CX069797

Overview
NameCX069797
Unique NameCX069797
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX069797 vs. ExPASy Swiss-Prot
Match: Y4158_ARATH (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13
Identity = 43/103 (41.75%), Postives = 59/103 (57.28%), Query Frame = 1 
Query:  304 FFREILAFTIDDKELMLPPRFVKIFGDELSFDATITKS*C*CFTSRYYKR*RK---------FGDGWNEFLECHSICFGYKILFQYRKNSNFHVVIFGIDNCE 585
            FF+ +L  T+ DK + +PPRFVK+ G +LS   T+        T   YKR  K         F +GW+EF E HSI  G+ +LF+Y+KNS+F V+IF    CE
Sbjct:   30 FFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLV-------TPAGYKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACE 125
[Close]
BLAST of CX069797 vs. ExPASy Swiss-Prot
Match: Y3896_ARATH (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana GN=At3g18960 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.441e-12
Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 1 
Query:  304 FFREILAFTIDDKELMLPPRFVKIFGDELSFDATITKS*C*CFTSRYYKR*RK---------FGDGWNEFLECHSICFGYKILFQYRKNSNFHVVIFGIDNCE 585
            FF+ +L  T+ DK + +PPRFVK+ G +LS   T+        T   +KR  K         F +GW+EF E HSI  G+ +LF+Y++NS+F V+IF +  CE
Sbjct:   30 FFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLE-------TPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACE 125
The following BLAST results are available for this feature:
BLAST of CX069797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y4158_ARATH3.793e-1341.75B3 domain-containing protein At4g01580 OS=Arabidop... [more]
Y3896_ARATH1.441e-1239.81B3 domain-containing protein At3g18960 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_12G12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12G12-N24-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069797 ID=CX069797; Name=CX069797; organism=Citrus sinensis; type=EST; length=789bp
CTTGAACTGGCTTTGCCTTTGCTGCTCTCCTACTGCTTAGTTTCAGCTGC
CTTCAGCAACCCCATATGCCCAAACTGGCAAGGCCTGCTTAACAATTCAG
ACGTAAAGCTACATTTTCAAAGTCAGCAAGACAAAAGAGTTCTTGGAGGG
TAATTTGCAAAATTCCTAACTTTTAGCTTAAATTTTATGTCTAATATCTG
AATTAATGTAATGGGTTTGCTTTCTTTATTAAAAAGAAATATTTAAGCTA
AAAGTTGAGCAGAACTCATGATGTCCAGTTCCATGGAGGAGGAACCTTTT
CTTTTTTTCAGGGAGATCCTTGCCTTCACCATTGATGATAAAGAACTGAT
GCTTCCACCAAGGTTTGTGAAAATATTTGGGGATGAACTCTCGTTTGATG
CTACAATCACAAAGTCCTAATGCTAATGTTTCACGAGTAGGTATTATAAA
AGATGAAGGAAATTTGGAGACGGTTGGAATGAATTTTTGGAATGTCATTC
AATCTGCTTTGGATACAAAATACTGTTCCAATACAGAAAGAATTCAAATT
TCCATGTTGTTATATTTGGTATAGATAACTGTGAGATTTAGCATCTGGAC
CTTAAGATTGATACCACCAAATTCTATAAACCCAAACATTGTGTGAAGGA
TGAGAGCCGAACAGGCATTGTAGGTAAGAGGAAGTTAATATGTCGATACC
AGTACCATGTTTTGTGCAGCAGTGTGTTTACAAATTAATCTCATTCATCA
CTAGCTTTCAAAGTTGACATAAAAATGAGTTGATTGGTT
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