), Query Frame = -2 Query: 8 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNK 811 I +K+Y EL Q++ E E ++D + S LSNQEKD EENY S MK KKQS+ E + DF LKRYL QLRW S +K++++++VYC L+R IN ++ IASIQRGE++L +L+ +K F L EL K G+L+IEP RLS KN+GQF +YQ +GI+LVHK+K I +RY+EKG VD K+FDEFI+KHQKMT NR+KNHYDL VPETIL P+ RRELR LICFNS+N+NG+ N F N K VL+K+K Sbjct: 1552 IFSNEKKYLELEKQNQVEKEYGI----KTDFE------STLSNQEKDIEENYAVSKMKKN--KKQSRTNMEAEFDFLLKRYLLFQLRWDD--SLNKKMIDNIKVYCSLLRPINLREITIASIQRGEINLDLLMIQKNFILTELIKKGILLIEPVRLSRKNEGQFIMYQTIGISLVHKSKHTINQRYREKGLVDTKNFDEFISKHQKMTENRDKNHYDLFVPETILSPRHRRELRILICFNSRNRNGIPSNAFFCNENKVKSPVLNKSK 1805
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_CALFG (Putative membrane protein ycf1 OS=Calycanthus floridus var. glaucus GN=ycf1 PE=3 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.215e-70 Identity = 143/272 (52.57%), Postives = 190/272 (69.85%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKNL 811 IS QK+Y EL N+++EE E QG SD Q NQ+KD E++Y SD+K R KK+QSK +L FFLKRYL QLRW ++ ++++N+++VYC L+RLINP ++AI+SIQRGEM L +++ +K L EL K G+LIIEP RLS+K DGQF +YQ +GI+LVHKNK + +RY+EK YVD+ FD IA+H KM NR +N YDLLVPE IL P+RRRELR LI FNS N+N + +N VFF NN K G+ LD++K++ Sbjct: 1515 ISSNQKDYLELENRNQEEKEEFGQGNLGSDTQ----------NQQKDVEKDYAKSDIKKRGKKRQSKSNKGAELQFFLKRYLLFQLRWDDPLN--QRMMNNVKVYCLLLRLINPREIAISSIQRGEMRLDVMLIQKDLTLTELIKRGILIIEPVRLSIKWDGQFIMYQTIGISLVHKNKHQTNRRYREKRYVDENYFDGSIAQHGKMLVNRAENDYDLLVPENILSPRRRRELRILISFNSGNRNVVDRNLVFFNGNNVKNFGQFLDEDKHI 1774
BLAST of CX069842 vs. ExPASy Swiss-Prot
Match: YCF1_DRIGR (Putative membrane protein ycf1 OS=Drimys granadensis GN=ycf1 PE=3 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 3.535e-70 Identity = 138/272 (50.74%), Postives = 189/272 (69.49%), Query Frame = -2 Query: 2 ISPTQKEYFELSNQSKEENELADQGTPRSDAQKQVILGSVLSNQEKDGEENYTGSDMKTRIKKKQSKRETEVQLDFFLKRYLCLQLRWRGAVSFREKILNDMQVYCHLVRLINPSDVAIASIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKNL 811 IS QKEY EL N++KE+ E QG RSDA+ Q L S N++K E++Y SD+K R KK++ K E +L+FFLKRYL QLRW S ++++N+++VYC L+RLINP ++AI+SIQRGEM L +++ K L EL K G+ IIEP RLS+K DGQF +YQ +GI+L+HK+K + + +EK YVD+ FD IA+H KM N ++NHYDLL+ E IL P+RRR LR L+CFNS N+N + NP+FF NN + G+ LD++K L Sbjct: 1536 ISSNQKEYLELENRNKEK-EQPGQGDIRSDARNQENLESDAQNKKKYVEKDYAESDIKKRRKKRKYKSNKEAELEFFLKRYLLFQLRWDD--SLNQRMINNIKVYCLLLRLINPREIAISSIQRGEMRLDVMLIHKDLTLTELIKRGIFIIEPARLSIKRDGQFIMYQTIGISLIHKSKHQTNRECREKKYVDENSFDGSIAQHGKMLVNGDENHYDLLISENILSPRRRRNLRILMCFNSSNENIVDINPIFFNENNVRNSGQFLDEDKCL 1804 The following BLAST results are available for this feature:
BLAST of CX069842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069842 ID=CX069842; Name=CX069842; organism=Citrus sinensis; type=EST; length=812bpback to top |