CX069807

Overview
NameCX069807
Unique NameCX069807
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length535
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3314 contig Csv1_Contig3314:18..552. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX069807 vs. ExPASy Swiss-Prot
Match: NO93_SOYBN (Early nodulin-93 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.455e-31
Identity = 77/107 (71.96%), Postives = 77/107 (71.96%), Query Frame = -3 
Query:  144 MAKNVAQSPLERTSLASLDHKLAMAKRCSHEXXXXXXXXXXXXXXXXXIPTLASVRMLPWARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASNMEA 464
            MAK    SPLER SLASLD KLA AKRCSHE                 IPTLASVRMLPWARANLNHTAQALIIST   AAYFIVADKTVLATARKNSF Q SN EA
Sbjct:    1 MAKG--NSPLERPSLASLDQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPWARANLNHTAQALIISTATAAAYFIVADKTVLATARKNSFNQPSNSEA 105
The following BLAST results are available for this feature:
BLAST of CX069807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NO93_SOYBN1.455e-3171.96Early nodulin-93 OS=Glycine max PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_12H08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12H08-P16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069807 ID=CX069807; Name=CX069807; organism=Citrus sinensis; type=EST; length=535bp
CTTTTTTTTTTTGGAATGGAAACCCATCTTTTATTTATACGTAGATAACG
GATATACATCCTAAGTTGGTTATTGGAATATGATGATAACGCAGTACAAC
ATAAGCGAATCATATAATCATTTAATTAGCAATTCAAAACCTATGCTTCC
ATGTTAGAGGCTTGCTGGAAGGAGTTTTTTCGTGCTGTGGCCAGAACTGT
CTTGTCAGCCACAATGAAATATGCCGCTCCAGCCACTGTTGAGATAATAA
GAGCTTGAGCAGTGTGATTGAGGTTGGCTCTAGCCCAAGGAAGCATCCTC
ACACTCGCGAGCGTTGGAATGGCAGTAGCAACCGTAGCAACAACAGCTGC
CTTAGCTCCCGCAATTACACCCTCATGAGAGCAACGCTTAGCCATAGCCA
GTTTATGGTCAAGTGAAGCCAAGCTGGTCCTTTCAAGAGGAGACTGAGCT
ACATTCTTTGCCATTGTTTGAGAAAGTTAAAATGGAGAATATGTTAATAA
TGAGCTGAGGAAATTGACGAGGCTGTGTTATACCT
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