CX069809
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069809 vs. ExPASy Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 4.201e-66 Identity = 119/209 (56.94%), Postives = 160/209 (76.56%), Query Frame = 3 Query: 45 SLMFAMICTRSDIAQAVGAVSRYMANPGGEHWITVKRILRYIRGTSDVALCYGGSEFTVRGYVDSDFAGDLDKRKSTTGYVFALAGAAISWVSKLQTVVALSTTEAEYMAATQACKEAIWIQRLLEELGHKQQKIPVFCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGSVDLQKIHTKENLADVLTKPINADKFIWSRSSCGL 671 SLM+AM+CTR DIA AVG VSR++ NPG EHW VK ILRY+RGT+ LC+GGS+ ++GY D+D AGD+D RKS+TGY+F +G AISW SKLQ VALSTTEAEY+AAT+ KE IW++R L+ELG Q++ V+CDSQSA+ +++N +H+RTKHI V+YH++RE+V+D S+ + KI T EN AD+LTK + +KF + G+ Sbjct: 1117 SLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325
BLAST of CX069809 vs. ExPASy Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 3.827e-43 Identity = 93/215 (43.26%), Postives = 135/215 (62.79%), Query Frame = 3 Query: 48 LMFAMICTRSDIAQAVGAVSRYMANPGGEHWITVKRILRYIRGTSDVALCYGGS---EFTVRGYVDSDFAGDLDKRKSTTGYVFALAGA-AISWVSKLQTVVALSTTEAEYMAATQACKEAIWIQRLLEELGHK-QQKIPVFCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGSVDLQKIHTKENLADVLTKPINADKFIWSRSSCGLAE 677 LM+ M+CTR D+ AV +SRY + E W +KR+LRY++GT D+ L + + E + GYVDSD+AG RKSTTGY+F + I W +K Q VA S+TEAEYMA +A +EA+W++ LL + K + I ++ D+Q + IA NP+ H R KHI ++YHF RE V++ + L+ I T+ LAD+ TKP+ A +F+ R GL + Sbjct: 1188 LMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGLLQ 1402
BLAST of CX069809 vs. ExPASy Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.193e-13 Identity = 44/113 (38.94%), Postives = 61/113 (53.98%), Query Frame = 3 Query: 69 TRSDIAQAVGAVSRYMANPGGEHWITVKRILRYIRGTSDVAL-CYGGSEFTVRGYVDSDFAGDLDKRKSTTGYVFALAGAAISWVSKLQTVVALSTTEAEYMAATQACKEAIW 404 TR DI+ AV V + M P + +KR+LRY++GT L + S+ V+ + DSD+AG R+STTG+ L ISW +K Q V+ S+TE EY A E W Sbjct: 113 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of CX069809 vs. ExPASy Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae GN=TY5A PE=4 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.675e-12 Identity = 43/118 (36.44%), Postives = 65/118 (55.08%), Query Frame = 3 Query: 48 LMFAMICTRSDIAQAVGAVSRYMANPGGEHWITVKRILRYIRGTSDVALCY-GGSEFTVRGYVDSDFAGDLDKRKSTTGYVFALAGAAISWVS-KLQTVVALSTTEAEYMAATQACKE 395 L+F R DI+ V +SR++ P H + +R+LRY+ T + L Y GS+ + Y D+ D ST GYV LAGA ++W S KL+ V+ + +TEAEY+ A++ E Sbjct: 190 LLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYITASETVME 307 The following BLAST results are available for this feature:
BLAST of CX069809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069809 ID=CX069809; Name=CX069809; organism=Citrus sinensis; type=EST; length=830bpback to top |