CX069791

Overview
NameCX069791
Unique NameCX069791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10255 contig Csv1_Contig10255:12..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069791 vs. ExPASy Swiss-Prot
Match: PLZ12_LUPPO (Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.380e-53
Identity = 101/156 (64.74%), Postives = 128/156 (82.05%), Query Frame = 2
Query:  407 LDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEINAAARMRLAANEKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSKDVMDMVLVTQYFDTMKEIGASSKTNSVFIPHGPGAV 874
            ++LD  FEQK ++AK+V EELEK M  YGY I   L+VDI PD+ V+RAMNEINAA RM+LA+  K EAEKILQ+KRAE EAE+KYL G+G+ARQRQAI DGLR+++L FS  V GTS+K+VMD++++TQYFDT+K++G SSK  +VFIPHGPG V
Sbjct:    1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQLASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHV 156          
BLAST of CX069791 vs. ExPASy Swiss-Prot
Match: Y1128_SYNY3 (Uncharacterized protein slr1128 OS=Synechocystis sp. (strain PCC 6803) GN=slr1128 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.697e-12
Identity = 67/264 (25.38%), Postives = 124/264 (46.97%), Query Frame = 2
Query:  101 VDQSTVAIKETFGKFDDVLEPGCHCLPWCLGSQVAGQLSLRVQQLDVRCETK-TKDNVFVNVVASVQYRALAEKASDAFYKLSNTRSQIQAYVFDVIRASVPKLDLDATFEQKNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEINAAARMRLAANEKAEAEKILQIKRAEGEAESKYL--------AGLGIARQRQAIVDGLRDSVLAFSENVPGTSS----KDVMDMVLVTQYFDTMKEIGASSKTNSVFI 853
            V++    + E  G ++  L PG +     L   V  Q + R + +D+  ++  TKDNV +   A V +R +      A+YK+ N +S +   V   IR+ + KL+LD TF  + +I + +  EL+ +   +G ++ +  + DI P + V  +M     A R + AA   +E ++   I  A+G+A+++ L        A L    ++Q  V   + +  A S      SS    ++ +  +L  QY +    IG+S  +  +F+
Sbjct:   23 VNEKNEYLVERLGSYNKKLTPGLNFTVPILDRVVFKQTT-REKVIDIPPQSCITKDNVAITADAVVYWRII--DMEKAYYKVENLQSAMVNLVLTQIRSEIGKLELDQTFTARTEINELLLRELDISTDPWGVKVTRVELRDIMPSKAVLDSMELQMTAERKKRAAILTSEGQRDSAINSAQGDAQARVLEAEAKKKAAILNAEAEQQKKVLEAKATAEALSILTEKLSSDNHAREALQFLLAQQYLNMGTTIGSSDSSKVMFL 283          
The following BLAST results are available for this feature:
BLAST of CX069791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PLZ12_LUPPO3.380e-5364.74Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE... [more]
Y1128_SYNY31.697e-1225.38Uncharacterized protein slr1128 OS=Synechocystis s... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_12G09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-12G09-N18-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069791 ID=CX069791; Name=CX069791; organism=Citrus sinensis; type=EST; length=875bp
CTAAAATTAATCTCTCATCTTTCCCTCGTCACTTTCGCAAAATTCGTTTA
GTTAAAAGCTTTAGAATCAGAAAATGGGACAAGCTTTAGGTTGTATTCAG
GTGGATCAGTCAACTGTGGCCATCAAGGAAACCTTTGGGAAGTTTGATGA
TGTGCTTGAACCTGGCTGTCACTGTTTGCCTTGGTGTTTGGGGAGCCAAG
TAGCAGGTCAACTCTCATTACGTGTTCAGCAGTTGGATGTTCGATGTGAA
ACAAAAACCAAGGACAATGTGTTTGTTAATGTGGTTGCTTCCGTTCAATA
CCGAGCCTTGGCAGAGAAGGCTTCAGATGCCTTTTATAAGCTCAGCAATA
CTAGATCGCAGATCCAAGCGTATGTCTTTGATGTTATTAGGGCAAGTGTA
CCAAAGCTGGACCTGGATGCAACCTTTGAGCAGAAGAACGACATAGCCAA
AGCTGTGGAAGAGGAACTCGAAAAGGCCATGTCTCATTATGGTTATGAGA
TAGTTCAGACTCTCATCGTAGATATTGAACCAGATGAACATGTGAAGAGA
GCAATGAATGAGATCAATGCAGCGGCCAGAATGAGGCTGGCTGCAAATGA
GAAAGCGGAAGCAGAGAAAATATTGCAGATCAAGCGTGCTGAAGGAGAAG
CAGAATCAAAGTATTTGGCAGGCCTTGGTATTGCACGTCAGCGTCAGGCC
ATTGTTGATGGCCTGAGGGATAGCGTGCTAGCCTTCTCTGAGAATGTACC
TGGAACATCTTCAAAGGATGTCATGGACATGGTTCTGGTCACCCAGTATT
TTGATACCATGAAGGAAATTGGTGCCTCCTCAAAGACTAACTCTGTGTTC
ATCCCCCATGGACCTGGTGCTGTCA
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